RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 KRT19P08727 400 aa3.84□□□□□ -1.8
APAF1-208ENST00000549007 CCDC192P0DO97 292 aa3.84□□□□□ -1.8
APAF1-208ENST00000549007 TNNI1P19237 187 aa3.84□□□□□ -1.8
APAF1-208ENST00000549007 PTMSP20962 102 aa3.84□□□□□ -1.8
APAF1-208ENST00000549007 CA8P35219 290 aa3.84□□□□□ -1.8
APAF1-208ENST00000549007 CTNNB1P35222 781 aa3.84□□□□□ -1.8
APAF1-208ENST00000549007 SLC11A1P49279 550 aa3.84□□□□□ -1.8
APAF1-208ENST00000549007 ALG11Q2TAA5 492 aa3.84□□□□□ -1.8
APAF1-208ENST00000549007 COL28A1Q2UY09 1125 aa3.84□□□□□ -1.8
APAF1-208ENST00000549007 C1orf220Q5T0J3 134 aa3.84□□□□□ -1.8
APAF1-208ENST00000549007 KIAA0930Q6ICG6 404 aaPredicted RBP3.84□□□□□ -1.8
APAF1-208ENST00000549007 INO80CQ6PI98 192 aaPredicted RBP3.84□□□□□ -1.8
APAF1-208ENST00000549007 PTCHD4Q6ZW05 846 aa3.84□□□□□ -1.8
APAF1-208ENST00000549007 CIR1Q86X95 450 aaPredicted RBP3.84□□□□□ -1.8
APAF1-208ENST00000549007 GDPD5Q8WTR4 605 aa3.84□□□□□ -1.8
APAF1-208ENST00000549007 ARNTL2Q8WYA1 636 aa3.84□□□□□ -1.8
APAF1-208ENST00000549007 CCDC51Q96ER9 411 aa3.84□□□□□ -1.8
APAF1-208ENST00000549007 DHTKD1Q96HY7 919 aaPredicted RBP3.84□□□□□ -1.8
APAF1-208ENST00000549007 FYTTD1Q96QD9 318 aaKnown RBP3.84□□□□□ -1.8
APAF1-208ENST00000549007 PI4K2AQ9BTU6 479 aa3.84□□□□□ -1.8
APAF1-208ENST00000549007 C20orf141Q9NUB4 165 aa3.84□□□□□ -1.8
APAF1-208ENST00000549007 DMAC2Q9NW81 257 aa3.84□□□□□ -1.8
APAF1-208ENST00000549007 TAB2Q9NYJ8 693 aa3.84□□□□□ -1.8
APAF1-208ENST00000549007 RWDD2AQ9UIY3 292 aa3.84□□□□□ -1.8
APAF1-208ENST00000549007 TRAF3IP3Q9Y228 551 aa3.84□□□□□ -1.8
APAF1-208ENST00000549007 FRMD4BQ9Y2L6 1034 aa3.84□□□□□ -1.8
APAF1-208ENST00000549007 URADA6NGE7 173 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 LIPT2A6NK58 231 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 TEX22C9J3V5 150 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 H3BQ06 376 aaPredicted RBP3.83□□□□□ -1.8
APAF1-208ENST00000549007 CETN3O15182 167 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 SLC16A3O15427 465 aaKnown RBP3.83□□□□□ -1.8
APAF1-208ENST00000549007 IL7RP16871 459 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 SLC8A1P32418 973 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 BRCC3P46736 316 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 MTNR1AP48039 350 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 CLCNKBP51801 687 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 CDH8P55286 799 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 GOLGA8FQ08AF8 430 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 TMEM132DQ14C87 1099 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 MFSD13AQ14CX5 517 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 RABL3Q5HYI8 236 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 NUGGCQ68CJ6 796 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 TMEM81Q6P7N7 255 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 Q6ZWC4 215 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 DTX2Q86UW9 622 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 VSIG1Q86XK7 387 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 DHX40Q8IX18 779 aaKnown RBP3.83□□□□□ -1.8
APAF1-208ENST00000549007 GHDCQ8N2G8 530 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 SCAIQ8N9R8 606 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 DNAAF1Q8NEP3 725 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 URGCPQ8TCY9 931 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 SECISBP2LQ93073 1101 aaKnown RBP3.83□□□□□ -1.8
APAF1-208ENST00000549007 CNOT6LQ96LI5 555 aaKnown RBP3.83□□□□□ -1.8
APAF1-208ENST00000549007 RAD9AQ99638 391 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 TMEM117Q9H0C3 514 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 ZCWPW1Q9H0M4 648 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 TSPY26PQ9H489 355 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 CWH43Q9H720 699 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 SYNPO2LQ9H987 977 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 GRPEL1Q9HAV7 217 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 ASNSD1Q9NWL6 643 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 ST6GALNAC2Q9UJ37 374 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.83□□□□□ -1.8
APAF1-208ENST00000549007 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.83□□□□□ -1.8
APAF1-208ENST00000549007 DSCR3O14972 297 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 HCRTO43612 131 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 ITGB3P05106 788 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 TMEM191BP0C7N4 346 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 EPB41P11171 864 aaKnown RBP3.83□□□□□ -1.8
APAF1-208ENST00000549007 ZFXP17010 805 aaPredicted RBP3.83□□□□□ -1.8
APAF1-208ENST00000549007 MTIF2P46199 727 aaKnown RBP3.83□□□□□ -1.8
APAF1-208ENST00000549007 SLC25A3Q00325 362 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 FKBP3Q00688 224 aaKnown RBP3.83□□□□□ -1.8
APAF1-208ENST00000549007 TAP1Q03518 808 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 KPNB1Q14974 876 aaKnown RBP3.83□□□□□ -1.8
APAF1-208ENST00000549007 NAB2Q15742 525 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 SPOPLQ6IQ16 392 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 KLHL35Q6PF15 583 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 ALKAL1Q6UXT8 129 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 SCARA5Q6ZMJ2 495 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 POLNQ7Z5Q5 900 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 TMEM200AQ86VY9 491 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 HACE1Q8IYU2 909 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 LRRC43Q8N309 656 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 SIRT6Q8N6T7 355 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 AKAP1Q92667 903 aaKnown RBP eCLIP3.83□□□□□ -1.8
APAF1-208ENST00000549007 ZNF689Q96CS4 500 aaPredicted RBP3.83□□□□□ -1.8
APAF1-208ENST00000549007 ELMOD3Q96FG2 381 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 ZNF764Q96H86 408 aaPredicted RBP3.83□□□□□ -1.8
APAF1-208ENST00000549007 FNBP1Q96RU3 617 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 BAG1Q99933 345 aaPredicted RBP3.83□□□□□ -1.8
APAF1-208ENST00000549007 CRACR2AQ9BSW2 395 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 SERHL2Q9H4I8 314 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 SLCO3A1Q9UIG8 710 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 INSL6Q9Y581 213 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 GBF1Q92538 1859 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 BICDL2A1A5D9 508 aa3.83□□□□□ -1.8
APAF1-208ENST00000549007 OTOL1A6NHN0 477 aaPredicted RBP3.83□□□□□ -1.8
APAF1-208ENST00000549007 LINC00271P0C7V0 271 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms