RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 C17orf99Q6UX52 265 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 ARMCX6Q7L4S7 300 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 TFAP2DQ7Z6R9 452 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 SYVN1Q86TM6 617 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 RTL3Q8N8U3 475 aaKnown RBP13.59□□□□□ -0.23
HDAC7-228ENST00000548938 DCBLD1Q8N8Z6 715 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 C3orf58Q8NDZ4 430 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 BRINP2Q9C0B6 783 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 TSPYL2Q9H2G4 693 aaPredicted RBP13.59□□□□□ -0.23
HDAC7-228ENST00000548938 EXD2Q9NVH0 621 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 OSER1Q9NX31 292 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 MTRRQ9UBK8 725 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 ZNF225Q9UK10 706 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 GIT1Q9Y2X7 761 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 GPC6Q9Y625 555 aaPredicted RBP13.59□□□□□ -0.23
HDAC7-228ENST00000548938 NCF1BA6NI72 391 aaPredicted RBP13.59□□□□□ -0.23
HDAC7-228ENST00000548938 C16orf96A6NNT2 1141 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 NCF1CA8MVU1 366 aaPredicted RBP13.59□□□□□ -0.23
HDAC7-228ENST00000548938 KDM1AO60341 852 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 GOT2P00505 430 aaKnown RBP13.59□□□□□ -0.23
HDAC7-228ENST00000548938 PRSS56P0CW18 603 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 RAP2AP10114 183 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 NCF1P14598 390 aaPredicted RBP13.59□□□□□ -0.23
HDAC7-228ENST00000548938 NFKBIAP25963 317 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 LHX1P48742 406 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 AGTR2P50052 363 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 YWHAHQ04917 246 aaPredicted RBP13.59□□□□□ -0.23
HDAC7-228ENST00000548938 CD47Q08722 323 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 EIF4EBP2Q13542 120 aaPredicted RBP13.59□□□□□ -0.23
HDAC7-228ENST00000548938 XKR7Q5GH72 579 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 UGT3A1Q6NUS8 523 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 IFNL1Q8IU54 200 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 ZDHHC13Q8IUH4 622 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 HID1Q8IV36 788 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 RHEBL1Q8TAI7 183 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 ZNF641Q96N77 438 aaPredicted RBP13.59□□□□□ -0.23
HDAC7-228ENST00000548938 HERC2P3Q9BVR0 1158 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 PAK1IP1Q9NWT1 392 aaPredicted RBP13.59□□□□□ -0.23
HDAC7-228ENST00000548938 RNF112Q9ULX5 631 aa13.59□□□□□ -0.23
HDAC7-228ENST00000548938 CEP350Q5VT06 3117 aa13.58□□□□□ -0.23
HDAC7-228ENST00000548938 E9PAM4 449 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 SNX2O60749 519 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 TULP3O75386 442 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 GJB3O75712 270 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 UGT2B4P06133 528 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 PLIN5Q00G26 463 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 LAPTM5Q13571 262 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 DNASE1L3Q13609 305 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 TTC23Q5W5X9 447 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 SLCO6A1Q86UG4 719 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 PROKR1Q8TCW9 393 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 TFB2MQ9H5Q4 396 aaKnown RBP13.58□□□□□ -0.24
HDAC7-228ENST00000548938 UXTQ9UBK9 157 aaPredicted RBP13.58□□□□□ -0.24
HDAC7-228ENST00000548938 UTS2RQ9UKP6 389 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 TMED5Q9Y3A6 229 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 ARL5AQ9Y689 179 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 FAM234BA2RU67 622 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 PTGES3LE9PB15 166 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 G3V2T6 193 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 ENPP3O14638 875 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 CD3EAPO15446 510 aaKnown RBP13.58□□□□□ -0.24
HDAC7-228ENST00000548938 KERAO60938 352 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 UGT2B11O75310 529 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 ECI2O75521 394 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 ANXA6P08133 673 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 RPS17P08708 135 aaKnown RBP13.58□□□□□ -0.24
HDAC7-228ENST00000548938 ZNF865P0CJ78 1059 aaPredicted RBP13.58□□□□□ -0.24
HDAC7-228ENST00000548938 SMIM10L2AP0DMW4 78 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 SMIM10L2BP0DMW5 78 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 SUOXP51687 545 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 CLCNKBP51801 687 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 CHRNB3Q05901 458 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 PPP1R8Q12972 351 aaKnown RBP13.58□□□□□ -0.24
HDAC7-228ENST00000548938 TSNQ15631 228 aaKnown RBP13.58□□□□□ -0.24
HDAC7-228ENST00000548938 NKG7Q16617 165 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 FAM98BQ52LJ0 330 aaKnown RBP13.58□□□□□ -0.24
HDAC7-228ENST00000548938 ANKS6Q68DC2 871 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 SULT1C3Q6IMI6 304 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 CASP10Q92851 521 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 HPS1Q92902 700 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 ESAMQ96AP7 390 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 AURKBQ96GD4 344 aaPredicted RBP13.58□□□□□ -0.24
HDAC7-228ENST00000548938 ZNF599Q96NL3 588 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 TMEM209Q96SK2 561 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 WDR12Q9GZL7 423 aaKnown RBP13.58□□□□□ -0.24
HDAC7-228ENST00000548938 ATP13A3Q9H7F0 1226 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 CSNK1G1Q9HCP0 422 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 ITGB1BP2Q9UKP3 347 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 TSC22D4Q9Y3Q8 395 aa13.58□□□□□ -0.24
HDAC7-228ENST00000548938 CCDC162PA2VCL2 907 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 TBC1D4O60343 1298 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 E2F6O75461 281 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 GLP2RO95838 553 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 HPRP00739 348 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 ATXN1LP0C7T5 689 aaKnown RBP13.57□□□□□ -0.24
HDAC7-228ENST00000548938 HAPLN1P10915 354 aaPredicted RBP13.57□□□□□ -0.24
HDAC7-228ENST00000548938 ALDH4A1P30038 563 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 MRPL19P49406 292 aaKnown RBP13.57□□□□□ -0.24
HDAC7-228ENST00000548938 GABARAPL2P60520 117 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 ERVK-8P63133 956 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms