RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 LOC400499M0QZD8 3231 aa11.21□□□□□ -0.61
BEST3-209ENST00000548658 C9orf172C9J069 976 aa11.21□□□□□ -0.61
BEST3-209ENST00000548658 TOX3O15405 576 aaPredicted RBP11.21□□□□□ -0.61
BEST3-209ENST00000548658 MTX2O75431 263 aa11.21□□□□□ -0.61
BEST3-209ENST00000548658 AGTP01019 485 aa11.21□□□□□ -0.61
BEST3-209ENST00000548658 FGF3P11487 239 aaPredicted RBP11.21□□□□□ -0.61
BEST3-209ENST00000548658 CCL4P13236 92 aa11.21□□□□□ -0.61
BEST3-209ENST00000548658 CSF2RBP32927 897 aa11.21□□□□□ -0.61
BEST3-209ENST00000548658 HADHAP40939 763 aa11.21□□□□□ -0.61
BEST3-209ENST00000548658 UBE2IP63279 158 aaKnown RBP11.21□□□□□ -0.61
BEST3-209ENST00000548658 CFHR1Q03591 330 aa11.21□□□□□ -0.61
BEST3-209ENST00000548658 C19orf57Q0VDD7 668 aa11.21□□□□□ -0.61
BEST3-209ENST00000548658 CHRNA6Q15825 494 aa11.21□□□□□ -0.61
BEST3-209ENST00000548658 LONRF2Q1L5Z9 754 aa11.21□□□□□ -0.61
BEST3-209ENST00000548658 MANEAQ5SRI9 462 aa11.21□□□□□ -0.61
BEST3-209ENST00000548658 DCAF12Q5T6F0 453 aa11.21□□□□□ -0.61
BEST3-209ENST00000548658 FAM151BQ6UXP7 276 aa11.21□□□□□ -0.61
BEST3-209ENST00000548658 TMEM26Q6ZUK4 368 aa11.21□□□□□ -0.61
BEST3-209ENST00000548658 AMZ2Q86W34 360 aa11.21□□□□□ -0.61
BEST3-209ENST00000548658 ZNF761Q86XN6 746 aaPredicted RBP11.21□□□□□ -0.61
BEST3-209ENST00000548658 DTX1Q86Y01 620 aa11.21□□□□□ -0.61
BEST3-209ENST00000548658 ZNF547Q8IVP9 402 aa11.21□□□□□ -0.61
BEST3-209ENST00000548658 DDHD1Q8NEL9 900 aa11.21□□□□□ -0.61
BEST3-209ENST00000548658 ZNF398Q8TD17 642 aa11.21□□□□□ -0.61
BEST3-209ENST00000548658 NCSTNQ92542 709 aa11.21□□□□□ -0.61
BEST3-209ENST00000548658 BBC3Q96PG8 261 aaPredicted RBP11.21□□□□□ -0.61
BEST3-209ENST00000548658 ZPBPQ9BS86 351 aa11.21□□□□□ -0.61
BEST3-209ENST00000548658 FICDQ9BVA6 458 aa11.21□□□□□ -0.61
BEST3-209ENST00000548658 TSGA10Q9BZW7 698 aa11.21□□□□□ -0.61
BEST3-209ENST00000548658 WDR70Q9NW82 654 aa11.21□□□□□ -0.61
BEST3-209ENST00000548658 SLC39A1Q9NY26 324 aa11.21□□□□□ -0.61
BEST3-209ENST00000548658 SLC23A2Q9UGH3 650 aa11.21□□□□□ -0.61
BEST3-209ENST00000548658 DNAJC16Q9Y2G8 782 aa11.21□□□□□ -0.61
BEST3-209ENST00000548658 SCN8AQ9UQD0 1980 aa11.2□□□□□ -0.62
BEST3-209ENST00000548658 F5H423 210 aaPredicted RBP11.2□□□□□ -0.62
BEST3-209ENST00000548658 RALBP11234 206 aa11.2□□□□□ -0.62
BEST3-209ENST00000548658 AMD1P17707 334 aa11.2□□□□□ -0.62
BEST3-209ENST00000548658 MSH3P20585 1137 aa11.2□□□□□ -0.62
BEST3-209ENST00000548658 MPSTP25325 297 aa11.2□□□□□ -0.62
BEST3-209ENST00000548658 ADRA1AP35348 466 aa11.2□□□□□ -0.62
BEST3-209ENST00000548658 ETV5P41161 510 aa11.2□□□□□ -0.62
BEST3-209ENST00000548658 ATP1A2P50993 1020 aa11.2□□□□□ -0.62
BEST3-209ENST00000548658 DMPKQ09013 629 aa11.2□□□□□ -0.62
BEST3-209ENST00000548658 PARP6Q2NL67 630 aa11.2□□□□□ -0.62
BEST3-209ENST00000548658 P3H1Q32P28 736 aa11.2□□□□□ -0.62
BEST3-209ENST00000548658 XKR5Q6UX68 686 aa11.2□□□□□ -0.62
BEST3-209ENST00000548658 ARHGEF18Q6ZSZ5 1173 aa11.2□□□□□ -0.62
BEST3-209ENST00000548658 ARHGAP22Q7Z5H3 698 aa11.2□□□□□ -0.62
BEST3-209ENST00000548658 FAM129CQ86XR2 697 aa11.2□□□□□ -0.62
BEST3-209ENST00000548658 TMEM139Q8IV31 216 aa11.2□□□□□ -0.62
BEST3-209ENST00000548658 CCDC110Q8TBZ0 833 aa11.2□□□□□ -0.62
BEST3-209ENST00000548658 HEXDCQ8WVB3 486 aa11.2□□□□□ -0.62
BEST3-209ENST00000548658 CXorf40BQ96DE9 158 aa11.2□□□□□ -0.62
BEST3-209ENST00000548658 C10orf88Q9H8K7 445 aa11.2□□□□□ -0.62
BEST3-209ENST00000548658 ARNT2Q9HBZ2 717 aa11.2□□□□□ -0.62
BEST3-209ENST00000548658 FBXO8Q9NRD0 319 aa11.2□□□□□ -0.62
BEST3-209ENST00000548658 FOXJ2Q9P0K8 574 aa11.2□□□□□ -0.62
BEST3-209ENST00000548658 TMPRSS11EQ9UL52 423 aa11.2□□□□□ -0.62
BEST3-209ENST00000548658 AHCTF1Q8WYP5 2266 aa11.2□□□□□ -0.62
BEST3-209ENST00000548658 PRR19A6NJB7 356 aa11.19□□□□□ -0.62
BEST3-209ENST00000548658 EFCAB7A8K855 629 aa11.19□□□□□ -0.62
BEST3-209ENST00000548658 AGRPO00253 132 aa11.19□□□□□ -0.62
BEST3-209ENST00000548658 PSMD3O43242 534 aa11.19□□□□□ -0.62
BEST3-209ENST00000548658 KRT86O43790 486 aa11.19□□□□□ -0.62
BEST3-209ENST00000548658 UGT1A9O60656 530 aa11.19□□□□□ -0.62
BEST3-209ENST00000548658 POP7O75817 140 aaKnown RBP11.19□□□□□ -0.62
BEST3-209ENST00000548658 SRP72O76094 671 aaKnown RBP11.19□□□□□ -0.62
BEST3-209ENST00000548658 UBXN7O94888 489 aa11.19□□□□□ -0.62
BEST3-209ENST00000548658 PRAMEF1O95521 474 aa11.19□□□□□ -0.62
BEST3-209ENST00000548658 ANKRD34CP0C6C1 535 aa11.19□□□□□ -0.62
BEST3-209ENST00000548658 UGT1A6P19224 532 aa11.19□□□□□ -0.62
BEST3-209ENST00000548658 UGT1A1P22309 533 aa11.19□□□□□ -0.62
BEST3-209ENST00000548658 UGT1A4P22310 534 aa11.19□□□□□ -0.62
BEST3-209ENST00000548658 RPL10P27635 214 aaKnown RBP11.19□□□□□ -0.62
BEST3-209ENST00000548658 PSMB4P28070 264 aa11.19□□□□□ -0.62
BEST3-209ENST00000548658 AKT1P31749 480 aa11.19□□□□□ -0.62
BEST3-209ENST00000548658 STIP1P31948 543 aaKnown RBP11.19□□□□□ -0.62
BEST3-209ENST00000548658 UGT1A3P35503 534 aa11.19□□□□□ -0.62
BEST3-209ENST00000548658 SLC19A1P41440 591 aa11.19□□□□□ -0.62
BEST3-209ENST00000548658 MAPK9P45984 424 aa11.19□□□□□ -0.62
BEST3-209ENST00000548658 GSDMDP57764 484 aa11.19□□□□□ -0.62
BEST3-209ENST00000548658 COL9A2Q14055 689 aaPredicted RBP11.19□□□□□ -0.62
BEST3-209ENST00000548658 TGIF1Q15583 401 aa11.19□□□□□ -0.62
BEST3-209ENST00000548658 SEPT7Q16181 437 aaKnown RBP11.19□□□□□ -0.62
BEST3-209ENST00000548658 PLA2G4EQ3MJ16 856 aa11.19□□□□□ -0.62
BEST3-209ENST00000548658 KHDC1Q4VXA5 237 aaKnown RBP11.19□□□□□ -0.62
BEST3-209ENST00000548658 SNAP47Q5SQN1 464 aa11.19□□□□□ -0.62
BEST3-209ENST00000548658 GPRC6AQ5T6X5 926 aa11.19□□□□□ -0.62
BEST3-209ENST00000548658 KLHL35Q6PF15 583 aa11.19□□□□□ -0.62
BEST3-209ENST00000548658 TMEM220Q6QAJ8 160 aa11.19□□□□□ -0.62
BEST3-209ENST00000548658 CEACAM20Q6UY09 585 aa11.19□□□□□ -0.62
BEST3-209ENST00000548658 C11orf96Q7Z7L8 435 aa11.19□□□□□ -0.62
BEST3-209ENST00000548658 ZFAND4Q86XD8 727 aa11.19□□□□□ -0.62
BEST3-209ENST00000548658 RASGEF1AQ8N9B8 481 aa11.19□□□□□ -0.62
BEST3-209ENST00000548658 SPC24Q8NBT2 197 aa11.19□□□□□ -0.62
BEST3-209ENST00000548658 OR4K2Q8NGD2 314 aa11.19□□□□□ -0.62
BEST3-209ENST00000548658 ART4Q93070 314 aa11.19□□□□□ -0.62
BEST3-209ENST00000548658 ULK4Q96C45 1275 aa11.19□□□□□ -0.62
BEST3-209ENST00000548658 SGF29Q96ES7 293 aa11.19□□□□□ -0.62
BEST3-209ENST00000548658 DCUN1D1Q96GG9 259 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms