RNA–Protein interactions for RNA: ENST00000548539.1

VPS29-205, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 598 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-205ENST00000548539 OCIAD1Q9NX40 245 aa4.05□□□□□ -1.76
VPS29-205ENST00000548539 HAO2Q9NYQ3 351 aa4.05□□□□□ -1.76
VPS29-205ENST00000548539 C1RLQ9NZP8 487 aa4.05□□□□□ -1.76
VPS29-205ENST00000548539 CRNNQ9UBG3 495 aaPredicted RBP4.05□□□□□ -1.76
VPS29-205ENST00000548539 KCNS2Q9ULS6 477 aa4.05□□□□□ -1.76
VPS29-205ENST00000548539 IGLV5-52A0A0A0MRZ9 124 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 A0A1W2PRQ8 180 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 A8MXE2 369 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 H0YIN7 160 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 PLK4O00444 970 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 SLC16A5O15375 505 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 KCNN4O15554 427 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 SPRY1O43609 319 aaPredicted RBP4.04□□□□□ -1.76
VPS29-205ENST00000548539 KDM4BO94953 1096 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 SLCO2B1O94956 709 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 GLULP15104 373 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 EEF1DP29692 281 aaKnown RBP4.04□□□□□ -1.76
VPS29-205ENST00000548539 CORO1AP31146 461 aaKnown RBP4.04□□□□□ -1.76
VPS29-205ENST00000548539 CDKN2AP42771 156 aaKnown RBP4.04□□□□□ -1.76
VPS29-205ENST00000548539 KCNJ4P48050 445 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 CCR3P51677 355 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 RAD23AP54725 363 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 KRTAP10-5P60370 271 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 COG7P83436 770 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 POU5F1Q01860 360 aaKnown RBP4.04□□□□□ -1.76
VPS29-205ENST00000548539 MVPQ14764 893 aaKnown RBP4.04□□□□□ -1.76
VPS29-205ENST00000548539 SNAPC1Q16533 368 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 SYT16Q17RD7 645 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 KRTCAP3Q53RY4 240 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 KRBOX4Q5JUW0 171 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 DHRS7BQ6IAN0 325 aaPredicted RBP4.04□□□□□ -1.76
VPS29-205ENST00000548539 BRAT1Q6PJG6 821 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 ATG9AQ7Z3C6 839 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 CAMKMTQ7Z624 323 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 KRT77Q7Z794 578 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 ADIPOR2Q86V24 386 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 VSIG1Q86XK7 387 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 CEP57Q86XR8 500 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 DCP1BQ8IZD4 617 aaKnown RBP4.04□□□□□ -1.76
VPS29-205ENST00000548539 FAM9BQ8IZU0 186 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 PELI3Q8N2H9 469 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 TC2NQ8N9U0 490 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 OR5R1Q8NH85 324 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 WDR20Q8TBZ3 569 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 MRPS27Q92552 414 aaKnown RBP4.04□□□□□ -1.76
VPS29-205ENST00000548539 LINC00615Q96LM1 132 aaPredicted RBP4.04□□□□□ -1.76
VPS29-205ENST00000548539 FAM129AQ9BZQ8 928 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 MMP27Q9H306 513 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 ST6GALNAC4Q9H4F1 302 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 SH3GLB2Q9NR46 395 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 MCM9Q9NXL9 1143 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 GDE1Q9NZC3 331 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 AMACRQ9UHK6 382 aa4.04□□□□□ -1.76
VPS29-205ENST00000548539 A0A0B4J293 547 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 A0A0U1RQJ8 604 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 CREG1O75629 220 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 CLDN14O95500 239 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 C22orf31O95567 290 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 PRSS2P07478 247 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 IGHV4-30-4P0DP06 118 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 SRCP12931 536 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 UGT1A1P22309 533 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 GABRA5P31644 462 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 FASLGP48023 281 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 PGGT1BP53609 377 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 CSE1LP55060 971 aaKnown RBP4.03□□□□□ -1.76
VPS29-205ENST00000548539 PDE1BQ01064 536 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 CRYZQ08257 329 aaKnown RBP4.03□□□□□ -1.76
VPS29-205ENST00000548539 DSC1Q08554 894 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 MYBPHQ13203 477 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 OASLQ15646 514 aaKnown RBP4.03□□□□□ -1.76
VPS29-205ENST00000548539 CCDC184Q52MB2 194 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 SETMARQ53H47 684 aaPredicted RBP4.03□□□□□ -1.76
VPS29-205ENST00000548539 TCP11X2Q5H9J9 407 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 EFHC1Q5JVL4 640 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 ZDHHC20Q5W0Z9 365 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 KRT80Q6KB66 452 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 C8orf82Q6P1X6 216 aaPredicted RBP4.03□□□□□ -1.76
VPS29-205ENST00000548539 RHBDF2Q6PJF5 856 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 RAD9BQ6WBX8 426 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 CCNI2Q6ZMN8 369 aaPredicted RBP4.03□□□□□ -1.76
VPS29-205ENST00000548539 TPRG1Q6ZUI0 275 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 MAP7D3Q8IWC1 876 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 PM20D2Q8IYS1 436 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 AFAP1Q8N556 730 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 SLC38A9Q8NBW4 561 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 CFAP61Q8NHU2 1237 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 TAS1R2Q8TE23 839 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 SLC38A5Q8WUX1 472 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 ZNF653Q96CK0 615 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 NXNL1Q96CM4 212 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 SCMH1Q96GD3 660 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 ZNF830Q96NB3 372 aaPredicted RBP4.03□□□□□ -1.76
VPS29-205ENST00000548539 DACH2Q96NX9 599 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 OR1F2PQ96R84 312 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 SEMA6AQ9H2E6 1030 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 DENND2DQ9H6A0 471 aaPredicted RBP4.03□□□□□ -1.76
VPS29-205ENST00000548539 OPA3Q9H6K4 179 aa4.03□□□□□ -1.76
VPS29-205ENST00000548539 WBP11Q9Y2W2 641 aaKnown RBP4.03□□□□□ -1.76
VPS29-205ENST00000548539 PTPRCP08575 1304 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms