RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 SGTAO43765 313 aa28.38■■■□□ 2.13
BRF1-213ENST00000548421 CCNFP41002 786 aa28.38■■■□□ 2.13
BRF1-213ENST00000548421 KIAA1024LP59773 190 aa28.38■■■□□ 2.13
BRF1-213ENST00000548421 PFN3P60673 137 aa28.38■■■□□ 2.13
BRF1-213ENST00000548421 PDAP1Q13442 181 aaKnown RBP28.38■■■□□ 2.13
BRF1-213ENST00000548421 ZNF460Q14592 562 aa28.38■■■□□ 2.13
BRF1-213ENST00000548421 TAF1BQ53T94 588 aaPredicted RBP28.38■■■□□ 2.13
BRF1-213ENST00000548421 UGT3A1Q6NUS8 523 aa28.38■■■□□ 2.13
BRF1-213ENST00000548421 DOK6Q6PKX4 331 aa28.38■■■□□ 2.13
BRF1-213ENST00000548421 PIM3Q86V86 326 aa28.38■■■□□ 2.13
BRF1-213ENST00000548421 C11orf74Q86VG3 221 aa28.38■■■□□ 2.13
BRF1-213ENST00000548421 KRT222Q8N1A0 295 aa28.38■■■□□ 2.13
BRF1-213ENST00000548421 FAM136AQ96C01 138 aa28.38■■■□□ 2.13
BRF1-213ENST00000548421 ZNF514Q96K75 400 aaPredicted RBP28.38■■■□□ 2.13
BRF1-213ENST00000548421 HSPA12BQ96MM6 686 aa28.38■■■□□ 2.13
BRF1-213ENST00000548421 GPR21Q99679 349 aa28.38■■■□□ 2.13
BRF1-213ENST00000548421 TSSK1BQ9BXA7 367 aa28.38■■■□□ 2.13
BRF1-213ENST00000548421 DUSP15Q9H1R2 295 aaPredicted RBP28.38■■■□□ 2.13
BRF1-213ENST00000548421 TLK1Q9UKI8 766 aa28.38■■■□□ 2.13
BRF1-213ENST00000548421 TMEM98Q9Y2Y6 226 aa28.38■■■□□ 2.13
BRF1-213ENST00000548421 THADAQ6YHU6 1953 aa28.38■■■□□ 2.13
BRF1-213ENST00000548421 GPR89AB7ZAQ6 455 aa28.37■■■□□ 2.13
BRF1-213ENST00000548421 C2P06681 752 aa28.37■■■□□ 2.13
BRF1-213ENST00000548421 GPR89BP0CG08 455 aa28.37■■■□□ 2.13
BRF1-213ENST00000548421 SLC35E2BP0CK96 405 aa28.37■■■□□ 2.13
BRF1-213ENST00000548421 ZNF8P17098 575 aaPredicted RBP28.37■■■□□ 2.13
BRF1-213ENST00000548421 PRLHRP49683 370 aa28.37■■■□□ 2.13
BRF1-213ENST00000548421 PGGT1BP53609 377 aa28.37■■■□□ 2.13
BRF1-213ENST00000548421 CTSCP53634 463 aa28.37■■■□□ 2.13
BRF1-213ENST00000548421 YPEL5P62699 121 aa28.37■■■□□ 2.13
BRF1-213ENST00000548421 SLC18A2Q05940 514 aa28.37■■■□□ 2.13
BRF1-213ENST00000548421 PDE1CQ14123 709 aaPredicted RBP28.37■■■□□ 2.13
BRF1-213ENST00000548421 CCDC91Q7Z6B0 441 aa28.37■■■□□ 2.13
BRF1-213ENST00000548421 ABI3BPQ7Z7G0 1075 aa28.37■■■□□ 2.13
BRF1-213ENST00000548421 ALKBH8Q96BT7 664 aaKnown RBP28.37■■■□□ 2.13
BRF1-213ENST00000548421 VPS11Q9H270 941 aa28.37■■■□□ 2.13
BRF1-213ENST00000548421 GPAMQ9HCL2 828 aa28.37■■■□□ 2.13
BRF1-213ENST00000548421 CAMSAP3Q9P1Y5 1249 aaPredicted RBP28.37■■■□□ 2.13
BRF1-213ENST00000548421 TRMT6Q9UJA5 497 aaKnown RBP28.37■■■□□ 2.13
BRF1-213ENST00000548421 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa28.36■■■□□ 2.13
BRF1-213ENST00000548421 TRIM16O95361 564 aa28.36■■■□□ 2.13
BRF1-213ENST00000548421 FTH1P02794 183 aa28.36■■■□□ 2.13
BRF1-213ENST00000548421 SKIV2L2P42285 1042 aaKnown RBP28.36■■■□□ 2.13
BRF1-213ENST00000548421 BCL7AQ4VC05 210 aa28.36■■■□□ 2.13
BRF1-213ENST00000548421 PPM1JQ5JR12 505 aa28.36■■■□□ 2.13
BRF1-213ENST00000548421 TMEM220Q6QAJ8 160 aa28.36■■■□□ 2.13
BRF1-213ENST00000548421 TMEFF1Q8IYR6 380 aa28.36■■■□□ 2.13
BRF1-213ENST00000548421 FAM174AQ8TBP5 190 aa28.36■■■□□ 2.13
BRF1-213ENST00000548421 LKAAEAR1Q8TD35 194 aa28.36■■■□□ 2.13
BRF1-213ENST00000548421 GAB3Q8WWW8 586 aa28.36■■■□□ 2.13
BRF1-213ENST00000548421 SARS2Q9NP81 518 aaKnown RBP28.36■■■□□ 2.13
BRF1-213ENST00000548421 CREB1P16220 341 aa28.35■■■□□ 2.13
BRF1-213ENST00000548421 ITGB6P18564 788 aa28.35■■■□□ 2.13
BRF1-213ENST00000548421 RABIFP47224 123 aa28.35■■■□□ 2.13
BRF1-213ENST00000548421 CLCN7P51798 805 aa28.35■■■□□ 2.13
BRF1-213ENST00000548421 NFATC4Q14934 902 aa28.35■■■□□ 2.13
BRF1-213ENST00000548421 TRAPPC5Q8IUR0 188 aa28.35■■■□□ 2.13
BRF1-213ENST00000548421 SSU72Q9NP77 194 aaKnown RBP28.35■■■□□ 2.13
BRF1-213ENST00000548421 SPATS2LQ9NUQ6 558 aaKnown RBP28.35■■■□□ 2.13
BRF1-213ENST00000548421 GALPQ9UBC7 116 aa28.35■■■□□ 2.13
BRF1-213ENST00000548421 EIF2B4Q9UI10 523 aaKnown RBP28.35■■■□□ 2.13
BRF1-213ENST00000548421 GPR34Q9UPC5 381 aa28.35■■■□□ 2.13
BRF1-213ENST00000548421 SLC17A4Q9Y2C5 497 aa28.35■■■□□ 2.13
BRF1-213ENST00000548421 ANKRD6Q9Y2G4 727 aa28.35■■■□□ 2.13
BRF1-213ENST00000548421 ACOT9Q9Y305 439 aa28.35■■■□□ 2.13
BRF1-213ENST00000548421 A0A087X1B8 175 aa28.34■■■□□ 2.13
BRF1-213ENST00000548421 CHUKO15111 745 aa28.34■■■□□ 2.13
BRF1-213ENST00000548421 NUAK1O60285 661 aa28.34■■■□□ 2.13
BRF1-213ENST00000548421 MAGEC1O60732 1142 aa28.34■■■□□ 2.13
BRF1-213ENST00000548421 WISP3O95389 354 aaPredicted RBP28.34■■■□□ 2.13
BRF1-213ENST00000548421 BRAFP15056 766 aa28.34■■■□□ 2.13
BRF1-213ENST00000548421 KELP23276 732 aa28.34■■■□□ 2.13
BRF1-213ENST00000548421 HTR1BP28222 390 aa28.34■■■□□ 2.13
BRF1-213ENST00000548421 ZNF528Q3MIS6 628 aa28.34■■■□□ 2.13
BRF1-213ENST00000548421 LPCAT2Q7L5N7 544 aa28.34■■■□□ 2.13
BRF1-213ENST00000548421 BEND7Q8N7W2 519 aaPredicted RBP28.34■■■□□ 2.13
BRF1-213ENST00000548421 SIDT2Q8NBJ9 832 aaKnown RBP28.34■■■□□ 2.13
BRF1-213ENST00000548421 CD200R1Q8TD46 325 aa28.34■■■□□ 2.13
BRF1-213ENST00000548421 SLC6A18Q96N87 628 aa28.34■■■□□ 2.13
BRF1-213ENST00000548421 LATS2Q9NRM7 1088 aa28.34■■■□□ 2.13
BRF1-213ENST00000548421 DHRS7Q9Y394 339 aa28.34■■■□□ 2.13
BRF1-213ENST00000548421 FAM86C2PA6NEL3 165 aa28.34■■■□□ 2.13
BRF1-213ENST00000548421 ZNF37AP17032 561 aaPredicted RBP28.34■■■□□ 2.13
BRF1-213ENST00000548421 Q6ZSR6 202 aa28.34■■■□□ 2.13
BRF1-213ENST00000548421 BANPQ8N9N5 519 aa28.34■■■□□ 2.13
BRF1-213ENST00000548421 GIMAP7Q8NHV1 300 aa28.34■■■□□ 2.13
BRF1-213ENST00000548421 NELL1Q92832 810 aa28.34■■■□□ 2.13
BRF1-213ENST00000548421 APOPT1Q96IL0 206 aa28.34■■■□□ 2.13
BRF1-213ENST00000548421 SLC13A1Q9BZW2 595 aa28.34■■■□□ 2.13
BRF1-213ENST00000548421 RMI1Q9H9A7 625 aa28.34■■■□□ 2.13
BRF1-213ENST00000548421 SYTL2Q9HCH5 934 aa28.34■■■□□ 2.13
BRF1-213ENST00000548421 AASDHPPTQ9NRN7 309 aa28.34■■■□□ 2.13
BRF1-213ENST00000548421 MKS1Q9NXB0 559 aa28.34■■■□□ 2.13
BRF1-213ENST00000548421 FAM53CQ9NYF3 392 aa28.34■■■□□ 2.13
BRF1-213ENST00000548421 KLHL42Q9P2K6 505 aa28.34■■■□□ 2.13
BRF1-213ENST00000548421 TMEM202A6NGA9 273 aa28.33■■■□□ 2.13
BRF1-213ENST00000548421 COPEO14579 308 aa28.33■■■□□ 2.13
BRF1-213ENST00000548421 LILRB5O75023 590 aa28.33■■■□□ 2.13
BRF1-213ENST00000548421 DNAJC6O75061 913 aa28.33■■■□□ 2.13
BRF1-213ENST00000548421 CEACAM5P06731 702 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms