RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 HERPUD2Q9BSE4 406 aa6.61□□□□□ -1.35
SCAF11-211ENST00000547950 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.61□□□□□ -1.35
SCAF11-211ENST00000547950 ASPSCR1Q9BZE9 553 aa6.61□□□□□ -1.35
SCAF11-211ENST00000547950 UGT1A7Q9HAW7 530 aa6.61□□□□□ -1.35
SCAF11-211ENST00000547950 UGT1A10Q9HAW8 530 aa6.61□□□□□ -1.35
SCAF11-211ENST00000547950 UGT1A8Q9HAW9 530 aa6.61□□□□□ -1.35
SCAF11-211ENST00000547950 SCHIP1Q9P0W5 487 aaPredicted RBP6.61□□□□□ -1.35
SCAF11-211ENST00000547950 KLHL8Q9P2G9 620 aaPredicted RBP6.61□□□□□ -1.35
SCAF11-211ENST00000547950 PDP2Q9P2J9 529 aa6.61□□□□□ -1.35
SCAF11-211ENST00000547950 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.61□□□□□ -1.35
SCAF11-211ENST00000547950 PCDHGA3Q9Y5H0 932 aa6.61□□□□□ -1.35
SCAF11-211ENST00000547950 FASNP49327 2511 aaKnown RBP6.6□□□□□ -1.35
SCAF11-211ENST00000547950 hCG_1818297A0A087WSY0 165 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 LOC285095A0A1B0GVY8 99 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 B8ZZF3 427 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.6□□□□□ -1.35
SCAF11-211ENST00000547950 H7C0C1 242 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 PYCARD-AS1I3L0S3 204 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 J3QKU1 62 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 CHUKO15111 745 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 MTSS1O43312 755 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 PSTPIP1O43586 416 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 VEGFDO43915 354 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 POP7O75817 140 aaKnown RBP6.6□□□□□ -1.35
SCAF11-211ENST00000547950 AGTP01019 485 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 VIPP01282 170 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 EPOP01588 193 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 FAM87AP0C7U9 286 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 XRCC1P18887 633 aaPredicted RBP6.6□□□□□ -1.35
SCAF11-211ENST00000547950 IDSP22304 550 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 LORP23490 312 aaPredicted RBP6.6□□□□□ -1.35
SCAF11-211ENST00000547950 ATP5OP48047 213 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 SEPHS1P49903 392 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 ATP1A2P50993 1020 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 DCDC1P59894 354 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 MC2RQ01718 297 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 TMEM115Q12893 351 aaPredicted RBP6.6□□□□□ -1.35
SCAF11-211ENST00000547950 NFATC3Q12968 1075 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 GTF2H3Q13889 308 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 PTPRCAPQ14761 206 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 CHRNA6Q15825 494 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 PPP2R5EQ16537 467 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 TBR1Q16650 682 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 ATP13A5Q4VNC0 1218 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 TFDP3Q5H9I0 405 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 PDPK2PQ6A1A2 396 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 KDELC1Q6UW63 502 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 FAM151BQ6UXP7 276 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 ARHGAP22Q7Z5H3 698 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 DAAM2Q86T65 1068 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 LRRTM4Q86VH4 590 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 PLXDC1Q8IUK5 500 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 TRAPPC5Q8IUR0 188 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 CCDC170Q8IYT3 715 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 KATNAL2Q8IYT4 538 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 CACNA2D3Q8IZS8 1091 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 ZNF567Q8N184 647 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 KRT35Q92764 455 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 CXorf40BQ96DE9 158 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 RNF31Q96EP0 1072 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 OXNAD1Q96HP4 312 aaPredicted RBP6.6□□□□□ -1.35
SCAF11-211ENST00000547950 TGM7Q96PF1 710 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 FCRL5Q96RD9 977 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 DDA1Q9BW61 102 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 B3GNT4Q9C0J1 378 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 TRABDQ9H4I3 376 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 IL26Q9NPH9 171 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 ZNF624Q9P2J8 865 aaPredicted RBP6.6□□□□□ -1.35
SCAF11-211ENST00000547950 RSPH14Q9UHP6 348 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 TRHDEQ9UKU6 1024 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 TMPRSS11EQ9UL52 423 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 PKP3Q9Y446 797 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 MAP4K5Q9Y4K4 846 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 SLC30A1Q9Y6M5 507 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 DUSP10Q9Y6W6 482 aa6.6□□□□□ -1.35
SCAF11-211ENST00000547950 TP53BP1Q12888 1972 aaPredicted RBP6.6□□□□□ -1.35
SCAF11-211ENST00000547950 LOC400499M0QZD8 3231 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 MYLKQ15746 1914 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 GLYATL1P3A0A0U1RQE8 302 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 MACROD2A1Z1Q3 448 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 FIGNL2A6NMB9 653 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 OR52A4PA6NMU1 304 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 GPR89AB7ZAQ6 455 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 POLR1CO15160 346 aaPredicted RBP6.59□□□□□ -1.35
SCAF11-211ENST00000547950 GPR39O43194 453 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 SLC28A2O43868 658 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 RAD1O60671 282 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 RASSF9O75901 435 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 UBXN7O94888 489 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 LCA5LO95447 670 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 ITGB2P05107 769 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 GPR89BP0CG08 455 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 LIFP15018 202 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 BRAFP15056 766 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 VCLP18206 1134 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 CTNNA2P26232 953 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 RBL1P28749 1068 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 PBLDP30039 288 aaPredicted RBP6.59□□□□□ -1.35
SCAF11-211ENST00000547950 CYLC1P35663 651 aaPredicted RBP6.59□□□□□ -1.35
SCAF11-211ENST00000547950 HMGCLP35914 325 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms