RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 C1QTNF2Q9BXJ5 285 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 ABCG8Q9H221 673 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 CDC42EP4Q9H3Q1 356 aaKnown RBP11.96□□□□□ -0.49
HDAC7-226ENST00000547259 FAM83DQ9H4H8 585 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 VPS37BQ9H9H4 285 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 UCKL1Q9NWZ5 548 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 NINJ2Q9NZG7 142 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 NFKBIL1Q9UBC1 381 aaPredicted RBP11.96□□□□□ -0.49
HDAC7-226ENST00000547259 APPL1Q9UKG1 709 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 SPTY2D1-AS1A0A0U1RR47 76 aa11.95□□□□□ -0.5
HDAC7-226ENST00000547259 K7ESM1 405 aa11.95□□□□□ -0.5
HDAC7-226ENST00000547259 TOR1BO14657 336 aa11.95□□□□□ -0.5
HDAC7-226ENST00000547259 CSO75390 466 aaKnown RBP11.95□□□□□ -0.5
HDAC7-226ENST00000547259 ERLIN1O75477 346 aa11.95□□□□□ -0.5
HDAC7-226ENST00000547259 PRAMEF1O95521 474 aa11.95□□□□□ -0.5
HDAC7-226ENST00000547259 PAK4O96013 591 aaPredicted RBP11.95□□□□□ -0.5
HDAC7-226ENST00000547259 PCCBP05166 539 aa11.95□□□□□ -0.5
HDAC7-226ENST00000547259 NME1P15531 152 aaKnown RBP11.95□□□□□ -0.5
HDAC7-226ENST00000547259 ARSDP51689 593 aa11.95□□□□□ -0.5
HDAC7-226ENST00000547259 PMS2P54278 862 aa11.95□□□□□ -0.5
HDAC7-226ENST00000547259 FGL2Q14314 439 aa11.95□□□□□ -0.5
HDAC7-226ENST00000547259 LRRC14Q15048 493 aa11.95□□□□□ -0.5
HDAC7-226ENST00000547259 AGERQ15109 404 aa11.95□□□□□ -0.5
HDAC7-226ENST00000547259 IRF4Q15306 451 aa11.95□□□□□ -0.5
HDAC7-226ENST00000547259 LONRF1Q17RB8 773 aa11.95□□□□□ -0.5
HDAC7-226ENST00000547259 STEAP4Q687X5 459 aa11.95□□□□□ -0.5
HDAC7-226ENST00000547259 RAET1GQ6H3X3 334 aa11.95□□□□□ -0.5
HDAC7-226ENST00000547259 EMBQ6PCB8 327 aa11.95□□□□□ -0.5
HDAC7-226ENST00000547259 GCNT7Q6ZNI0 430 aa11.95□□□□□ -0.5
HDAC7-226ENST00000547259 RELL1Q8IUW5 271 aa11.95□□□□□ -0.5
HDAC7-226ENST00000547259 ZNF843Q8N446 348 aa11.95□□□□□ -0.5
HDAC7-226ENST00000547259 TP53I13Q8NBR0 393 aaPredicted RBP11.95□□□□□ -0.5
HDAC7-226ENST00000547259 DENND6BQ8NEG7 585 aa11.95□□□□□ -0.5
HDAC7-226ENST00000547259 OR6P1Q8NGX9 317 aa11.95□□□□□ -0.5
HDAC7-226ENST00000547259 GSDMBQ8TAX9 411 aa11.95□□□□□ -0.5
HDAC7-226ENST00000547259 IFI44Q8TCB0 444 aa11.95□□□□□ -0.5
HDAC7-226ENST00000547259 AENQ8WTP8 325 aaKnown RBP11.95□□□□□ -0.5
HDAC7-226ENST00000547259 NAT6Q93015 286 aa11.95□□□□□ -0.5
HDAC7-226ENST00000547259 SCAMP4Q969E2 229 aa11.95□□□□□ -0.5
HDAC7-226ENST00000547259 HDAC10Q969S8 669 aa11.95□□□□□ -0.5
HDAC7-226ENST00000547259 CDKN2AIPNLQ96HQ2 116 aa11.95□□□□□ -0.5
HDAC7-226ENST00000547259 RIOK2Q9BVS4 552 aaKnown RBP11.95□□□□□ -0.5
HDAC7-226ENST00000547259 SPATA16Q9BXB7 569 aa11.95□□□□□ -0.5
HDAC7-226ENST00000547259 CDH19Q9H159 772 aa11.95□□□□□ -0.5
HDAC7-226ENST00000547259 FZD3Q9NPG1 666 aa11.95□□□□□ -0.5
HDAC7-226ENST00000547259 C20orf96Q9NUD7 363 aaPredicted RBP11.95□□□□□ -0.5
HDAC7-226ENST00000547259 CA5BQ9Y2D0 317 aa11.95□□□□□ -0.5
HDAC7-226ENST00000547259 PCDHGA8Q9Y5G5 932 aa11.95□□□□□ -0.5
HDAC7-226ENST00000547259 SLC30A1Q9Y6M5 507 aa11.95□□□□□ -0.5
HDAC7-226ENST00000547259 FAM169AQ9Y6X4 670 aa11.95□□□□□ -0.5
HDAC7-226ENST00000547259 AHCTF1Q8WYP5 2266 aa11.95□□□□□ -0.5
HDAC7-226ENST00000547259 ZCWPW2A0A1B0GU75 182 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 CCDC162PA2VCL2 907 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 OR51F1A6NGY5 319 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 H7C0S8 307 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 AQP9O43315 295 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 SPAG6O75602 509 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 C1QL1O75973 258 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 VAPBO95292 243 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 GOT2P00505 430 aaKnown RBP11.94□□□□□ -0.5
HDAC7-226ENST00000547259 PRB1P04280 392 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 MPOP05164 745 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 GSTA2P09210 222 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 GIMD1P0DJR0 217 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 PLA2G2AP14555 144 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 ITGALP20701 1170 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 PSMA3P25788 255 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 SSTR1P30872 391 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 PHBP35232 272 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 IGFALSP35858 605 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 GPR1P46091 355 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 VAC14Q08AM6 782 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 PEX6Q13608 980 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 THOC5Q13769 683 aaKnown RBP11.94□□□□□ -0.5
HDAC7-226ENST00000547259 ITGA9Q13797 1035 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 KYNUQ16719 465 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 ISXQ2M1V0 245 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 ZRANB3Q5FWF4 1079 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 HENMT1Q5T8I9 393 aaKnown RBP11.94□□□□□ -0.5
HDAC7-226ENST00000547259 PDPK2PQ6A1A2 396 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 RBM44Q6ZP01 1051 aaKnown RBP11.94□□□□□ -0.5
HDAC7-226ENST00000547259 TRMT10CQ7L0Y3 403 aaKnown RBP11.94□□□□□ -0.5
HDAC7-226ENST00000547259 KCNMB4Q86W47 210 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 ARL14Q8N4G2 192 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 TRAM1L1Q8N609 369 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 SNRNP27Q8WVK2 155 aaKnown RBP11.94□□□□□ -0.5
HDAC7-226ENST00000547259 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.94□□□□□ -0.5
HDAC7-226ENST00000547259 CERS2Q96G23 380 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 BMFQ96LC9 184 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 ZSCAN5AQ9BUG6 496 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 SUDS3Q9H7L9 328 aaPredicted RBP11.94□□□□□ -0.5
HDAC7-226ENST00000547259 IL26Q9NPH9 171 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 PPANQ9NQ55 473 aaKnown RBP11.94□□□□□ -0.5
HDAC7-226ENST00000547259 GPR27Q9NS67 375 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 CATSPERZQ9NTU4 200 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 IL1RAPL1Q9NZN1 696 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 SPASTQ9UBP0 616 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 CRLS1Q9UJA2 301 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 PCDHB1Q9Y5F3 818 aa11.94□□□□□ -0.5
HDAC7-226ENST00000547259 UNC13CQ8NB66 2214 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms