RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 CD3EAPO15446 510 aaKnown RBP14.25□□□□□ -0.13
DDX54-203ENST00000546869 SGTAO43765 313 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 NUDT21O43809 227 aaKnown RBP14.25□□□□□ -0.13
DDX54-203ENST00000546869 RFPL3O75679 317 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 POP7O75817 140 aaKnown RBP14.25□□□□□ -0.13
DDX54-203ENST00000546869 USP1O94782 785 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 TTC4O95801 387 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 POLBP06746 335 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 ACP5P13686 325 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 SLC2A4P14672 509 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 ARNTP27540 789 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 AKT1P31749 480 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 TTPAP49638 278 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 PRLHRP49683 370 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 CAV1Q03135 178 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 DNAJC3Q13217 504 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 HLTFQ14527 1009 aaKnown RBP eCLIP14.25□□□□□ -0.13
DDX54-203ENST00000546869 C14orf28Q4W4Y0 310 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 GLE1Q53GS7 698 aaKnown RBP14.25□□□□□ -0.13
DDX54-203ENST00000546869 FNBP1LQ5T0N5 605 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 N4BP2L1Q5TBK1 243 aaPredicted RBP14.25□□□□□ -0.13
DDX54-203ENST00000546869 AGAP9Q5VTM2 703 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 CASC4Q6P4E1 433 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 IYDQ6PHW0 289 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 SLC30A9Q6PML9 568 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 AMZ2Q86W34 360 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 TRAPPC5Q8IUR0 188 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 LMNTD2Q8IXW0 634 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 NAGSQ8N159 534 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 CACTIN-AS1Q8N1I8 211 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 AGGF1Q8N302 714 aaeCLIP14.25□□□□□ -0.13
DDX54-203ENST00000546869 ZDHHC1Q8WTX9 485 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 SEC14L1Q92503 715 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 SGF29Q96ES7 293 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 TCF12Q99081 682 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 EBNA1BP2Q99848 306 aaKnown RBP14.25□□□□□ -0.13
DDX54-203ENST00000546869 KLC4Q9NSK0 619 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 CATSPERZQ9NTU4 200 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 SNX24Q9Y343 169 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 FAM169AQ9Y6X4 670 aa14.25□□□□□ -0.13
DDX54-203ENST00000546869 KIR2DS5A0A0G2JLQ3 304 aa14.24□□□□□ -0.13
DDX54-203ENST00000546869 A0A0G2JNG1 304 aa14.24□□□□□ -0.13
DDX54-203ENST00000546869 CTAGE15A4D2H0 777 aa14.24□□□□□ -0.13
DDX54-203ENST00000546869 MGAT4DA6NG13 374 aa14.24□□□□□ -0.13
DDX54-203ENST00000546869 OR2AG2A6NM03 316 aa14.24□□□□□ -0.13
DDX54-203ENST00000546869 E7ESA3 106 aa14.24□□□□□ -0.13
DDX54-203ENST00000546869 F8W8V4 182 aa14.24□□□□□ -0.13
DDX54-203ENST00000546869 KIR2DS3K7RE56 304 aa14.24□□□□□ -0.13
DDX54-203ENST00000546869 VAPBO95292 243 aa14.24□□□□□ -0.13
DDX54-203ENST00000546869 CTAGE8P0CG41 777 aa14.24□□□□□ -0.13
DDX54-203ENST00000546869 PRSS56P0CW18 603 aa14.24□□□□□ -0.13
DDX54-203ENST00000546869 F3P13726 295 aa14.24□□□□□ -0.13
DDX54-203ENST00000546869 GLB1P16278 677 aa14.24□□□□□ -0.13
DDX54-203ENST00000546869 PGAM1P18669 254 aa14.24□□□□□ -0.13
DDX54-203ENST00000546869 IDSP22304 550 aa14.24□□□□□ -0.13
DDX54-203ENST00000546869 ARL4CP56559 192 aa14.24□□□□□ -0.13
DDX54-203ENST00000546869 DHX9Q08211 1270 aaKnown RBP14.24□□□□□ -0.13
DDX54-203ENST00000546869 CALCOCO2Q13137 446 aa14.24□□□□□ -0.13
DDX54-203ENST00000546869 KIR2DS5Q14953 304 aa14.24□□□□□ -0.13
DDX54-203ENST00000546869 NR1D2Q14995 579 aa14.24□□□□□ -0.13
DDX54-203ENST00000546869 INSCQ1MX18 579 aa14.24□□□□□ -0.13
DDX54-203ENST00000546869 MRNIPQ6NTE8 343 aa14.24□□□□□ -0.13
DDX54-203ENST00000546869 CRTC3Q6UUV7 619 aa14.24□□□□□ -0.13
DDX54-203ENST00000546869 ABRAXAS1Q6UWZ7 409 aa14.24□□□□□ -0.13
DDX54-203ENST00000546869 CTAGE6Q86UF2 777 aa14.24□□□□□ -0.13
DDX54-203ENST00000546869 CTAGE4Q8IX94 777 aa14.24□□□□□ -0.13
DDX54-203ENST00000546869 SFRP1Q8N474 314 aa14.24□□□□□ -0.13
DDX54-203ENST00000546869 CEP112Q8N8E3 955 aa14.24□□□□□ -0.13
DDX54-203ENST00000546869 AVL9Q8NBF6 648 aa14.24□□□□□ -0.13
DDX54-203ENST00000546869 OR2L2Q8NH16 312 aa14.24□□□□□ -0.13
DDX54-203ENST00000546869 STAMBPL1Q96FJ0 436 aa14.24□□□□□ -0.13
DDX54-203ENST00000546869 FCRL3Q96P31 734 aaPredicted RBP14.24□□□□□ -0.13
DDX54-203ENST00000546869 TRIM31Q9BZY9 425 aa14.24□□□□□ -0.13
DDX54-203ENST00000546869 GULP1Q9UBP9 304 aa14.24□□□□□ -0.13
DDX54-203ENST00000546869 TBC1D29Q9UFV1 150 aa14.24□□□□□ -0.13
DDX54-203ENST00000546869 RPS6KL1Q9Y6S9 549 aa14.24□□□□□ -0.13
DDX54-203ENST00000546869 CNOT1A5YKK6 2376 aaKnown RBP14.24□□□□□ -0.13
DDX54-203ENST00000546869 TDRD6O60522 2096 aaKnown RBP14.23□□□□□ -0.13
DDX54-203ENST00000546869 FAM221BA6H8Z2 402 aa14.23□□□□□ -0.13
DDX54-203ENST00000546869 BHMG1C9JSJ3 638 aaPredicted RBP14.23□□□□□ -0.13
DDX54-203ENST00000546869 PFDN6O15212 129 aa14.23□□□□□ -0.13
DDX54-203ENST00000546869 ZNF500O60304 480 aaPredicted RBP14.23□□□□□ -0.13
DDX54-203ENST00000546869 ADRB1P08588 477 aa14.23□□□□□ -0.13
DDX54-203ENST00000546869 XRCC1P18887 633 aaPredicted RBP14.23□□□□□ -0.13
DDX54-203ENST00000546869 OGNP20774 298 aaKnown RBP14.23□□□□□ -0.13
DDX54-203ENST00000546869 FASLGP48023 281 aa14.23□□□□□ -0.13
DDX54-203ENST00000546869 ADARP55265 1226 aaKnown RBP14.23□□□□□ -0.13
DDX54-203ENST00000546869 FRG1Q14331 258 aaKnown RBP14.23□□□□□ -0.13
DDX54-203ENST00000546869 HIF1AQ16665 826 aa14.23□□□□□ -0.13
DDX54-203ENST00000546869 ZNF658BQ4V348 819 aaPredicted RBP14.23□□□□□ -0.13
DDX54-203ENST00000546869 MSS51Q4VC12 460 aa14.23□□□□□ -0.13
DDX54-203ENST00000546869 METRNLQ641Q3 311 aa14.23□□□□□ -0.13
DDX54-203ENST00000546869 C8orf74Q6P047 294 aa14.23□□□□□ -0.13
DDX54-203ENST00000546869 CES3Q6UWW8 571 aa14.23□□□□□ -0.13
DDX54-203ENST00000546869 ZNF438Q7Z4V0 828 aa14.23□□□□□ -0.13
DDX54-203ENST00000546869 RAB44Q7Z6P3 723 aaPredicted RBP14.23□□□□□ -0.13
DDX54-203ENST00000546869 SDCCAG8Q86SQ7 713 aaPredicted RBP14.23□□□□□ -0.13
DDX54-203ENST00000546869 LRRC6Q86X45 466 aa14.23□□□□□ -0.13
DDX54-203ENST00000546869 ARL14Q8N4G2 192 aa14.23□□□□□ -0.13
DDX54-203ENST00000546869 BEND7Q8N7W2 519 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms