RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 SPG11Q96JI7 2443 aa9.1□□□□□ -0.95
SSH1-205ENST00000546812 A0A0U1RQS6 177 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 EIF3CLB5ME19 914 aaKnown RBP9.09□□□□□ -0.95
SSH1-205ENST00000546812 CCP110O43303 1012 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 ZG16O60844 167 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 LCA5LO95447 670 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 VIPP01282 170 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 PTMAP06454 111 aaKnown RBP9.09□□□□□ -0.95
SSH1-205ENST00000546812 H2AFZP0C0S5 128 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 FOLR1P15328 257 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 GPD1P21695 349 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 CAPZBP47756 277 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 CLCNKAP51800 687 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 RRADP55042 308 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 TPI1P60174 286 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 RPL7AP62424 266 aaKnown RBP9.09□□□□□ -0.95
SSH1-205ENST00000546812 OGDHQ02218 1023 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 PTSQ03393 145 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 IL10RBQ08334 325 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 SLC10A7Q0GE19 358 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 TRAF2Q12933 501 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 MAMLD1Q13495 774 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 TMCO4Q5TGY1 634 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 VWA5B1Q5TIE3 1220 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 LRRC66Q68CR7 880 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 PLEKHA7Q6IQ23 1121 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 DCUN1D2Q6PH85 259 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 ARHGAP36Q6ZRI8 547 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 FAM92BQ6ZTR7 304 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 USP45Q70EL2 814 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 H2AFVQ71UI9 128 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 PHYKPLQ8IUZ5 450 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 ARHGAP12Q8IWW6 846 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 CCDC170Q8IYT3 715 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 UBE2Q2Q8WVN8 375 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 CTNNBL1Q8WYA6 563 aaPredicted RBP9.09□□□□□ -0.95
SSH1-205ENST00000546812 MR1Q95460 341 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 SLC41A2Q96JW4 573 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 EIF3CQ99613 913 aaKnown RBP9.09□□□□□ -0.95
SSH1-205ENST00000546812 DESI2Q9BSY9 194 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 RIOK2Q9BVS4 552 aaKnown RBP9.09□□□□□ -0.95
SSH1-205ENST00000546812 NUP85Q9BW27 656 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 TRIM7Q9C029 511 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 ILKAPQ9H0C8 392 aaPredicted RBP9.09□□□□□ -0.95
SSH1-205ENST00000546812 NOD2Q9HC29 1040 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 WASH6PQ9NQA3 447 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 PARVAQ9NVD7 372 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 SCHIP1Q9P0W5 487 aaPredicted RBP9.09□□□□□ -0.95
SSH1-205ENST00000546812 SEMA5BQ9P283 1151 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 ITGB1BP2Q9UKP3 347 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 CNOT6Q9ULM6 557 aaKnown RBP9.09□□□□□ -0.95
SSH1-205ENST00000546812 TFR2Q9UP52 801 aa9.09□□□□□ -0.95
SSH1-205ENST00000546812 REXO2Q9Y3B8 237 aaKnown RBP9.09□□□□□ -0.95
SSH1-205ENST00000546812 ANKRD62A6NC57 917 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 SIGLEC16A6NMB1 481 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 F5H423 210 aaPredicted RBP9.08□□□□□ -0.96
SSH1-205ENST00000546812 DFFAO00273 331 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 CPNE3O75131 537 aaKnown RBP9.08□□□□□ -0.96
SSH1-205ENST00000546812 PGLSO95336 258 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 IPO7O95373 1038 aaKnown RBP9.08□□□□□ -0.96
SSH1-205ENST00000546812 CYP1A2P05177 515 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 RAB40ALP0C0E4 278 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 TMEM253P0C7T8 217 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 CTPS1P17812 591 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 PTGER4P35408 488 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 HSPA9P38646 679 aaKnown RBP9.08□□□□□ -0.96
SSH1-205ENST00000546812 SLC19A1P41440 591 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 MAGEA1P43355 309 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 VAV2P52735 878 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 ZNF143P52747 638 aaPredicted RBP9.08□□□□□ -0.96
SSH1-205ENST00000546812 CCZ1BP86790 482 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 CCZ1P86791 482 aaPredicted RBP9.08□□□□□ -0.96
SSH1-205ENST00000546812 ACY1Q03154 408 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 RAPSNQ13702 412 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 KCNAB1Q14722 419 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 LBRQ14739 615 aaKnown RBP9.08□□□□□ -0.96
SSH1-205ENST00000546812 SPA17Q15506 151 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 LYPLAL1Q5VWZ2 237 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 IRGCQ6NXR0 463 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 IGFL3Q6UXB1 125 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 GDF7Q7Z4P5 450 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 LRRC8AQ8IWT6 810 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 TRIM48Q8IWZ4 208 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 SIDT2Q8NBJ9 832 aaKnown RBP9.08□□□□□ -0.96
SSH1-205ENST00000546812 PIH1D2Q8WWB5 315 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 UBXN4Q92575 508 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 RSC1A1Q92681 617 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 ZNF599Q96NL3 588 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 NUDCD1Q96RS6 583 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 RAB33BQ9H082 229 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 CHST8Q9H2A9 424 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 AGPAT4Q9NRZ5 378 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 FGF21Q9NSA1 209 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 ZNF624Q9P2J8 865 aaPredicted RBP9.08□□□□□ -0.96
SSH1-205ENST00000546812 ANAPC7Q9UJX3 599 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 SNX7Q9UNH6 387 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 OSGIN2Q9Y236 505 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 NTNG1Q9Y2I2 539 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 PCDHA13Q9Y5I0 950 aa9.08□□□□□ -0.96
SSH1-205ENST00000546812 EPN1Q9Y6I3 576 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms