RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 CLDN19Q8N6F1 224 aa14.52□□□□□ -0.08
HOXC11-202ENST00000546378 ATAD1Q8NBU5 361 aa14.52□□□□□ -0.08
HOXC11-202ENST00000546378 LPCAT1Q8NF37 534 aa14.52□□□□□ -0.08
HOXC11-202ENST00000546378 NDNFQ8TB73 568 aa14.52□□□□□ -0.08
HOXC11-202ENST00000546378 DMRTB1Q96MA1 342 aa14.52□□□□□ -0.08
HOXC11-202ENST00000546378 EIF2B3Q9NR50 452 aaKnown RBP14.52□□□□□ -0.08
HOXC11-202ENST00000546378 LATS2Q9NRM7 1088 aa14.52□□□□□ -0.08
HOXC11-202ENST00000546378 TRIM24O15164 1050 aa14.52□□□□□ -0.09
HOXC11-202ENST00000546378 G6PDP11413 515 aa14.52□□□□□ -0.09
HOXC11-202ENST00000546378 IDUAP35475 653 aa14.52□□□□□ -0.09
HOXC11-202ENST00000546378 NUDT6P53370 316 aa14.52□□□□□ -0.09
HOXC11-202ENST00000546378 SEMA3AQ14563 771 aa14.52□□□□□ -0.09
HOXC11-202ENST00000546378 TRIP4Q15650 581 aaPredicted RBP14.52□□□□□ -0.09
HOXC11-202ENST00000546378 ADRM1Q16186 407 aa14.52□□□□□ -0.09
HOXC11-202ENST00000546378 C10orf120Q5SQS8 335 aa14.52□□□□□ -0.09
HOXC11-202ENST00000546378 PPP4R4Q6NUP7 873 aa14.52□□□□□ -0.09
HOXC11-202ENST00000546378 GATAD2AQ86YP4 633 aa14.52□□□□□ -0.09
HOXC11-202ENST00000546378 TTC9BQ8N6N2 239 aa14.52□□□□□ -0.09
HOXC11-202ENST00000546378 ACDQ96AP0 544 aa14.52□□□□□ -0.09
HOXC11-202ENST00000546378 SEPT5Q99719 369 aaPredicted RBP14.52□□□□□ -0.09
HOXC11-202ENST00000546378 ANKRD60Q9BZ19 345 aa14.52□□□□□ -0.09
HOXC11-202ENST00000546378 SMPD4Q9NXE4 827 aa14.52□□□□□ -0.09
HOXC11-202ENST00000546378 CBX4O00257 560 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 TBC1D4O60343 1298 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 SLC22A3O75751 556 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 GTF2E2P29084 291 aaKnown RBP14.51□□□□□ -0.09
HOXC11-202ENST00000546378 CD52P31358 61 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 CLK1P49759 484 aaKnown RBP14.51□□□□□ -0.09
HOXC11-202ENST00000546378 TXNL4AP83876 142 aaKnown RBP14.51□□□□□ -0.09
HOXC11-202ENST00000546378 INAQ16352 499 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 SOWAHCQ53LP3 525 aaPredicted RBP14.51□□□□□ -0.09
HOXC11-202ENST00000546378 TMTC4Q5T4D3 741 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 TNIP2Q8NFZ5 429 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 KIFC1Q9BW19 673 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 SLC2A11Q9BYW1 496 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 ADGRE2Q9UHX3 823 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 IKZF3Q9UKT9 509 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 ATP11BQ9Y2G3 1177 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 PCDHGA8Q9Y5G5 932 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 NINQ8N4C6 2090 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 PLXNB2O15031 1838 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 CD3EAPO15446 510 aaKnown RBP14.51□□□□□ -0.09
HOXC11-202ENST00000546378 ARCN1P48444 511 aaKnown RBP14.51□□□□□ -0.09
HOXC11-202ENST00000546378 PLA2G16P53816 162 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 ZXDBP98169 803 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 NAB1Q13506 487 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 CPSF6Q16630 551 aaKnown RBP eCLIP14.51□□□□□ -0.09
HOXC11-202ENST00000546378 LRRC73Q5JTD7 316 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 KCTD11Q693B1 232 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 DENND5AQ6IQ26 1287 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 MBOAT1Q6ZNC8 495 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 LRRTM3Q86VH5 581 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 SPATA2LQ8IUW3 424 aaPredicted RBP14.51□□□□□ -0.09
HOXC11-202ENST00000546378 KRTCAP2Q8N6L1 136 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.51□□□□□ -0.09
HOXC11-202ENST00000546378 ZNF555Q8NEP9 628 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 TPD52L3Q96J77 140 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 FEM1CQ96JP0 617 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 TSSK3Q96PN8 268 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 FUNDC2Q9BWH2 189 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 PRRG3Q9BZD7 231 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 NMUR1Q9HB89 426 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 FARSBQ9NSD9 589 aaKnown RBP14.51□□□□□ -0.09
HOXC11-202ENST00000546378 TMEM181Q9P2C4 612 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 KLQ9UEF7 1012 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 WDR81Q562E7 1941 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 TRIP12Q14669 1992 aaPredicted RBP14.51□□□□□ -0.09
HOXC11-202ENST00000546378 NDUFB5O43674 189 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 PRKD3O94806 890 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 MFN2O95140 757 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 CYBBP04839 570 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 THP07101 528 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 CAPN1P07384 714 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 ALOX12P18054 663 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 GPX3P22352 226 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 ATN1P54259 1190 aaPredicted RBP14.51□□□□□ -0.09
HOXC11-202ENST00000546378 CCL23P55773 120 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 SF1Q15637 639 aaKnown RBP14.51□□□□□ -0.09
HOXC11-202ENST00000546378 CYBRD1Q53TN4 286 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 SIRPB2Q5JXA9 342 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 CYHR1Q6ZMK1 362 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 Q6ZPB1 254 aaPredicted RBP14.51□□□□□ -0.09
HOXC11-202ENST00000546378 PLD3Q8IV08 490 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 CCDC103Q8IW40 242 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 C8orf59Q8N0T1 100 aaPredicted RBP14.51□□□□□ -0.09
HOXC11-202ENST00000546378 SFRP1Q8N474 314 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 TRPV3Q8NET8 790 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 OR7D4Q8NG98 312 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 OR7A2PQ8NGA2 310 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 OR52J3Q8NH60 311 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 GIPC2Q8TF65 315 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 HNRNPABQ99729 332 aaKnown RBP14.51□□□□□ -0.09
HOXC11-202ENST00000546378 PRDM16Q9HAZ2 1276 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 MRPL40Q9NQ50 206 aaKnown RBP14.51□□□□□ -0.09
HOXC11-202ENST00000546378 CCM2LQ9NUG4 571 aaPredicted RBP14.51□□□□□ -0.09
HOXC11-202ENST00000546378 SRRDQ9UH36 339 aa14.51□□□□□ -0.09
HOXC11-202ENST00000546378 KRBA1A5PL33 1030 aa14.5□□□□□ -0.09
HOXC11-202ENST00000546378 NT5C1B-RDH14C9J2C7 533 aa14.5□□□□□ -0.09
HOXC11-202ENST00000546378 E9PAM4 449 aa14.5□□□□□ -0.09
HOXC11-202ENST00000546378 G3V2T6 193 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms