RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 VASH2Q86V25 355 aa9.21□□□□□ -0.94
YBX3-218ENST00000546298 AMZ2Q86W34 360 aa9.21□□□□□ -0.94
YBX3-218ENST00000546298 CACNA2D3Q8IZS8 1091 aa9.21□□□□□ -0.94
YBX3-218ENST00000546298 BMPERQ8N8U9 685 aa9.21□□□□□ -0.94
YBX3-218ENST00000546298 TTC13Q8NBP0 860 aa9.21□□□□□ -0.94
YBX3-218ENST00000546298 DDHD1Q8NEL9 900 aa9.21□□□□□ -0.94
YBX3-218ENST00000546298 TBC1D10AQ9BXI6 508 aa9.21□□□□□ -0.94
YBX3-218ENST00000546298 OSBPL8Q9BZF1 889 aa9.21□□□□□ -0.94
YBX3-218ENST00000546298 GBA3Q9H227 469 aa9.21□□□□□ -0.94
YBX3-218ENST00000546298 SMOXQ9NWM0 555 aa9.21□□□□□ -0.94
YBX3-218ENST00000546298 SCHIP1Q9P0W5 487 aaPredicted RBP9.21□□□□□ -0.94
YBX3-218ENST00000546298 ZNF624Q9P2J8 865 aaPredicted RBP9.21□□□□□ -0.94
YBX3-218ENST00000546298 SLC23A2Q9UGH3 650 aa9.21□□□□□ -0.94
YBX3-218ENST00000546298 KLHL3Q9UH77 587 aa9.21□□□□□ -0.94
YBX3-218ENST00000546298 FEZ2Q9UHY8 353 aaPredicted RBP9.21□□□□□ -0.94
YBX3-218ENST00000546298 TMPRSS11EQ9UL52 423 aa9.21□□□□□ -0.94
YBX3-218ENST00000546298 UNC13CQ8NB66 2214 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 PRR19A6NJB7 356 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 B8ZZF3 427 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 F5H423 210 aaPredicted RBP9.2□□□□□ -0.94
YBX3-218ENST00000546298 POLR1CO15160 346 aaPredicted RBP9.2□□□□□ -0.94
YBX3-218ENST00000546298 PJA2O43164 708 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 UGT1A9O60656 530 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 CRTAMO95727 393 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 AGTP01019 485 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 C9P02748 559 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 PYGMP11217 842 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 UGT1A6P19224 532 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 MSH3P20585 1137 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 UGT1A1P22309 533 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 UGT1A4P22310 534 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 RPL10P27635 214 aaKnown RBP9.2□□□□□ -0.94
YBX3-218ENST00000546298 VAV2P52735 878 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 DRG2P55039 364 aaKnown RBP9.2□□□□□ -0.94
YBX3-218ENST00000546298 PDE1BQ01064 536 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 OTUD4Q01804 1114 aaKnown RBP9.2□□□□□ -0.94
YBX3-218ENST00000546298 TAF1AQ15573 450 aaPredicted RBP9.2□□□□□ -0.94
YBX3-218ENST00000546298 SEPT7Q16181 437 aaKnown RBP9.2□□□□□ -0.94
YBX3-218ENST00000546298 KHDC1Q4VXA5 237 aaKnown RBP9.2□□□□□ -0.94
YBX3-218ENST00000546298 ANKRD20A2Q5SQ80 823 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 GPRC6AQ5T6X5 926 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 ANKRD20A1Q5TYW2 823 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 ANKRD20A3Q5VUR7 823 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 CYB5D1Q6P9G0 228 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 TMEM220Q6QAJ8 160 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 FAM151BQ6UXP7 276 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 RANBP10Q6VN20 620 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 C11orf96Q7Z7L8 435 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 KIAA1328Q86T90 577 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 ZNF547Q8IVP9 402 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 SYCE1Q8N0S2 351 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 NLGN4XQ8N0W4 816 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 UBL4BQ8N7F7 174 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 BEND7Q8N7W2 519 aaPredicted RBP9.2□□□□□ -0.94
YBX3-218ENST00000546298 NLGN4YQ8NFZ3 816 aaPredicted RBP9.2□□□□□ -0.94
YBX3-218ENST00000546298 ZNF398Q8TD17 642 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 HEXDCQ8WVB3 486 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 JPH3Q8WXH2 748 aaPredicted RBP9.2□□□□□ -0.94
YBX3-218ENST00000546298 RTP4Q96DX8 246 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 ZDHHC12Q96GR4 267 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 C9orf72Q96LT7 481 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 SPATA13Q96N96 652 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 FICDQ9BVA6 458 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 UGT1A7Q9HAW7 530 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 UGT1A10Q9HAW8 530 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 UGT1A8Q9HAW9 530 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 SLC40A1Q9NP59 571 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 AMFRQ9UKV5 643 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 TFR2Q9UP52 801 aa9.2□□□□□ -0.94
YBX3-218ENST00000546298 MN1Q10571 1320 aaPredicted RBP9.2□□□□□ -0.94
YBX3-218ENST00000546298 MGAT4DA6NG13 374 aa9.19□□□□□ -0.94
YBX3-218ENST00000546298 ZNF891A8MT65 544 aaPredicted RBP9.19□□□□□ -0.94
YBX3-218ENST00000546298 MIF4GDA9UHW6 222 aaKnown RBP9.19□□□□□ -0.94
YBX3-218ENST00000546298 CFAP99D6REC4 459 aa9.19□□□□□ -0.94
YBX3-218ENST00000546298 KCNN4O15554 427 aa9.19□□□□□ -0.94
YBX3-218ENST00000546298 BUD23O43709 281 aaKnown RBP9.19□□□□□ -0.94
YBX3-218ENST00000546298 RALBP11234 206 aa9.19□□□□□ -0.94
YBX3-218ENST00000546298 PLA2G2AP14555 144 aa9.19□□□□□ -0.94
YBX3-218ENST00000546298 BRAFP15056 766 aa9.19□□□□□ -0.94
YBX3-218ENST00000546298 TYRP1P17643 537 aa9.19□□□□□ -0.94
YBX3-218ENST00000546298 AKT1P31749 480 aa9.19□□□□□ -0.94
YBX3-218ENST00000546298 MC1RQ01726 317 aa9.19□□□□□ -0.94
YBX3-218ENST00000546298 FOXM1Q08050 763 aa9.19□□□□□ -0.94
YBX3-218ENST00000546298 DMPKQ09013 629 aa9.19□□□□□ -0.94
YBX3-218ENST00000546298 KIF5AQ12840 1032 aa9.19□□□□□ -0.94
YBX3-218ENST00000546298 SRSF6Q13247 344 aaKnown RBP9.19□□□□□ -0.94
YBX3-218ENST00000546298 LINC00303Q3SY05 128 aa9.19□□□□□ -0.94
YBX3-218ENST00000546298 PEX26Q7Z412 305 aa9.19□□□□□ -0.94
YBX3-218ENST00000546298 ESX1Q8N693 406 aa9.19□□□□□ -0.94
YBX3-218ENST00000546298 RASGEF1AQ8N9B8 481 aa9.19□□□□□ -0.94
YBX3-218ENST00000546298 UBE2Q2Q8WVN8 375 aa9.19□□□□□ -0.94
YBX3-218ENST00000546298 ZFPM2Q8WW38 1151 aa9.19□□□□□ -0.94
YBX3-218ENST00000546298 EXTL1Q92935 676 aa9.19□□□□□ -0.94
YBX3-218ENST00000546298 PMEPA1Q969W9 287 aa9.19□□□□□ -0.94
YBX3-218ENST00000546298 ULK4Q96C45 1275 aa9.19□□□□□ -0.94
YBX3-218ENST00000546298 DCUN1D1Q96GG9 259 aa9.19□□□□□ -0.94
YBX3-218ENST00000546298 CTRCQ99895 268 aa9.19□□□□□ -0.94
YBX3-218ENST00000546298 BAG1Q99933 345 aaPredicted RBP9.19□□□□□ -0.94
YBX3-218ENST00000546298 C19orf43Q9BQ61 176 aa9.19□□□□□ -0.94
YBX3-218ENST00000546298 RBSNQ9H1K0 784 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms