RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 JCHAINP01591 159 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 IVLP07476 585 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 GOLGA6DP0CG33 693 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 CD86P42081 329 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 GPR1P46091 355 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 DYNLT1P63172 113 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 ISXQ2M1V0 245 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 TFDP3Q5H9I0 405 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 CRTC1Q6UUV9 634 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 MFSD7Q6UXD7 560 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 SPOCD1Q6ZMY3 1216 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 TAF8Q7Z7C8 310 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 NT5DC3Q86UY8 548 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 TMTC1Q8IUR5 882 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 NRSN1Q8IZ57 195 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.63□□□□□ -1.192e-11■■■■■ 59.4
SNHG1-223ENST00000545440 CNTD1Q8N815 330 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 LPCAT1Q8NF37 534 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 GPR156Q8NFN8 814 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 EXD1Q8NHP7 514 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 IMP4Q96G21 291 aaKnown RBP7.63□□□□□ -1.19
SNHG1-223ENST00000545440 RBM41Q96IZ5 413 aaKnown RBP7.63□□□□□ -1.19
SNHG1-223ENST00000545440 CCDC3Q9BQI4 270 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 GSDMCQ9BYG8 508 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 TMEM168Q9H0V1 697 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 CDH19Q9H159 772 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 ABCG8Q9H221 673 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 GOLPH3Q9H4A6 298 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 CARS2Q9HA77 564 aaKnown RBP7.63□□□□□ -1.19
SNHG1-223ENST00000545440 TRNAU1APQ9NX07 287 aaKnown RBP7.63□□□□□ -1.19
SNHG1-223ENST00000545440 GOLGA6AQ9NYA3 693 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 NFKBIL1Q9UBC1 381 aaPredicted RBP7.63□□□□□ -1.19
SNHG1-223ENST00000545440 PADI4Q9UM07 663 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 GPR34Q9UPC5 381 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 TMA7Q9Y2S6 64 aaKnown RBP7.63□□□□□ -1.19
SNHG1-223ENST00000545440 HYOU1Q9Y4L1 999 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 PCDHB1Q9Y5F3 818 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 ALG6Q9Y672 507 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 CACNA1GO43497 2377 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 DSPP15924 2871 aaKnown RBP7.63□□□□□ -1.19
SNHG1-223ENST00000545440 SDK2Q58EX2 2172 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 hCG_1818297A0A087WSY0 165 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 RGSL1A5PLK6 1076 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 BTNL10A8MVZ5 291 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 D6RAR5 112 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 NTN3O00634 580 aaPredicted RBP7.62□□□□□ -1.19
SNHG1-223ENST00000545440 NOBOXO60393 691 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 CST8O60676 142 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 USP12O75317 370 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 ZRANB2O95218 330 aaKnown RBP eCLIP7.62□□□□□ -1.192e-9■■■■■ 30
SNHG1-223ENST00000545440 CEACAM5P06731 702 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 TNNT1P13805 278 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 PNLIPP16233 465 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 PECAM1P16284 738 aaPredicted RBP7.62□□□□□ -1.19
SNHG1-223ENST00000545440 PTPN3P26045 913 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 CTNNA1P35221 906 aaKnown RBP7.62□□□□□ -1.19
SNHG1-223ENST00000545440 ACTN2P35609 894 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 LSSP48449 732 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 MARCKSL1P49006 195 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 SPINT3P49223 89 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 PDX1P52945 283 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 DCDC1P59894 354 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 GABREP78334 506 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 ILF3Q12906 894 aaKnown RBP eCLIP7.62□□□□□ -1.19
SNHG1-223ENST00000545440 CDK5R2Q13319 367 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 PEX6Q13608 980 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 LRP8Q14114 963 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 SPIDRQ14159 915 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 GALNT3Q14435 633 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 PTPRRQ15256 657 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 TCEA2Q15560 299 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 TBC1D25Q3MII6 688 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 C14orf28Q4W4Y0 310 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 TEX44Q53QW1 395 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 CERCAMQ5T4B2 595 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 HENMT1Q5T8I9 393 aaKnown RBP7.62□□□□□ -1.19
SNHG1-223ENST00000545440 OGFOD3Q6PK18 319 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 NPNTQ6UXI9 565 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 DAAM2Q86T65 1068 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 CCDC50Q8IVM0 306 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 RCOR2Q8IZ40 523 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 LSMEM2Q8N112 164 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 KIAA1524Q8TCG1 905 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 CCHCR1Q8TD31 782 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 TFB1MQ8WVM0 346 aaKnown RBP7.62□□□□□ -1.19
SNHG1-223ENST00000545440 P3H4Q92791 437 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 TADA1Q96BN2 335 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 COX14Q96I36 57 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 HIC2Q96JB3 615 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 AGAP3Q96P47 875 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 QKIQ96PU8 341 aaKnown RBP eCLIP7.62□□□□□ -1.19
SNHG1-223ENST00000545440 SMIM14Q96QK8 99 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 OR2M4Q96R27 311 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 TRIB3Q96RU7 358 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 VAT1Q99536 393 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 MLPHQ9BV36 600 aaPredicted RBP7.62□□□□□ -1.19
SNHG1-223ENST00000545440 ASPNQ9BXN1 380 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 SLC25A51Q9H1U9 297 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 POLR1BQ9H9Y6 1135 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 PKD2L2Q9NZM6 624 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms