RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	PRKAR1A	P10644	381 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	ERCC2	P18074	760 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	ITIH2	P19823	946 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	ITIH1	P19827	911 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	PSMA2	P25787	234 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	MIP	P30301	263 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	HPD	P32754	393 aa	Predicted RBP	6.39	□□□□□ -1.39
CIT-213	ENST00000543324	CTNNA1	P35221	906 aa	Known RBP	6.39	□□□□□ -1.39
CIT-213	ENST00000543324	PEX5	P50542	639 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	ARSE	P51690	589 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	TPI1	P60174	286 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	RHOA	P61586	193 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	IL10RB	Q08334	325 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	NSUN2	Q08J23	767 aa	Known RBP eCLIP	6.39	□□□□□ -1.39
CIT-213	ENST00000543324	LBR	Q14739	615 aa	Known RBP	6.39	□□□□□ -1.39
CIT-213	ENST00000543324	IRF4	Q15306	451 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	PPP1R7	Q15435	360 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	UGP2	Q16851	508 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	WSCD2	Q2TBF2	565 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	GALNTL6	Q49A17	601 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	TNFAIP8L3	Q5GJ75	292 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	LRRC73	Q5JTD7	316 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	ALG1L	Q6GMV1	187 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	ZCCHC8	Q6NZY4	707 aa	Known RBP	6.39	□□□□□ -1.39
CIT-213	ENST00000543324	GUSBP11	Q6P575	273 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	DCUN1D2	Q6PH85	259 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	BRAT1	Q6PJG6	821 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	CRTC1	Q6UUV9	634 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	CLEC9A	Q6UXN8	241 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	ARHGAP36	Q6ZRI8	547 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	TRPM8	Q7Z2W7	1104 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	EFL1	Q7Z2Z2	1120 aa	Known RBP	6.39	□□□□□ -1.39
CIT-213	ENST00000543324	TMC3	Q7Z5M5	1100 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	B3GNT8	Q7Z7M8	397 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	SPNS2	Q8IVW8	549 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	NXPE1	Q8N323	547 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	CBARP	Q8N350	705 aa	Predicted RBP	6.39	□□□□□ -1.39
CIT-213	ENST00000543324		Q8NA96	180 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	WDR48	Q8TAF3	677 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	TEKT4	Q8WW24	435 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	IFT81	Q8WYA0	676 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	FUBP1	Q96AE4	644 aa	Known RBP	6.39	□□□□□ -1.39
CIT-213	ENST00000543324	SPDL1	Q96EA4	605 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	STAMBPL1	Q96FJ0	436 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	EXOC2	Q96KP1	924 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	ZNF570	Q96NI8	536 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	ZNF599	Q96NL3	588 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	PSKH2	Q96QS6	385 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	RANBP9	Q96S59	729 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	DUSP23	Q9BVJ7	150 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	CLPB	Q9H078	707 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	CDH19	Q9H159	772 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	TCEAL2	Q9H3H9	227 aa	Predicted RBP	6.39	□□□□□ -1.39
CIT-213	ENST00000543324	PCDH12	Q9NPG4	1184 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	MBNL1	Q9NR56	388 aa	Known RBP	6.39	□□□□□ -1.39
CIT-213	ENST00000543324	SEPT11	Q9NVA2	429 aa	Known RBP	6.39	□□□□□ -1.39
CIT-213	ENST00000543324	UBA2	Q9UBT2	640 aa	Predicted RBP	6.39	□□□□□ -1.39
CIT-213	ENST00000543324	BAIAP2L1	Q9UHR4	511 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	SALL4	Q9UJQ4	1053 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	KCNMB2	Q9Y691	235 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	SCIN	Q9Y6U3	715 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324		A0A0A6YYK5	440 aa	Predicted RBP	6.38	□□□□□ -1.39
CIT-213	ENST00000543324	EME2	A4GXA9	379 aa	Predicted RBP	6.38	□□□□□ -1.39
CIT-213	ENST00000543324	NEMP2	A6NFY4	417 aa		6.38	□□□□□ -1.39
CIT-213	ENST00000543324	ARHGAP42	A6NI28	874 aa		6.38	□□□□□ -1.39
CIT-213	ENST00000543324	LMO7DN	F2Z398	122 aa		6.38	□□□□□ -1.39
CIT-213	ENST00000543324	EEF2K	O00418	725 aa	Known RBP	6.38	□□□□□ -1.39
CIT-213	ENST00000543324	NTN3	O00634	580 aa	Predicted RBP	6.38	□□□□□ -1.39
CIT-213	ENST00000543324	KCNN4	O15554	427 aa		6.38	□□□□□ -1.39
CIT-213	ENST00000543324	AQP9	O43315	295 aa		6.38	□□□□□ -1.39
CIT-213	ENST00000543324	MAFK	O60675	156 aa		6.38	□□□□□ -1.39
CIT-213	ENST00000543324	PALM	O75781	387 aa		6.38	□□□□□ -1.39
CIT-213	ENST00000543324	TM7SF2	O76062	418 aa		6.38	□□□□□ -1.39
CIT-213	ENST00000543324	AGT	P01019	485 aa		6.38	□□□□□ -1.39
CIT-213	ENST00000543324	CYP1A2	P05177	515 aa		6.38	□□□□□ -1.39
CIT-213	ENST00000543324	HOXC4	P09017	264 aa	Predicted RBP	6.38	□□□□□ -1.39
CIT-213	ENST00000543324	ALPPL2	P10696	532 aa		6.38	□□□□□ -1.39
CIT-213	ENST00000543324	TNFAIP3	P21580	790 aa		6.38	□□□□□ -1.39
CIT-213	ENST00000543324	IL4R	P24394	825 aa		6.38	□□□□□ -1.39
CIT-213	ENST00000543324	PCSK6	P29122	969 aa		6.38	□□□□□ -1.39
CIT-213	ENST00000543324	CXCR5	P32302	372 aa		6.38	□□□□□ -1.39
CIT-213	ENST00000543324	TRIM23	P36406	574 aa		6.38	□□□□□ -1.39
CIT-213	ENST00000543324	ETV5	P41161	510 aa		6.38	□□□□□ -1.39
CIT-213	ENST00000543324	PAPOLA	P51003	745 aa	Known RBP	6.38	□□□□□ -1.39
CIT-213	ENST00000543324	DNA2	P51530	1060 aa		6.38	□□□□□ -1.39
CIT-213	ENST00000543324	DRG2	P55039	364 aa	Known RBP	6.38	□□□□□ -1.39
CIT-213	ENST00000543324	NCALD	P61601	193 aa		6.38	□□□□□ -1.39
CIT-213	ENST00000543324	MRPS35	P82673	323 aa	Known RBP	6.38	□□□□□ -1.39
CIT-213	ENST00000543324	RAD51	Q06609	339 aa		6.38	□□□□□ -1.39
CIT-213	ENST00000543324	KLHL30	Q0D2K2	578 aa		6.38	□□□□□ -1.39
CIT-213	ENST00000543324	ELP6	Q0PNE2	266 aa		6.38	□□□□□ -1.39
CIT-213	ENST00000543324	PDE1C	Q14123	709 aa	Predicted RBP	6.38	□□□□□ -1.39
CIT-213	ENST00000543324	SPIDR	Q14159	915 aa		6.38	□□□□□ -1.39
CIT-213	ENST00000543324	IHH	Q14623	411 aa		6.38	□□□□□ -1.39
CIT-213	ENST00000543324	RFTN1	Q14699	578 aa	Predicted RBP	6.38	□□□□□ -1.39
CIT-213	ENST00000543324	ASIC2	Q16515	512 aa		6.38	□□□□□ -1.39
CIT-213	ENST00000543324	SLC18A3	Q16572	532 aa		6.38	□□□□□ -1.39
CIT-213	ENST00000543324	CDKN3	Q16667	212 aa		6.38	□□□□□ -1.39
CIT-213	ENST00000543324	ZNF630	Q2M218	657 aa	Predicted RBP	6.38	□□□□□ -1.39
CIT-213	ENST00000543324	TXNRD3NB	Q6F5E7	133 aa		6.38	□□□□□ -1.39

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