RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 PER2O15055 1255 aa13□□□□□ -0.33
TNC-212ENST00000542877 UNGP13051 313 aaPredicted RBP13□□□□□ -0.33
TNC-212ENST00000542877 DSC2Q02487 901 aa13□□□□□ -0.33
TNC-212ENST00000542877 LAPTM5Q13571 262 aa13□□□□□ -0.33
TNC-212ENST00000542877 PEX6Q13608 980 aa13□□□□□ -0.33
TNC-212ENST00000542877 PIK3R3Q92569 461 aa13□□□□□ -0.33
TNC-212ENST00000542877 DSN1Q9H410 356 aa13□□□□□ -0.33
TNC-212ENST00000542877 MAN2B2Q9Y2E5 1009 aa13□□□□□ -0.33
TNC-212ENST00000542877 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.99□□□□□ -0.33
TNC-212ENST00000542877 PMM2O15305 246 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 H6PDO95479 791 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 ANXA4P09525 319 aaPredicted RBP12.99□□□□□ -0.33
TNC-212ENST00000542877 CREB1P16220 341 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 TACR2P21452 398 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 RPIAP49247 311 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 DUSP28Q4G0W2 176 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 ACSBG2Q5FVE4 666 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 LDLRAP1Q5SW96 308 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 CHST15Q7LFX5 561 aaPredicted RBP12.99□□□□□ -0.33
TNC-212ENST00000542877 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.99□□□□□ -0.33
TNC-212ENST00000542877 TRPV3Q8NET8 790 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 DNAJB8Q8NHS0 232 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 PPP1R13LQ8WUF5 828 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 SLCO2A1Q92959 643 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 COQ10BQ9H8M1 238 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 CIDEBQ9UHD4 219 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 MAFBQ9Y5Q3 323 aaPredicted RBP12.99□□□□□ -0.33
TNC-212ENST00000542877 H3BM21 787 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 PIP5K1BO14986 540 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 SLC7A4O43246 635 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 NDUFS2O75306 463 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 MNDAP41218 407 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 NDST2P52849 883 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 C2orf80Q0P641 193 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 HERC3Q15034 1050 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 ASTE1Q2TB18 679 aaPredicted RBP12.99□□□□□ -0.33
TNC-212ENST00000542877 HSDL1Q3SXM5 330 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 LCN1P1Q5VSP4 162 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 ESRP1Q6NXG1 681 aaKnown RBP12.99□□□□□ -0.33
TNC-212ENST00000542877 EZH1Q92800 747 aaPredicted RBP12.99□□□□□ -0.33
TNC-212ENST00000542877 CLIP3Q96DZ5 547 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 C11orf24Q96F05 449 aaPredicted RBP12.99□□□□□ -0.33
TNC-212ENST00000542877 TTPALQ9BTX7 342 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 KAT8Q9H7Z6 458 aaKnown RBP12.99□□□□□ -0.33
TNC-212ENST00000542877 SP140LQ9H930 580 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 IGLV3-22A0A075B6J6 115 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 ABHD14A-ACY1A0A1B0GW23 586 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 SLURP2P0DP57 97 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 MAGP20916 626 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 SLC18A1P54219 525 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 PNLIPRP1P54315 467 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 GPR152Q8TDT2 470 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 TFAP2BQ92481 460 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 GOLGA2P5Q9HBQ8 144 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 GIN1Q9NXP7 522 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 GMIPQ9P107 970 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 KERAO60938 352 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 HSPA7P48741 367 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 SLC5A3P53794 718 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 HSF2Q03933 536 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 MPPE1Q53F39 396 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 NIPA2Q8N8Q9 360 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 TTC29Q8NA56 475 aaPredicted RBP12.99□□□□□ -0.33
TNC-212ENST00000542877 SPATA22Q8NHS9 363 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 FCGR1BQ92637 280 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 FCRL4Q96PJ5 515 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 SLC35C2Q9NQQ7 365 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 FZD10Q9ULW2 581 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 COQ4Q9Y3A0 265 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 OAS3Q9Y6K5 1087 aaKnown RBP12.99□□□□□ -0.33
TNC-212ENST00000542877 A0A1W2PRG6 482 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 TP73O15350 636 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 C1RP00736 705 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 KCNA10Q16322 511 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 OR6K2Q8NGY2 324 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 XAGE5Q8WWM1 108 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 NDRG1Q92597 394 aaKnown RBP12.99□□□□□ -0.33
TNC-212ENST00000542877 CHCHD6Q9BRQ6 235 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 ACAT2Q9BWD1 397 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 CD320Q9NPF0 282 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 HMGXB4Q9UGU5 601 aa12.99□□□□□ -0.33
TNC-212ENST00000542877 ZNF214Q9UL59 606 aaPredicted RBP12.99□□□□□ -0.33
TNC-212ENST00000542877 CNOT6Q9ULM6 557 aaKnown RBP12.99□□□□□ -0.33
TNC-212ENST00000542877 CXCR6O00574 342 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 MT-ND1P03886 318 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 RAP2AP10114 183 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 COL6A1P12109 1028 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 GDF10P55107 478 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 HNRNPDQ14103 355 aaKnown RBP12.98□□□□□ -0.33
TNC-212ENST00000542877 TEAD4Q15561 434 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 ZBTB6Q15916 424 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 OLFML2AQ68BL7 652 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 KIAA0930Q6ICG6 404 aaPredicted RBP12.98□□□□□ -0.33
TNC-212ENST00000542877 RTL4Q6ZR62 310 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 LDB1Q86U70 411 aaPredicted RBP12.98□□□□□ -0.33
TNC-212ENST00000542877 AHI1Q8N157 1196 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 SRFBP1Q8NEF9 429 aaKnown RBP12.98□□□□□ -0.33
TNC-212ENST00000542877 PCDH19Q8TAB3 1148 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 SLC38A4Q969I6 547 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 MAGEH1Q9H213 219 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms