RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 IPO7O95373 1038 aaKnown RBP15.37■□□□□ 0.05
VPS33A-206ENST00000542310 BRAFP15056 766 aa15.37■□□□□ 0.05
VPS33A-206ENST00000542310 IDSP22304 550 aa15.37■□□□□ 0.05
VPS33A-206ENST00000542310 SLC19A1P41440 591 aa15.37■□□□□ 0.05
VPS33A-206ENST00000542310 CHRNA4P43681 627 aa15.37■□□□□ 0.05
VPS33A-206ENST00000542310 CAPZBP47756 277 aa15.37■□□□□ 0.05
VPS33A-206ENST00000542310 GEMP55040 296 aa15.37■□□□□ 0.05
VPS33A-206ENST00000542310 MAP7Q14244 749 aa15.37■□□□□ 0.05
VPS33A-206ENST00000542310 LLGL1Q15334 1064 aa15.37■□□□□ 0.05
VPS33A-206ENST00000542310 SNAP47Q5SQN1 464 aa15.37■□□□□ 0.05
VPS33A-206ENST00000542310 CDKL3Q8IVW4 592 aaPredicted RBP15.37■□□□□ 0.05
VPS33A-206ENST00000542310 NLGN4XQ8N0W4 816 aa15.37■□□□□ 0.05
VPS33A-206ENST00000542310 NLGN4YQ8NFZ3 816 aaPredicted RBP15.37■□□□□ 0.05
VPS33A-206ENST00000542310 GDAP1Q8TB36 358 aa15.37■□□□□ 0.05
VPS33A-206ENST00000542310 BLOC1S5Q8TDH9 187 aa15.37■□□□□ 0.05
VPS33A-206ENST00000542310 EXTL1Q92935 676 aa15.37■□□□□ 0.05
VPS33A-206ENST00000542310 MRFAP1L1Q96HT8 127 aa15.37■□□□□ 0.05
VPS33A-206ENST00000542310 C9orf72Q96LT7 481 aa15.37■□□□□ 0.05
VPS33A-206ENST00000542310 TTC25Q96NG3 672 aa15.37■□□□□ 0.05
VPS33A-206ENST00000542310 PPP1R2P1Q96PQ5 205 aa15.37■□□□□ 0.05
VPS33A-206ENST00000542310 ARHGAP9Q9BRR9 750 aa15.37■□□□□ 0.05
VPS33A-206ENST00000542310 EFHD1Q9BUP0 239 aa15.37■□□□□ 0.05
VPS33A-206ENST00000542310 SLC12A9Q9BXP2 914 aa15.37■□□□□ 0.05
VPS33A-206ENST00000542310 SPRY4Q9C004 299 aa15.37■□□□□ 0.05
VPS33A-206ENST00000542310 TRIT1Q9H3H1 467 aaKnown RBP15.37■□□□□ 0.05
VPS33A-206ENST00000542310 OGFRQ9NZT2 677 aa15.37■□□□□ 0.05
VPS33A-206ENST00000542310 ZNF624Q9P2J8 865 aaPredicted RBP15.37■□□□□ 0.05
VPS33A-206ENST00000542310 PILRAQ9UKJ1 303 aa15.37■□□□□ 0.05
VPS33A-206ENST00000542310 DNAJC16Q9Y2G8 782 aa15.37■□□□□ 0.05
VPS33A-206ENST00000542310 PCDHA3Q9Y5H8 950 aa15.37■□□□□ 0.05
VPS33A-206ENST00000542310 DNMT3AQ9Y6K1 912 aaPredicted RBP15.37■□□□□ 0.05
VPS33A-206ENST00000542310 CCDC66A2RUB6 948 aa15.36■□□□□ 0.05
VPS33A-206ENST00000542310 KLHL33A6NCF5 533 aa15.36■□□□□ 0.05
VPS33A-206ENST00000542310 A8MU76 341 aa15.36■□□□□ 0.05
VPS33A-206ENST00000542310 J3QKU1 62 aa15.36■□□□□ 0.05
VPS33A-206ENST00000542310 NDUFA10O95299 355 aa15.36■□□□□ 0.05
VPS33A-206ENST00000542310 LIFP15018 202 aa15.36■□□□□ 0.05
VPS33A-206ENST00000542310 CTNNA2P26232 953 aa15.36■□□□□ 0.05
VPS33A-206ENST00000542310 MAP4P27816 1152 aaKnown RBP15.36■□□□□ 0.05
VPS33A-206ENST00000542310 HALP42357 657 aa15.36■□□□□ 0.05
VPS33A-206ENST00000542310 SEPT7Q16181 437 aaKnown RBP15.36■□□□□ 0.05
VPS33A-206ENST00000542310 FAM151BQ6UXP7 276 aa15.36■□□□□ 0.05
VPS33A-206ENST00000542310 PRSS42Q7Z5A4 293 aa15.36■□□□□ 0.05
VPS33A-206ENST00000542310 TMTC1Q8IUR5 882 aa15.36■□□□□ 0.05
VPS33A-206ENST00000542310 SLC25A41Q8N5S1 370 aa15.36■□□□□ 0.05
VPS33A-206ENST00000542310 EXD3Q8N9H8 876 aa15.36■□□□□ 0.05
VPS33A-206ENST00000542310 CXorf40BQ96DE9 158 aa15.36■□□□□ 0.05
VPS33A-206ENST00000542310 ZNF514Q96K75 400 aaPredicted RBP15.36■□□□□ 0.05
VPS33A-206ENST00000542310 C19orf43Q9BQ61 176 aa15.36■□□□□ 0.05
VPS33A-206ENST00000542310 RAB33BQ9H082 229 aa15.36■□□□□ 0.05
VPS33A-206ENST00000542310 ZNF768Q9H5H4 540 aaKnown RBP15.36■□□□□ 0.05
VPS33A-206ENST00000542310 SLC40A1Q9NP59 571 aa15.36■□□□□ 0.05
VPS33A-206ENST00000542310 BOD1L1Q8NFC6 3051 aa15.36■□□□□ 0.05
VPS33A-206ENST00000542310 ZNF891A8MT65 544 aaPredicted RBP15.35■□□□□ 0.05
VPS33A-206ENST00000542310 H7C0C1 242 aa15.35■□□□□ 0.05
VPS33A-206ENST00000542310 GAPDHSO14556 408 aaPredicted RBP15.35■□□□□ 0.05
VPS33A-206ENST00000542310 STK10O94804 968 aaKnown RBP15.35■□□□□ 0.05
VPS33A-206ENST00000542310 DLGAP3O95886 979 aa15.35■□□□□ 0.05
VPS33A-206ENST00000542310 RBL1P28749 1068 aa15.35■□□□□ 0.05
VPS33A-206ENST00000542310 ATP5OP48047 213 aa15.35■□□□□ 0.05
VPS33A-206ENST00000542310 GFERP55789 205 aa15.35■□□□□ 0.05
VPS33A-206ENST00000542310 ABHD18Q0P651 414 aa15.35■□□□□ 0.05
VPS33A-206ENST00000542310 CHRNA6Q15825 494 aa15.35■□□□□ 0.05
VPS33A-206ENST00000542310 TBR1Q16650 682 aa15.35■□□□□ 0.05
VPS33A-206ENST00000542310 CCDC181Q5TID7 509 aa15.35■□□□□ 0.05
VPS33A-206ENST00000542310 CYB5D1Q6P9G0 228 aa15.35■□□□□ 0.05
VPS33A-206ENST00000542310 AMZ2Q86W34 360 aa15.35■□□□□ 0.05
VPS33A-206ENST00000542310 ACTL9Q8TC94 416 aa15.35■□□□□ 0.05
VPS33A-206ENST00000542310 JPH3Q8WXH2 748 aaPredicted RBP15.35■□□□□ 0.05
VPS33A-206ENST00000542310 KIAA1143Q96AT1 154 aaPredicted RBP15.35■□□□□ 0.05
VPS33A-206ENST00000542310 SLC45A3Q96JT2 553 aa15.35■□□□□ 0.05
VPS33A-206ENST00000542310 CATSPER2Q96P56 530 aa15.35■□□□□ 0.05
VPS33A-206ENST00000542310 GORASP1Q9BQQ3 440 aa15.35■□□□□ 0.05
VPS33A-206ENST00000542310 OSBPL8Q9BZF1 889 aa15.35■□□□□ 0.05
VPS33A-206ENST00000542310 ADNPQ9H2P0 1102 aa15.35■□□□□ 0.05
VPS33A-206ENST00000542310 STARD5Q9NSY2 213 aa15.35■□□□□ 0.05
VPS33A-206ENST00000542310 EPHA6Q9UF33 1036 aa15.35■□□□□ 0.05
VPS33A-206ENST00000542310 KLHL3Q9UH77 587 aa15.35■□□□□ 0.05
VPS33A-206ENST00000542310 TFR2Q9UP52 801 aa15.35■□□□□ 0.05
VPS33A-206ENST00000542310 AAR2Q9Y312 384 aaKnown RBP15.35■□□□□ 0.05
VPS33A-206ENST00000542310 EPN1Q9Y6I3 576 aaPredicted RBP15.35■□□□□ 0.05
VPS33A-206ENST00000542310 SPTA1P02549 2419 aa15.34■□□□□ 0.05
VPS33A-206ENST00000542310 TLN1Q9Y490 2541 aaKnown RBP15.34■□□□□ 0.05
VPS33A-206ENST00000542310 SOWAHDA6NJG2 315 aa15.34■□□□□ 0.05
VPS33A-206ENST00000542310 F5H423 210 aaPredicted RBP15.34■□□□□ 0.05
VPS33A-206ENST00000542310 POLR1CO15160 346 aaPredicted RBP15.34■□□□□ 0.05
VPS33A-206ENST00000542310 STX7O15400 261 aaKnown RBP15.34■□□□□ 0.05
VPS33A-206ENST00000542310 STK17BO94768 372 aa15.34■□□□□ 0.05
VPS33A-206ENST00000542310 PRAMEF1O95521 474 aa15.34■□□□□ 0.05
VPS33A-206ENST00000542310 AMD1P17707 334 aa15.34■□□□□ 0.05
VPS33A-206ENST00000542310 RPL10P27635 214 aaKnown RBP15.34■□□□□ 0.05
VPS33A-206ENST00000542310 CETN2P41208 172 aa15.34■□□□□ 0.05
VPS33A-206ENST00000542310 ZNF75DP51815 510 aa15.34■□□□□ 0.05
VPS33A-206ENST00000542310 PDE1BQ01064 536 aa15.34■□□□□ 0.05
VPS33A-206ENST00000542310 OTUD4Q01804 1114 aaKnown RBP15.34■□□□□ 0.05
VPS33A-206ENST00000542310 GPR18Q14330 331 aa15.34■□□□□ 0.05
VPS33A-206ENST00000542310 TAF1AQ15573 450 aaPredicted RBP15.34■□□□□ 0.05
VPS33A-206ENST00000542310 CRTC2Q53ET0 693 aaPredicted RBP15.34■□□□□ 0.05
VPS33A-206ENST00000542310 GPRC6AQ5T6X5 926 aa15.34■□□□□ 0.05
VPS33A-206ENST00000542310 RASGEF1AQ8N9B8 481 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms