RNA–Protein interactions for RNA: ENST00000542165.1

CWC15-203, Transcript of CWC15 spliceosome associated protein homolog, humanhuman

TSL 1 (best)

Gene CWC15, Length 921 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CWC15-203ENST00000542165 THSD1Q9NS62 852 aa20.39■□□□□ 0.85
CWC15-203ENST00000542165 TRMT1Q9NXH9 659 aaKnown RBP20.39■□□□□ 0.85
CWC15-203ENST00000542165 CPNE7Q9UBL6 633 aa20.39■□□□□ 0.85
CWC15-203ENST00000542165 SLC23A2Q9UGH3 650 aa20.39■□□□□ 0.85
CWC15-203ENST00000542165 ATXN7L1Q9ULK2 861 aaPredicted RBP20.39■□□□□ 0.85
CWC15-203ENST00000542165 ACACAQ13085 2346 aa20.39■□□□□ 0.85
CWC15-203ENST00000542165 COL27A1Q8IZC6 1860 aaPredicted RBP20.39■□□□□ 0.85
CWC15-203ENST00000542165 FREM2Q5SZK8 3169 aa20.38■□□□□ 0.85
CWC15-203ENST00000542165 IGHV1OR21-1A0A087WYE8 117 aa20.38■□□□□ 0.85
CWC15-203ENST00000542165 PGRMC1O00264 195 aaKnown RBP20.38■□□□□ 0.85
CWC15-203ENST00000542165 TAF4O00268 1085 aa20.38■□□□□ 0.85
CWC15-203ENST00000542165 CES2O00748 559 aa20.38■□□□□ 0.85
CWC15-203ENST00000542165 POP7O75817 140 aaKnown RBP20.38■□□□□ 0.85
CWC15-203ENST00000542165 EML2O95834 649 aa20.38■□□□□ 0.85
CWC15-203ENST00000542165 VIPP01282 170 aa20.38■□□□□ 0.85
CWC15-203ENST00000542165 XRCC1P18887 633 aaPredicted RBP20.38■□□□□ 0.85
CWC15-203ENST00000542165 EPHA4P54764 986 aa20.38■□□□□ 0.85
CWC15-203ENST00000542165 BASP1P80723 227 aaKnown RBP20.38■□□□□ 0.85
CWC15-203ENST00000542165 SQSTM1Q13501 440 aa20.38■□□□□ 0.85
CWC15-203ENST00000542165 ZRANB3Q5FWF4 1079 aa20.38■□□□□ 0.85
CWC15-203ENST00000542165 ABRAXAS1Q6UWZ7 409 aa20.38■□□□□ 0.85
CWC15-203ENST00000542165 C11orf96Q7Z7L8 435 aa20.38■□□□□ 0.85
CWC15-203ENST00000542165 RBM12BQ8IXT5 1001 aaKnown RBP20.38■□□□□ 0.85
CWC15-203ENST00000542165 PRELID2Q8N945 189 aa20.38■□□□□ 0.85
CWC15-203ENST00000542165 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.38■□□□□ 0.85
CWC15-203ENST00000542165 RANBP9Q96S59 729 aa20.38■□□□□ 0.85
CWC15-203ENST00000542165 CMKLR1Q99788 373 aa20.38■□□□□ 0.85
CWC15-203ENST00000542165 FOXP3Q9BZS1 431 aa20.38■□□□□ 0.85
CWC15-203ENST00000542165 UCK1Q9HA47 277 aa20.38■□□□□ 0.85
CWC15-203ENST00000542165 POT1Q9NUX5 634 aa20.38■□□□□ 0.85
CWC15-203ENST00000542165 PIH1D1Q9NWS0 290 aaKnown RBP20.38■□□□□ 0.85
CWC15-203ENST00000542165 RIMKLBQ9ULI2 386 aa20.38■□□□□ 0.85
CWC15-203ENST00000542165 RAXQ9Y2V3 346 aa20.38■□□□□ 0.85
CWC15-203ENST00000542165 UNC13CQ8NB66 2214 aa20.38■□□□□ 0.85
CWC15-203ENST00000542165 CACNA1BQ00975 2339 aa20.37■□□□□ 0.85
CWC15-203ENST00000542165 GOLGA6L10A0A0M3HER8 536 aa20.37■□□□□ 0.85
CWC15-203ENST00000542165 MROH6A6NGR9 719 aa20.37■□□□□ 0.85
CWC15-203ENST00000542165 OR2AG2A6NM03 316 aa20.37■□□□□ 0.85
CWC15-203ENST00000542165 PLD2O14939 933 aa20.37■□□□□ 0.85
CWC15-203ENST00000542165 RRP8O43159 456 aaKnown RBP20.37■□□□□ 0.85
CWC15-203ENST00000542165 ADRA1DP25100 572 aa20.37■□□□□ 0.85
CWC15-203ENST00000542165 CD1CP29017 333 aa20.37■□□□□ 0.85
CWC15-203ENST00000542165 KCNJ1P48048 391 aa20.37■□□□□ 0.85
CWC15-203ENST00000542165 CTSCP53634 463 aa20.37■□□□□ 0.85
CWC15-203ENST00000542165 CDK16Q00536 496 aa20.37■□□□□ 0.85
CWC15-203ENST00000542165 CACNG1Q06432 222 aa20.37■□□□□ 0.85
CWC15-203ENST00000542165 ZFP36L1Q07352 338 aaKnown RBP20.37■□□□□ 0.85
CWC15-203ENST00000542165 TRA2AQ13595 282 aaKnown RBP eCLIP20.37■□□□□ 0.85
CWC15-203ENST00000542165 SEPT7Q16181 437 aaKnown RBP20.37■□□□□ 0.85
CWC15-203ENST00000542165 BCL7AQ4VC05 210 aa20.37■□□□□ 0.85
CWC15-203ENST00000542165 FNBP1LQ5T0N5 605 aa20.37■□□□□ 0.85
CWC15-203ENST00000542165 PHF19Q5T6S3 580 aa20.37■□□□□ 0.85
CWC15-203ENST00000542165 FOXR1Q6PIV2 292 aa20.37■□□□□ 0.85
CWC15-203ENST00000542165 LRRC69Q6ZNQ3 347 aa20.37■□□□□ 0.85
CWC15-203ENST00000542165 RAB11FIP2Q7L804 512 aa20.37■□□□□ 0.85
CWC15-203ENST00000542165 B3GNT8Q7Z7M8 397 aa20.37■□□□□ 0.85
CWC15-203ENST00000542165 FBXO39Q8N4B4 442 aa20.37■□□□□ 0.85
CWC15-203ENST00000542165 BEND7Q8N7W2 519 aaPredicted RBP20.37■□□□□ 0.85
CWC15-203ENST00000542165 SNIP1Q8TAD8 396 aaKnown RBP20.37■□□□□ 0.85
CWC15-203ENST00000542165 PEX13Q92968 403 aa20.37■□□□□ 0.85
CWC15-203ENST00000542165 CDKN2AIPNLQ96HQ2 116 aa20.37■□□□□ 0.85
CWC15-203ENST00000542165 OSBPL9Q96SU4 736 aa20.37■□□□□ 0.85
CWC15-203ENST00000542165 TTC1Q99614 292 aa20.37■□□□□ 0.85
CWC15-203ENST00000542165 VPS37BQ9H9H4 285 aa20.37■□□□□ 0.85
CWC15-203ENST00000542165 CASS4Q9NQ75 786 aa20.37■□□□□ 0.85
CWC15-203ENST00000542165 ZDHHC3Q9NYG2 299 aa20.37■□□□□ 0.85
CWC15-203ENST00000542165 APC2O95996 2303 aa20.37■□□□□ 0.85
CWC15-203ENST00000542165 LILRA5A6NI73 299 aa20.36■□□□□ 0.85
CWC15-203ENST00000542165 PRR19A6NJB7 356 aa20.36■□□□□ 0.85
CWC15-203ENST00000542165 CASC3O15234 703 aaKnown RBP20.36■□□□□ 0.85
CWC15-203ENST00000542165 JMJD7P0C870 316 aa20.36■□□□□ 0.85
CWC15-203ENST00000542165 ZSCAN5DPP0CG00 497 aa20.36■□□□□ 0.85
CWC15-203ENST00000542165 PCBP4P57723 403 aaKnown RBP20.36■□□□□ 0.85
CWC15-203ENST00000542165 UBE2IP63279 158 aaKnown RBP20.36■□□□□ 0.85
CWC15-203ENST00000542165 SARNPP82979 210 aaKnown RBP20.36■□□□□ 0.85
CWC15-203ENST00000542165 DET1Q7L5Y6 550 aa20.36■□□□□ 0.85
CWC15-203ENST00000542165 TAS2R42Q7RTR8 314 aa20.36■□□□□ 0.85
CWC15-203ENST00000542165 PRUNE1Q86TP1 453 aa20.36■□□□□ 0.85
CWC15-203ENST00000542165 SLITRK4Q8IW52 837 aa20.36■□□□□ 0.85
CWC15-203ENST00000542165 GLIS1Q8NBF1 620 aa20.36■□□□□ 0.85
CWC15-203ENST00000542165 PPHLN1Q8NEY8 458 aaKnown RBP20.36■□□□□ 0.85
CWC15-203ENST00000542165 OR4D9Q8NGE8 314 aa20.36■□□□□ 0.85
CWC15-203ENST00000542165 ACTRT1Q8TDG2 376 aa20.36■□□□□ 0.85
CWC15-203ENST00000542165 MAGOHBQ96A72 148 aaKnown RBP20.36■□□□□ 0.85
CWC15-203ENST00000542165 CXorf40BQ96DE9 158 aa20.36■□□□□ 0.85
CWC15-203ENST00000542165 SGF29Q96ES7 293 aa20.36■□□□□ 0.85
CWC15-203ENST00000542165 RDH14Q9HBH5 336 aa20.36■□□□□ 0.85
CWC15-203ENST00000542165 ANKRD11Q6UB99 2663 aaPredicted RBP20.36■□□□□ 0.85
CWC15-203ENST00000542165 KMT2BQ9UMN6 2715 aaPredicted RBP20.35■□□□□ 0.85
CWC15-203ENST00000542165 TRBV5-4A0A0C4DH59 114 aa20.35■□□□□ 0.85
CWC15-203ENST00000542165 MGAT4DA6NG13 374 aa20.35■□□□□ 0.85
CWC15-203ENST00000542165 HGSO14964 777 aaPredicted RBP20.35■□□□□ 0.85
CWC15-203ENST00000542165 ITGA2BP08514 1039 aa20.35■□□□□ 0.85
CWC15-203ENST00000542165 ATP1B2P14415 290 aaPredicted RBP20.35■□□□□ 0.85
CWC15-203ENST00000542165 PSMA3P25788 255 aa20.35■□□□□ 0.85
CWC15-203ENST00000542165 ACRV1P26436 265 aa20.35■□□□□ 0.85
CWC15-203ENST00000542165 RPL10P27635 214 aaKnown RBP20.35■□□□□ 0.85
CWC15-203ENST00000542165 CA5AP35218 305 aa20.35■□□□□ 0.85
CWC15-203ENST00000542165 TMEM71Q6P5X7 295 aa20.35■□□□□ 0.85
CWC15-203ENST00000542165 USP53Q70EK8 1073 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms