RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 RHBDF2Q6PJF5 856 aa3.22□□□□□ -1.89
USP28-210ENST00000542033 GLDNQ6ZMI3 551 aaPredicted RBP3.22□□□□□ -1.89
USP28-210ENST00000542033 CCDC13Q8IYE1 715 aa3.22□□□□□ -1.89
USP28-210ENST00000542033 SPATA6LQ8N4H0 392 aa3.22□□□□□ -1.89
USP28-210ENST00000542033 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.22□□□□□ -1.89
USP28-210ENST00000542033 POGLUT1Q8NBL1 392 aa3.22□□□□□ -1.89
USP28-210ENST00000542033 DNAAF4Q8WXU2 420 aa3.22□□□□□ -1.89
USP28-210ENST00000542033 ADGRG7Q96K78 797 aa3.22□□□□□ -1.89
USP28-210ENST00000542033 FAM84BQ96KN1 310 aaPredicted RBP3.22□□□□□ -1.89
USP28-210ENST00000542033 C3orf30Q96M34 536 aa3.22□□□□□ -1.89
USP28-210ENST00000542033 CTAGE1Q96RT6 745 aa3.22□□□□□ -1.89
USP28-210ENST00000542033 CSF3RQ99062 836 aa3.22□□□□□ -1.89
USP28-210ENST00000542033 HAUS8Q9BT25 410 aa3.22□□□□□ -1.89
USP28-210ENST00000542033 UTP14AQ9BVJ6 771 aaKnown RBP3.22□□□□□ -1.89
USP28-210ENST00000542033 ESRP2Q9H6T0 727 aaKnown RBP3.22□□□□□ -1.89
USP28-210ENST00000542033 PPP1R3EQ9H7J1 279 aa3.22□□□□□ -1.89
USP28-210ENST00000542033 NOX4Q9NPH5 578 aa3.22□□□□□ -1.89
USP28-210ENST00000542033 ABI3Q9P2A4 366 aa3.22□□□□□ -1.89
USP28-210ENST00000542033 MALT1Q9UDY8 824 aa3.22□□□□□ -1.89
USP28-210ENST00000542033 FBXL17Q9UF56 701 aa3.22□□□□□ -1.89
USP28-210ENST00000542033 ZNF112Q9UJU3 913 aa3.22□□□□□ -1.89
USP28-210ENST00000542033 RABL2BQ9UNT1 228 aa3.22□□□□□ -1.89
USP28-210ENST00000542033 ATP6V0A2Q9Y487 856 aa3.22□□□□□ -1.89
USP28-210ENST00000542033 CCL27Q9Y4X3 112 aa3.22□□□□□ -1.89
USP28-210ENST00000542033 PIK3R4Q99570 1358 aa3.22□□□□□ -1.89
USP28-210ENST00000542033 SPAG9O60271 1321 aaKnown RBP3.21□□□□□ -1.89
USP28-210ENST00000542033 SOS1Q07889 1333 aaPredicted RBP3.21□□□□□ -1.89
USP28-210ENST00000542033 RNF123Q5XPI4 1314 aa3.21□□□□□ -1.89
USP28-210ENST00000542033 PTPRGP23470 1445 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 PLSCR5A0PG75 271 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 DENND3A2RUS2 1198 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 PRSS44E7EML9 344 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 PLRG1O43660 514 aaKnown RBP3.21□□□□□ -1.9
USP28-210ENST00000542033 TBX10O75333 385 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 KIAA0754O94854 1291 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 SRPRAP08240 638 aaKnown RBP3.21□□□□□ -1.9
USP28-210ENST00000542033 SRCP12931 536 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 MAOAP21397 527 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 CHMLP26374 656 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 CAPZA2P47755 286 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 COMPP49747 757 aaPredicted RBP3.21□□□□□ -1.9
USP28-210ENST00000542033 CAMPP49913 170 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 LIG4P49917 911 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 STAT2P52630 851 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 MFAP4P55083 255 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 F2RL1P55085 397 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 SEC61BP60468 96 aaKnown RBP3.21□□□□□ -1.9
USP28-210ENST00000542033 PLIN5Q00G26 463 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 WASHC5Q12768 1159 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 TFCP2Q12800 502 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 KIF5AQ12840 1032 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 TRIM29Q14134 588 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 ZSCAN23Q3MJ62 389 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 C9orf152Q5JTZ5 239 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 HHATQ5VTY9 493 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 ADALQ6DHV7 355 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 HIST2H2BCQ6DN03 193 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 HIST2H2BDQ6DRA6 164 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 PLEKHA7Q6IQ23 1121 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 KRT80Q6KB66 452 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 WDR73Q6P4I2 378 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 DLK2Q6UY11 383 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 CCNI2Q6ZMN8 369 aaPredicted RBP3.21□□□□□ -1.9
USP28-210ENST00000542033 PQLC2Q6ZP29 291 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 C18orf65Q6ZTR6 163 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 SEPT14Q6ZU15 432 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 CCDC186Q7Z3E2 898 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 LINC00346Q8IVM7 164 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 NDUFAF2Q8N183 169 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 KRT222Q8N1A0 295 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 IQUBQ8NA54 791 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 TDRD5Q8NAT2 981 aaKnown RBP3.21□□□□□ -1.9
USP28-210ENST00000542033 ZNF114Q8NC26 417 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 SMRP1Q8NCR6 262 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 APPL2Q8NEU8 664 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 GSDMBQ8TAX9 411 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 MAGEC3Q8TD91 643 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 RND1Q92730 232 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 ARHGEF26Q96DR7 871 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 PGAP3Q96FM1 320 aaPredicted RBP3.21□□□□□ -1.9
USP28-210ENST00000542033 BICD1Q96G01 975 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 SCMH1Q96GD3 660 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 DHTKD1Q96HY7 919 aaPredicted RBP3.21□□□□□ -1.9
USP28-210ENST00000542033 ZNF385AQ96PM9 386 aaKnown RBP3.21□□□□□ -1.9
USP28-210ENST00000542033 DUX5Q96PT3 197 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 GCNAQ96QF7 691 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 ABHD1Q96SE0 405 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 PCGF1Q9BSM1 259 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 C1QTNF5Q9BXJ0 243 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 C1QTNF1Q9BXJ1 281 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 KLHL4Q9C0H6 718 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 IL25Q9H293 177 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 SLC28A3Q9HAS3 691 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 HOMER3Q9NSC5 361 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 PSD3Q9NYI0 1048 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 SMARCAL1Q9NZC9 954 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 SPATA7Q9P0W8 599 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 SEC63Q9UGP8 760 aaKnown RBP3.21□□□□□ -1.9
USP28-210ENST00000542033 PCSK1NQ9UHG2 260 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 TMCC3Q9ULS5 477 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms