RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 ZNF438Q7Z4V0 828 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 SPRED1Q7Z699 444 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 C11orf96Q7Z7L8 435 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 SLC9B2Q86UD5 537 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 SERPINA9Q86WD7 417 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 ZNF761Q86XN6 746 aaPredicted RBP9.08□□□□□ -0.96
SNHG1-215ENST00000540904 CREG2Q8IUH2 290 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 PIANPQ8IYJ0 282 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 CACTIN-AS1Q8N1I8 211 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 BEND7Q8N7W2 519 aaPredicted RBP9.08□□□□□ -0.96
SNHG1-215ENST00000540904 PPHLN1Q8NEY8 458 aaKnown RBP9.08□□□□□ -0.96
SNHG1-215ENST00000540904 OR13J1Q8NGT2 312 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 OR6P1Q8NGX9 317 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 WDR48Q8TAF3 677 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 ZNF514Q96K75 400 aaPredicted RBP9.08□□□□□ -0.96
SNHG1-215ENST00000540904 RANBP9Q96S59 729 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 FOXP3Q9BZS1 431 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 DDX47Q9H0S4 455 aaKnown RBP9.08□□□□□ -0.96
SNHG1-215ENST00000540904 STN1Q9H668 368 aaKnown RBP9.08□□□□□ -0.96
SNHG1-215ENST00000540904 CHRAC1Q9NRG0 131 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 KCND1Q9NSA2 647 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 ZDHHC3Q9NYG2 299 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 BFARQ9NZS9 450 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 FAM8A1Q9UBU6 413 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 ATXN7L1Q9ULK2 861 aaPredicted RBP9.08□□□□□ -0.96
SNHG1-215ENST00000540904 AK5Q9Y6K8 562 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 TRBV5-4A0A0C4DH59 114 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 KIR2DS5A0A0G2JLQ3 304 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 A0A0G2JNG1 304 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 OR5K4A6NMS3 321 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 D6RAR5 112 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 GOLGA8MH3BSY2 632 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 KIR2DS3K7RE56 304 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 ZW10O43264 779 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 B4GAT1O43505 415 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 AVILO75366 819 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 TMEM63AO94886 807 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 GOT2P00505 430 aaKnown RBP9.07□□□□□ -0.96
SNHG1-215ENST00000540904 PROS1P07225 676 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 ATP1B2P14415 290 aaPredicted RBP9.07□□□□□ -0.96
SNHG1-215ENST00000540904 BRAFP15056 766 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 PSMA3P25788 255 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 MGAT1P26572 445 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 CASQ1P31415 396 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 FOXN2P32314 431 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 PAFAH1B1P43034 410 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 MAGEA6P43360 314 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 GPR3P46089 330 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 FASLGP48023 281 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 NPY2RP49146 381 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 PPM1FP49593 454 aaPredicted RBP9.07□□□□□ -0.96
SNHG1-215ENST00000540904 SARNPP82979 210 aaKnown RBP9.07□□□□□ -0.96
SNHG1-215ENST00000540904 CYP4F3Q08477 520 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 NFE2L1Q14494 772 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 KCNJ11Q14654 390 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 KIR2DS5Q14953 304 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 DBN1Q16643 649 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 MAP9Q49MG5 647 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 BCL7AQ4VC05 210 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 NKAIN2Q5VXU1 208 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 LRRC8BQ6P9F7 803 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 AFTPHQ6ULP2 937 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 FAM83HQ6ZRV2 1179 aaPredicted RBP9.07□□□□□ -0.96
SNHG1-215ENST00000540904 USP53Q70EK8 1073 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 ZNF534Q76KX8 674 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 B3GNT8Q7Z7M8 397 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 TRIM48Q8IWZ4 208 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 KLHL7Q8IXQ5 586 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 MDM1Q8TC05 714 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 HEXDCQ8WVB3 486 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 ZCCHC14Q8WYQ9 949 aaKnown RBP9.07□□□□□ -0.96
SNHG1-215ENST00000540904 CPT1BQ92523 772 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.07□□□□□ -0.96
SNHG1-215ENST00000540904 NXPE2Q96DL1 559 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 ATXN7L3BQ96GX2 97 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 SLC38A3Q99624 504 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 IL22Q9GZX6 179 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 CCDC86Q9H6F5 360 aaKnown RBP9.07□□□□□ -0.96
SNHG1-215ENST00000540904 RDH14Q9HBH5 336 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 SARS2Q9NP81 518 aaKnown RBP9.07□□□□□ -0.96
SNHG1-215ENST00000540904 SYBUQ9NX95 663 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 KCNK4Q9NYG8 393 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 SCHIP1Q9P0W5 487 aaPredicted RBP9.07□□□□□ -0.96
SNHG1-215ENST00000540904 CPNE7Q9UBL6 633 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 ASIC3Q9UHC3 531 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 RIMKLBQ9ULI2 386 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 PSMD13Q9UNM6 376 aa9.07□□□□□ -0.96
SNHG1-215ENST00000540904 DNMT3AQ9Y6K1 912 aaPredicted RBP9.07□□□□□ -0.96
SNHG1-215ENST00000540904 SCN8AQ9UQD0 1980 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 IGLV3-16A0A075B6K0 115 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 TMEM8BA6NDV4 472 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 MGAT4DA6NG13 374 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 PRR19A6NJB7 356 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 OR52A4PA6NMU1 304 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 AGRPO00253 132 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 SGTAO43765 313 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 KCNJ13O60928 360 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 MPOP05164 745 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 POLBP06746 335 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 NMBRP28336 390 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms