RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	FLCN	Q8NFG4	579 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SLC35F5	Q8WV83	523 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	FGF13	Q92913	245 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	MYRFL	Q96LU7	910 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	NAT9	Q9BTE0	207 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SMOC2	Q9H3U7	446 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	FBRS	Q9HAH7	460 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	FANCE	Q9HB96	536 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	RCOR3	Q9P2K3	495 aa	Predicted RBP	5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	VTI1B	Q9UEU0	232 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	FADS3	Q9Y5Q0	445 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CFAP99	D6REC4	459 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	DFFA	O00273	331 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	LEFTY2	O00292	366 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	AURKA	O14965	403 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	NRP2	O60462	931 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TSPAN3	O60637	253 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SOAT2	O75908	522 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SNAP29	O95721	258 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TACR2	P21452	398 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	WEE1	P30291	646 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	MAPKAPK2	P49137	400 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CDH13	P55290	713 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SLC7A9	P82251	487 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TRIM16L	Q309B1	348 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	C6orf183	Q5T699	404 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TMEM214	Q6NUQ4	689 aa	Known RBP	5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783		Q7L0L9	218 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ERMP1	Q7Z2K6	904 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ZC3HC1	Q86WB0	502 aa	Known RBP	5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	RALGPS2	Q86X27	583 aa	Predicted RBP	5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	PARP8	Q8N3A8	854 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	OR2T34	Q8NGX1	318 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	OR2T3	Q8NH03	318 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	STYX	Q8WUJ0	223 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	EXT2	Q93063	718 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ASIC4	Q96FT7	647 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ELMO2	Q96JJ3	720 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SEPHS2	Q99611	448 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	LTB4R2	Q9NPC1	389 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	NDRG2	Q9UN36	371 aa	Known RBP	5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ACOT9	Q9Y305	439 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	RAD54B	Q9Y620	910 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	MYO9B	Q13459	2157 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ANKRD12	Q6UB98	2062 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	NEDD8-MDP1	E9PL57	170 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	INPP4B	O15327	924 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	MBTPS2	O43462	519 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	LAMTOR5	O43504	91 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	MAN1A2	O60476	641 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ZNF24	P17028	368 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	NFKB1	P19838	968 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	DRD1	P21728	446 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	PTPN3	P26045	913 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	RCVRN	P35243	200 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CDH4	P55283	916 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	NFATC3	Q12968	1075 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	NAB1	Q13506	487 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	RUNX3	Q13761	415 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	RGS21	Q2M5E4	152 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	KIF19	Q2TAC6	998 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	FUT11	Q495W5	492 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	RAP1GAP2	Q684P5	730 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	MSANTD2	Q6P1R3	559 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	RSPO2	Q6UXX9	243 aa	Predicted RBP	5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TMEM184A	Q6ZMB5	413 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TMEM135	Q86UB9	458 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TMEM173	Q86WV6	379 aa	Predicted RBP	5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CAMK1D	Q8IU85	385 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	RAVER1	Q8IY67	606 aa	Known RBP	5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TMCO5A	Q8N6Q1	288 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	HEXDC	Q8WVB3	486 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	OR8D1	Q8WZ84	308 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ELSPBP1	Q96BH3	223 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TAMM41	Q96BW9	452 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CELF6	Q96J87	481 aa	Known RBP	5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	UHRF1	Q96T88	793 aa	Predicted RBP	5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	P2RY13	Q9BPV8	354 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	MLPH	Q9BV36	600 aa	Predicted RBP	5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	IL22	Q9GZX6	179 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	RC3H2	Q9HBD1	1191 aa	Known RBP	5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CSNK1G1	Q9HCP0	422 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CD300A	Q9UGN4	299 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SLC2A6	Q9UGQ3	507 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SEPT3	Q9UH03	358 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	DAPK2	Q9UIK4	370 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	MTF2	Q9Y483	593 aa	Predicted RBP	5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	DHRS12	A0PJE2	317 aa		5.61	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	KRBA1	A5PL33	1030 aa		5.61	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	NOL3	O60936	208 aa	Known RBP	5.61	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	H2AFY	O75367	372 aa	Known RBP	5.61	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	OXSR1	O95747	527 aa	Predicted RBP	5.61	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	JCHAIN	P01591	159 aa		5.61	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	INHBB	P09529	407 aa		5.61	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	LAMP2	P13473	410 aa		5.61	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ZNF12	P17014	697 aa		5.61	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	RHOQ	P17081	205 aa		5.61	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CASP2	P42575	452 aa		5.61	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TAS2R39	P59534	338 aa		5.61	□□□□□ -1.51

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