RNA–Protein interactions for RNA: ENST00000540746.6

LSM14A-202, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2 BASIC

Gene LSM14A, Length 2,152 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-202ENST00000540746 TEX28O15482 410 aa20.68■□□□□ 0.9
LSM14A-202ENST00000540746 ZNF821O75541 412 aaPredicted RBP20.68■□□□□ 0.9
LSM14A-202ENST00000540746 SMIM18P0DKX4 95 aa20.68■□□□□ 0.9
LSM14A-202ENST00000540746 ITGB6P18564 788 aa20.68■□□□□ 0.9
LSM14A-202ENST00000540746 PRMT2P55345 433 aa20.68■□□□□ 0.9
LSM14A-202ENST00000540746 DEFB103AP81534 67 aa20.68■□□□□ 0.9
LSM14A-202ENST00000540746 NRF1Q16656 503 aa20.68■□□□□ 0.9
LSM14A-202ENST00000540746 CDKN3Q16667 212 aa20.68■□□□□ 0.9
LSM14A-202ENST00000540746 LIN52Q52LA3 116 aa20.68■□□□□ 0.9
LSM14A-202ENST00000540746 MTX3Q5HYI7 312 aa20.68■□□□□ 0.9
LSM14A-202ENST00000540746 Q6ZSR9 355 aa20.68■□□□□ 0.9
LSM14A-202ENST00000540746 BRINP2Q9C0B6 783 aa20.68■□□□□ 0.9
LSM14A-202ENST00000540746 NOL11Q9H8H0 719 aaKnown RBP20.68■□□□□ 0.9
LSM14A-202ENST00000540746 COQ10BQ9H8M1 238 aa20.68■□□□□ 0.9
LSM14A-202ENST00000540746 ZFYVE1Q9HBF4 777 aa20.68■□□□□ 0.9
LSM14A-202ENST00000540746 IL26Q9NPH9 171 aa20.68■□□□□ 0.9
LSM14A-202ENST00000540746 EGFL7Q9UHF1 273 aa20.68■□□□□ 0.9
LSM14A-202ENST00000540746 DOCK6Q96HP0 2047 aa20.67■□□□□ 0.9
LSM14A-202ENST00000540746 ZNF106Q9H2Y7 1883 aaKnown RBP20.67■□□□□ 0.9
LSM14A-202ENST00000540746 C1orf232A0A0U1RR37 186 aa20.67■□□□□ 0.9
LSM14A-202ENST00000540746 A0A1W2PP18 115 aa20.67■□□□□ 0.9
LSM14A-202ENST00000540746 HTRA2O43464 458 aaPredicted RBP20.67■□□□□ 0.9
LSM14A-202ENST00000540746 CLDN7O95471 211 aa20.67■□□□□ 0.9
LSM14A-202ENST00000540746 CHEK2O96017 543 aa20.67■□□□□ 0.9
LSM14A-202ENST00000540746 TRBC1P01850 177 aa20.67■□□□□ 0.9
LSM14A-202ENST00000540746 MRPL19P49406 292 aaKnown RBP20.67■□□□□ 0.9
LSM14A-202ENST00000540746 MAP7D1Q3KQU3 841 aa20.67■□□□□ 0.9
LSM14A-202ENST00000540746 COQ5Q5HYK3 327 aa20.67■□□□□ 0.9
LSM14A-202ENST00000540746 PAGE3Q5JUK9 113 aa20.67■□□□□ 0.9
LSM14A-202ENST00000540746 C6orf136Q5SQH8 315 aa20.67■□□□□ 0.9
LSM14A-202ENST00000540746 CERS6Q6ZMG9 384 aa20.67■□□□□ 0.9
LSM14A-202ENST00000540746 OR2T34Q8NGX1 318 aa20.67■□□□□ 0.9
LSM14A-202ENST00000540746 OR2T3Q8NH03 318 aa20.67■□□□□ 0.9
LSM14A-202ENST00000540746 VOPP1Q96AW1 172 aa20.67■□□□□ 0.9
LSM14A-202ENST00000540746 C2orf49Q9BVC5 232 aaPredicted RBP20.67■□□□□ 0.9
LSM14A-202ENST00000540746 Q9H521 79 aa20.67■□□□□ 0.9
LSM14A-202ENST00000540746 NUDT4Q9NZJ9 180 aa20.67■□□□□ 0.9
LSM14A-202ENST00000540746 TMCO1Q9UM00 188 aa20.67■□□□□ 0.9
LSM14A-202ENST00000540746 PCDHB1Q9Y5F3 818 aa20.67■□□□□ 0.9
LSM14A-202ENST00000540746 PCDHA9Q9Y5H5 950 aa20.67■□□□□ 0.9
LSM14A-202ENST00000540746 KIAA1671Q9BY89 1806 aa20.67■□□□□ 0.9
LSM14A-202ENST00000540746 HSD17B1P14061 328 aa20.66■□□□□ 0.9
LSM14A-202ENST00000540746 UGT1A6P19224 532 aa20.66■□□□□ 0.9
LSM14A-202ENST00000540746 UGT1A1P22309 533 aa20.66■□□□□ 0.9
LSM14A-202ENST00000540746 UGT1A4P22310 534 aa20.66■□□□□ 0.9
LSM14A-202ENST00000540746 IL12AP29459 219 aa20.66■□□□□ 0.9
LSM14A-202ENST00000540746 UGT1A3P35503 534 aa20.66■□□□□ 0.9
LSM14A-202ENST00000540746 UGT1A5P35504 534 aa20.66■□□□□ 0.9
LSM14A-202ENST00000540746 HNF1BP35680 557 aa20.66■□□□□ 0.9
LSM14A-202ENST00000540746 MNX1P50219 401 aaPredicted RBP20.66■□□□□ 0.9
LSM14A-202ENST00000540746 NFATC2Q13469 925 aa20.66■□□□□ 0.9
LSM14A-202ENST00000540746 ZSWIM9Q86XI8 627 aa20.66■□□□□ 0.9
LSM14A-202ENST00000540746 BBS7Q8IWZ6 715 aa20.66■□□□□ 0.9
LSM14A-202ENST00000540746 PBXIP1Q96AQ6 731 aa20.66■□□□□ 0.9
LSM14A-202ENST00000540746 SLC29A1Q99808 456 aa20.66■□□□□ 0.9
LSM14A-202ENST00000540746 C17orf80Q9BSJ5 609 aa20.66■□□□□ 0.9
LSM14A-202ENST00000540746 CLPBQ9H078 707 aa20.66■□□□□ 0.9
LSM14A-202ENST00000540746 TNKS2Q9H2K2 1166 aa20.66■□□□□ 0.9
LSM14A-202ENST00000540746 MYOFQ9NZM1 2061 aa20.66■□□□□ 0.9
LSM14A-202ENST00000540746 A8MX80 341 aa20.66■□□□□ 0.9
LSM14A-202ENST00000540746 OR7A17O14581 309 aa20.66■□□□□ 0.9
LSM14A-202ENST00000540746 TIPRLO75663 272 aa20.66■□□□□ 0.9
LSM14A-202ENST00000540746 BAIAP3O94812 1187 aa20.66■□□□□ 0.9
LSM14A-202ENST00000540746 HSPA8P11142 646 aaKnown RBP20.66■□□□□ 0.9
LSM14A-202ENST00000540746 GABRR2P28476 465 aa20.66■□□□□ 0.9
LSM14A-202ENST00000540746 HTR6P50406 440 aa20.66■□□□□ 0.9
LSM14A-202ENST00000540746 ERVK-8P63133 956 aa20.66■□□□□ 0.9
LSM14A-202ENST00000540746 MYBPC1Q00872 1141 aa20.66■□□□□ 0.9
LSM14A-202ENST00000540746 BCL2L1Q07817 233 aa20.66■□□□□ 0.9
LSM14A-202ENST00000540746 PTRHD1Q6GMV3 140 aaKnown RBP20.66■□□□□ 0.9
LSM14A-202ENST00000540746 RETSATQ6NUM9 610 aa20.66■□□□□ 0.9
LSM14A-202ENST00000540746 PRMT9Q6P2P2 845 aa20.66■□□□□ 0.9
LSM14A-202ENST00000540746 EFL1Q7Z2Z2 1120 aaKnown RBP20.66■□□□□ 0.9
LSM14A-202ENST00000540746 DDX53Q86TM3 631 aaKnown RBP20.66■□□□□ 0.9
LSM14A-202ENST00000540746 PIP4K2CQ8TBX8 421 aa20.66■□□□□ 0.9
LSM14A-202ENST00000540746 HBEGFQ99075 208 aa20.66■□□□□ 0.9
LSM14A-202ENST00000540746 ASB8Q9H765 288 aa20.66■□□□□ 0.9
LSM14A-202ENST00000540746 MRPL17Q9NRX2 175 aaKnown RBP20.66■□□□□ 0.9
LSM14A-202ENST00000540746 SLAMF8Q9P0V8 285 aa20.66■□□□□ 0.9
LSM14A-202ENST00000540746 GIPC1O14908 333 aa20.65■□□□□ 0.9
LSM14A-202ENST00000540746 CD70P32970 193 aa20.65■□□□□ 0.9
LSM14A-202ENST00000540746 LMAN2Q12907 356 aa20.65■□□□□ 0.9
LSM14A-202ENST00000540746 GRIK2Q13002 908 aa20.65■□□□□ 0.9
LSM14A-202ENST00000540746 PCBP2Q15366 365 aaKnown RBP eCLIP20.65■□□□□ 0.95e-7■■■□□ 16.3
LSM14A-202ENST00000540746 RABL3Q5HYI8 236 aa20.65■□□□□ 0.9
LSM14A-202ENST00000540746 DGKKQ5KSL6 1271 aa20.65■□□□□ 0.9
LSM14A-202ENST00000540746 TPGS1Q6ZTW0 290 aa20.65■□□□□ 0.9
LSM14A-202ENST00000540746 GOLGA7Q7Z5G4 137 aa20.65■□□□□ 0.9
LSM14A-202ENST00000540746 SPPL2CQ8IUH8 684 aa20.65■□□□□ 0.9
LSM14A-202ENST00000540746 TSPEARQ8WU66 669 aa20.65■□□□□ 0.9
LSM14A-202ENST00000540746 ZUFSPQ96AP4 578 aa20.65■□□□□ 0.9
LSM14A-202ENST00000540746 TMEM125Q96AQ2 219 aa20.65■□□□□ 0.9
LSM14A-202ENST00000540746 RNF208Q9H0X6 261 aa20.65■□□□□ 0.9
LSM14A-202ENST00000540746 NSUN3Q9H649 340 aaKnown RBP20.65■□□□□ 0.9
LSM14A-202ENST00000540746 GID8Q9NWU2 228 aa20.65■□□□□ 0.9
LSM14A-202ENST00000540746 SPG21Q9NZD8 308 aa20.65■□□□□ 0.9
LSM14A-202ENST00000540746 INTS6Q9UL03 887 aaKnown RBP20.65■□□□□ 0.9
LSM14A-202ENST00000540746 ZFC3H1O60293 1989 aaKnown RBP20.65■□□□□ 0.9
LSM14A-202ENST00000540746 SLC22A3O75751 556 aa20.65■□□□□ 0.9
LSM14A-202ENST00000540746 FESP07332 822 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms