RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 ERV3-1Q14264 604 aa11.79□□□□□ -0.52
CBX3P4-202ENST00000540428 GPR18Q14330 331 aa11.79□□□□□ -0.52
CBX3P4-202ENST00000540428 SEPT7Q16181 437 aaKnown RBP11.79□□□□□ -0.52
CBX3P4-202ENST00000540428 PCSK7Q16549 785 aa11.79□□□□□ -0.52
CBX3P4-202ENST00000540428 SLC18A3Q16572 532 aa11.79□□□□□ -0.52
CBX3P4-202ENST00000540428 PLA2G4EQ3MJ16 856 aa11.79□□□□□ -0.52
CBX3P4-202ENST00000540428 CACHD1Q5VU97 1274 aa11.79□□□□□ -0.52
CBX3P4-202ENST00000540428 CAVIN1Q6NZI2 390 aaKnown RBP11.79□□□□□ -0.52
CBX3P4-202ENST00000540428 KLHL35Q6PF15 583 aa11.79□□□□□ -0.52
CBX3P4-202ENST00000540428 C11orf96Q7Z7L8 435 aa11.79□□□□□ -0.52
CBX3P4-202ENST00000540428 APLFQ8IW19 511 aaPredicted RBP11.79□□□□□ -0.52
CBX3P4-202ENST00000540428 FAM26EQ8N5C1 309 aa11.79□□□□□ -0.52
CBX3P4-202ENST00000540428 TEX19Q8NA77 164 aa11.79□□□□□ -0.52
CBX3P4-202ENST00000540428 UBXN4Q92575 508 aa11.79□□□□□ -0.52
CBX3P4-202ENST00000540428 MIB2Q96AX9 1013 aa11.79□□□□□ -0.52
CBX3P4-202ENST00000540428 SLC41A2Q96JW4 573 aa11.79□□□□□ -0.52
CBX3P4-202ENST00000540428 AGAP3Q96P47 875 aa11.79□□□□□ -0.52
CBX3P4-202ENST00000540428 CEP41Q9BYV8 373 aa11.79□□□□□ -0.52
CBX3P4-202ENST00000540428 TRABDQ9H4I3 376 aa11.79□□□□□ -0.52
CBX3P4-202ENST00000540428 PDE7BQ9NP56 450 aa11.79□□□□□ -0.52
CBX3P4-202ENST00000540428 LHX9Q9NQ69 397 aa11.79□□□□□ -0.52
CBX3P4-202ENST00000540428 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.79□□□□□ -0.52
CBX3P4-202ENST00000540428 PADI1Q9ULC6 663 aa11.79□□□□□ -0.52
CBX3P4-202ENST00000540428 C3orf70A6NLC5 250 aaPredicted RBP11.78□□□□□ -0.52
CBX3P4-202ENST00000540428 OR52A4PA6NMU1 304 aa11.78□□□□□ -0.52
CBX3P4-202ENST00000540428 KIF1CO43896 1103 aaKnown RBP11.78□□□□□ -0.52
CBX3P4-202ENST00000540428 MTX2O75431 263 aa11.78□□□□□ -0.52
CBX3P4-202ENST00000540428 KATNA1O75449 491 aa11.78□□□□□ -0.52
CBX3P4-202ENST00000540428 FURINP09958 794 aa11.78□□□□□ -0.52
CBX3P4-202ENST00000540428 CASP14P31944 242 aa11.78□□□□□ -0.52
CBX3P4-202ENST00000540428 ARHGAP25P42331 645 aa11.78□□□□□ -0.52
CBX3P4-202ENST00000540428 PMS2P54278 862 aa11.78□□□□□ -0.52
CBX3P4-202ENST00000540428 DNASE1L3Q13609 305 aa11.78□□□□□ -0.52
CBX3P4-202ENST00000540428 MESDQ14696 234 aa11.78□□□□□ -0.52
CBX3P4-202ENST00000540428 ATP13A5Q4VNC0 1218 aa11.78□□□□□ -0.52
CBX3P4-202ENST00000540428 KHDC1Q4VXA5 237 aaKnown RBP11.78□□□□□ -0.52
CBX3P4-202ENST00000540428 TEX44Q53QW1 395 aa11.78□□□□□ -0.52
CBX3P4-202ENST00000540428 LRRC38Q5VT99 294 aa11.78□□□□□ -0.52
CBX3P4-202ENST00000540428 IRGCQ6NXR0 463 aa11.78□□□□□ -0.52
CBX3P4-202ENST00000540428 FAM92BQ6ZTR7 304 aa11.78□□□□□ -0.52
CBX3P4-202ENST00000540428 BZW1Q7L1Q6 419 aaKnown RBP11.78□□□□□ -0.52
CBX3P4-202ENST00000540428 LUZP1Q86V48 1076 aa11.78□□□□□ -0.52
CBX3P4-202ENST00000540428 ATCAYQ86WG3 371 aa11.78□□□□□ -0.52
CBX3P4-202ENST00000540428 KMT5CQ86Y97 462 aa11.78□□□□□ -0.52
CBX3P4-202ENST00000540428 TRAPPC5Q8IUR0 188 aa11.78□□□□□ -0.52
CBX3P4-202ENST00000540428 TEKT5Q96M29 485 aa11.78□□□□□ -0.52
CBX3P4-202ENST00000540428 TTC25Q96NG3 672 aa11.78□□□□□ -0.52
CBX3P4-202ENST00000540428 PACSIN1Q9BY11 444 aa11.78□□□□□ -0.52
CBX3P4-202ENST00000540428 ZCCHC2Q9C0B9 1178 aaKnown RBP11.78□□□□□ -0.52
CBX3P4-202ENST00000540428 GLOD4Q9HC38 313 aa11.78□□□□□ -0.52
CBX3P4-202ENST00000540428 LNPEPQ9UIQ6 1025 aa11.78□□□□□ -0.52
CBX3P4-202ENST00000540428 RARRES3Q9UL19 164 aa11.78□□□□□ -0.52
CBX3P4-202ENST00000540428 TMPRSS11EQ9UL52 423 aa11.78□□□□□ -0.52
CBX3P4-202ENST00000540428 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.78□□□□□ -0.52
CBX3P4-202ENST00000540428 DNMT3AQ9Y6K1 912 aaPredicted RBP11.78□□□□□ -0.52
CBX3P4-202ENST00000540428 DOPEY2Q9Y3R5 2298 aa11.77□□□□□ -0.52
CBX3P4-202ENST00000540428 A0A0A6YYK5 440 aaPredicted RBP11.77□□□□□ -0.53
CBX3P4-202ENST00000540428 LOC285095A0A1B0GVY8 99 aa11.77□□□□□ -0.53
CBX3P4-202ENST00000540428 SSU72P8A0A1W2PR75 194 aa11.77□□□□□ -0.53
CBX3P4-202ENST00000540428 CDC14CA4D256 554 aa11.77□□□□□ -0.53
CBX3P4-202ENST00000540428 AURKAO14965 403 aa11.77□□□□□ -0.53
CBX3P4-202ENST00000540428 MT-CYBP00156 380 aaPredicted RBP11.77□□□□□ -0.53
CBX3P4-202ENST00000540428 EPOP01588 193 aa11.77□□□□□ -0.53
CBX3P4-202ENST00000540428 FECHP22830 423 aa11.77□□□□□ -0.53
CBX3P4-202ENST00000540428 NR2C2P49116 596 aa11.77□□□□□ -0.53
CBX3P4-202ENST00000540428 DRG2P55039 364 aaKnown RBP11.77□□□□□ -0.53
CBX3P4-202ENST00000540428 ACY1Q03154 408 aa11.77□□□□□ -0.53
CBX3P4-202ENST00000540428 ASTE1Q2TB18 679 aaPredicted RBP11.77□□□□□ -0.53
CBX3P4-202ENST00000540428 ASB18Q6ZVZ8 466 aa11.77□□□□□ -0.53
CBX3P4-202ENST00000540428 AMZ2Q86W34 360 aa11.77□□□□□ -0.53
CBX3P4-202ENST00000540428 SIDT2Q8NBJ9 832 aaKnown RBP11.77□□□□□ -0.53
CBX3P4-202ENST00000540428 SPATA22Q8NHS9 363 aa11.77□□□□□ -0.53
CBX3P4-202ENST00000540428 GDAP1Q8TB36 358 aa11.77□□□□□ -0.53
CBX3P4-202ENST00000540428 ELMO2Q96JJ3 720 aa11.77□□□□□ -0.53
CBX3P4-202ENST00000540428 CD180Q99467 661 aa11.77□□□□□ -0.53
CBX3P4-202ENST00000540428 GPR87Q9BY21 358 aa11.77□□□□□ -0.53
CBX3P4-202ENST00000540428 TWSG1Q9GZX9 223 aa11.77□□□□□ -0.53
CBX3P4-202ENST00000540428 HACD3Q9P035 362 aa11.77□□□□□ -0.53
CBX3P4-202ENST00000540428 FAM153AQ9UHL3 310 aa11.77□□□□□ -0.53
CBX3P4-202ENST00000540428 TLK1Q9UKI8 766 aa11.77□□□□□ -0.53
CBX3P4-202ENST00000540428 PLAAQ9Y263 795 aa11.77□□□□□ -0.53
CBX3P4-202ENST00000540428 MAN2B2Q9Y2E5 1009 aa11.77□□□□□ -0.53
CBX3P4-202ENST00000540428 WDR37Q9Y2I8 494 aa11.77□□□□□ -0.53
CBX3P4-202ENST00000540428 SPO11Q9Y5K1 396 aa11.77□□□□□ -0.53
CBX3P4-202ENST00000540428 PIPSLA2A3N6 862 aa11.76□□□□□ -0.53
CBX3P4-202ENST00000540428 GOLGA6L19H0YKK7 550 aa11.76□□□□□ -0.53
CBX3P4-202ENST00000540428 K7EM74 188 aa11.76□□□□□ -0.53
CBX3P4-202ENST00000540428 MTSS1O43312 755 aa11.76□□□□□ -0.53
CBX3P4-202ENST00000540428 PMPCBO75439 489 aa11.76□□□□□ -0.53
CBX3P4-202ENST00000540428 NR1D1P20393 614 aa11.76□□□□□ -0.53
CBX3P4-202ENST00000540428 PTPN3P26045 913 aa11.76□□□□□ -0.53
CBX3P4-202ENST00000540428 SPAM1P38567 509 aa11.76□□□□□ -0.53
CBX3P4-202ENST00000540428 TUBB3Q13509 450 aa11.76□□□□□ -0.53
CBX3P4-202ENST00000540428 SEMA5AQ13591 1074 aa11.76□□□□□ -0.53
CBX3P4-202ENST00000540428 PRKD1Q15139 912 aaPredicted RBP11.76□□□□□ -0.53
CBX3P4-202ENST00000540428 RPE65Q16518 533 aa11.76□□□□□ -0.53
CBX3P4-202ENST00000540428 LDLRAP1Q5SW96 308 aa11.76□□□□□ -0.53
CBX3P4-202ENST00000540428 NPNTQ6UXI9 565 aa11.76□□□□□ -0.53
CBX3P4-202ENST00000540428 RHOT2Q8IXI1 618 aa11.76□□□□□ -0.53
CBX3P4-202ENST00000540428 CARFQ8N187 725 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms