RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 TBKBP1A7MCY6 615 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 COCHO43405 550 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 CHEK2O96017 543 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 ALDH2P05091 517 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 IDO1P14902 403 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 DNAJB1P25685 340 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 RPL38P63173 70 aaKnown RBP13.5□□□□□ -0.25
BNIP3-202ENST00000540159 RFTN2Q52LD8 501 aaPredicted RBP13.5□□□□□ -0.25
BNIP3-202ENST00000540159 C8orf82Q6P1X6 216 aaPredicted RBP13.5□□□□□ -0.25
BNIP3-202ENST00000540159 BBS5Q8N3I7 341 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 CD200R1Q8TD46 325 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 SKA2Q8WVK7 121 aaPredicted RBP13.5□□□□□ -0.25
BNIP3-202ENST00000540159 TFAP2CQ92754 450 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 ROPN1LQ96C74 230 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 EID2BQ96D98 161 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 AURKBQ96GD4 344 aaPredicted RBP13.5□□□□□ -0.25
BNIP3-202ENST00000540159 SCLYQ96I15 445 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 FUBP3Q96I24 572 aaKnown RBP eCLIP13.5□□□□□ -0.253e-9■■■□□ 17.3
BNIP3-202ENST00000540159 CLK4Q9HAZ1 481 aaKnown RBP13.5□□□□□ -0.25
BNIP3-202ENST00000540159 NLE1Q9NVX2 485 aaPredicted RBP13.5□□□□□ -0.25
BNIP3-202ENST00000540159 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.5□□□□□ -0.25
BNIP3-202ENST00000540159 A0A1W2PQ67 120 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 DRGXA6NNA5 263 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 ANKRD66B4E2M5 251 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 SH3BGRLO75368 114 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 PARNO95453 639 aaKnown RBP13.5□□□□□ -0.25
BNIP3-202ENST00000540159 FCGRTP55899 365 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 TXNL4AP83876 142 aaKnown RBP13.5□□□□□ -0.25
BNIP3-202ENST00000540159 ZNF177Q13360 481 aaPredicted RBP13.5□□□□□ -0.25
BNIP3-202ENST00000540159 ATP6AP1LQ52LC2 224 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 Q6ZSR9 355 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 SFRP1Q8N474 314 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 PROKR1Q8TCW9 393 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 LKAAEAR1Q8TD35 194 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 AUTS2Q8WXX7 1259 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 GFM2Q969S9 779 aaKnown RBP13.5□□□□□ -0.25
BNIP3-202ENST00000540159 GLT1D1Q96MS3 346 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 HACD3Q9P035 362 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 FADS3Q9Y5Q0 445 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 A0A1W2PP18 115 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 LCHNA4D1U4 455 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 NOBOXO60393 691 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 MAN1A2O60476 641 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 TMCC1O94876 653 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 TSPAN12O95859 305 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 GSNP06396 782 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 SLC2A4P14672 509 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 LPOP22079 712 aaPredicted RBP13.5□□□□□ -0.25
BNIP3-202ENST00000540159 GALNT1Q10472 559 aaPredicted RBP13.5□□□□□ -0.25
BNIP3-202ENST00000540159 LAPTM4AQ15012 233 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 ABRAXAS2Q15018 415 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 TRIM71Q2Q1W2 868 aaKnown RBP13.5□□□□□ -0.25
BNIP3-202ENST00000540159 GTDC1Q4AE62 458 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 PPP4R4Q6NUP7 873 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 AFTPHQ6ULP2 937 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 FAM126BQ8IXS8 530 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 WFDC5Q8TCV5 224 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 SLC22A12Q96S37 553 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 CHID1Q9BWS9 393 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 CIPCQ9C0C6 399 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 DERL2Q9GZP9 239 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 AGPAT4Q9NRZ5 378 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 MARCH5Q9NX47 278 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 TDRKHQ9Y2W6 561 aaKnown RBP13.5□□□□□ -0.25
BNIP3-202ENST00000540159 PCDHA9Q9Y5H5 950 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 ANKRD36A6QL64 1941 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 ESRRBO95718 433 aa13.49□□□□□ -0.25
BNIP3-202ENST00000540159 FGF4P08620 206 aa13.49□□□□□ -0.25
BNIP3-202ENST00000540159 ATP6V0D1P61421 351 aa13.49□□□□□ -0.25
BNIP3-202ENST00000540159 NFKB2Q00653 900 aa13.49□□□□□ -0.25
BNIP3-202ENST00000540159 ANKRD46Q86W74 232 aa13.49□□□□□ -0.25
BNIP3-202ENST00000540159 PHACTR4Q8IZ21 702 aa13.49□□□□□ -0.25
BNIP3-202ENST00000540159 OR4F6Q8NGB9 312 aa13.49□□□□□ -0.25
BNIP3-202ENST00000540159 BIRC7Q96CA5 298 aa13.49□□□□□ -0.25
BNIP3-202ENST00000540159 ITCHQ96J02 903 aa13.49□□□□□ -0.25
BNIP3-202ENST00000540159 PSKH2Q96QS6 385 aa13.49□□□□□ -0.25
BNIP3-202ENST00000540159 HOPXQ9BPY8 73 aaPredicted RBP13.49□□□□□ -0.25
BNIP3-202ENST00000540159 MGME1Q9BQP7 344 aa13.49□□□□□ -0.25
BNIP3-202ENST00000540159 HAUS8Q9BT25 410 aa13.49□□□□□ -0.25
BNIP3-202ENST00000540159 POLR1BQ9H9Y6 1135 aa13.49□□□□□ -0.25
BNIP3-202ENST00000540159 GALNT8Q9NY28 637 aa13.49□□□□□ -0.25
BNIP3-202ENST00000540159 DNMT3LQ9UJW3 386 aa13.49□□□□□ -0.25
BNIP3-202ENST00000540159 LRFN2Q9ULH4 789 aa13.49□□□□□ -0.25
BNIP3-202ENST00000540159 E2F3O00716 465 aa13.49□□□□□ -0.25
BNIP3-202ENST00000540159 PFDN1O60925 122 aa13.49□□□□□ -0.25
BNIP3-202ENST00000540159 TCF3P15923 654 aa13.49□□□□□ -0.25
BNIP3-202ENST00000540159 PSMD8P48556 350 aa13.49□□□□□ -0.25
BNIP3-202ENST00000540159 CLCN2P51788 898 aa13.49□□□□□ -0.25
BNIP3-202ENST00000540159 YBEYP58557 167 aaPredicted RBP13.49□□□□□ -0.25
BNIP3-202ENST00000540159 ARF5P84085 180 aa13.49□□□□□ -0.25
BNIP3-202ENST00000540159 IL1RL1Q01638 556 aa13.49□□□□□ -0.25
BNIP3-202ENST00000540159 AP5B1Q2VPB7 878 aa13.49□□□□□ -0.25
BNIP3-202ENST00000540159 PTRHD1Q6GMV3 140 aaKnown RBP13.49□□□□□ -0.25
BNIP3-202ENST00000540159 GLYATQ6IB77 296 aa13.49□□□□□ -0.25
BNIP3-202ENST00000540159 TMEM26Q6ZUK4 368 aa13.49□□□□□ -0.25
BNIP3-202ENST00000540159 STK32CQ86UX6 486 aa13.49□□□□□ -0.25
BNIP3-202ENST00000540159 CLEC4FQ8N1N0 589 aa13.49□□□□□ -0.25
BNIP3-202ENST00000540159 KRTCAP2Q8N6L1 136 aa13.49□□□□□ -0.25
BNIP3-202ENST00000540159 PDZD8Q8NEN9 1154 aa13.49□□□□□ -0.25
BNIP3-202ENST00000540159 ZNF599Q96NL3 588 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms