RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 SEC14L1Q92503 715 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 CFAP36Q96G28 342 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 CNDP2Q96KP4 475 aaKnown RBP12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 APOLD1Q96LR9 279 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 DUSP23Q9BVJ7 150 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 EPB41L5Q9HCM4 733 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 SPATS2LQ9NUQ6 558 aaKnown RBP12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 TAAR2Q9P1P5 351 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 SIRPGQ9P1W8 387 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 FTSJ1Q9UET6 329 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 GPR34Q9UPC5 381 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 TEX264Q9Y6I9 313 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 PRSS21Q9Y6M0 314 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 FAM169AQ9Y6X4 670 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 PIKFYVEQ9Y2I7 2098 aa12.52□□□□□ -0.4
TSPAN9-207ENST00000539631 CFAP99D6REC4 459 aa12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 OR1I1O60431 355 aa12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 POP7O75817 140 aaKnown RBP12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 KRT37O76014 449 aa12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 KCNK5O95279 499 aa12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 PBLDP30039 288 aaPredicted RBP12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 ID4P47928 161 aa12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 NOVA1P51513 510 aaKnown RBP12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 CAV1Q03135 178 aa12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 CBLBQ13191 982 aa12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 LRP8Q14114 963 aa12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 CRYMQ14894 314 aa12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 TRIP6Q15654 476 aaKnown RBP12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 LONRF1Q17RB8 773 aa12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 BCL7AQ4VC05 210 aa12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 SPANXN3Q5MJ09 141 aa12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 ZCCHC8Q6NZY4 707 aaKnown RBP12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 CERS6Q6ZMG9 384 aa12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 CENPUQ71F23 418 aa12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 UNC5BQ8IZJ1 945 aa12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 CLDN19Q8N6F1 224 aa12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 FAM181AQ8N9Y4 354 aa12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 FBXO36Q8NEA4 188 aa12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 SCG3Q8WXD2 468 aaKnown RBP12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 LRRC39Q96DD0 335 aa12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 CDC6Q99741 560 aa12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 TIMM29Q9BSF4 260 aa12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 NAT9Q9BTE0 207 aa12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 DPEP2Q9H4A9 486 aa12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 PLAC1Q9HBJ0 212 aa12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 KLC4Q9NSK0 619 aa12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 C20orf96Q9NUD7 363 aaPredicted RBP12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 DNAJC16Q9Y2G8 782 aa12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 CFAP54Q96N23 3096 aa12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 ARHGEF17Q96PE2 2063 aaPredicted RBP12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 ARID1BQ8NFD5 2236 aaPredicted RBP12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 CABIN1Q9Y6J0 2220 aa12.52□□□□□ -0.41
TSPAN9-207ENST00000539631 RIF1Q5UIP0 2472 aaKnown RBP12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 LY6G6EA0A0G2JKS1 128 aa12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 SPAARA0A1B0GVQ0 90 aa12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 B4DGG1 531 aa12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 TTC4O95801 387 aa12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 EML2O95834 649 aa12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 F7P08709 466 aaPredicted RBP12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 CEACAM1P13688 526 aa12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 KCNA4P22459 653 aa12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 NSG1P42857 185 aa12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 PRLHRP49683 370 aa12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 CLCNKAP51800 687 aa12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 DNAJC3Q13217 504 aa12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 THOC5Q13769 683 aaKnown RBP12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 PUM1Q14671 1186 aaKnown RBP eCLIP12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 AARS2Q5JTZ9 985 aaKnown RBP12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 MRNIPQ6NTE8 343 aa12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 NEPROQ6NW34 567 aa12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 PACS1Q6VY07 963 aa12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 UNC5AQ6ZN44 842 aa12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 CCNJLQ8IV13 435 aa12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 SLC35F3Q8IY50 421 aa12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 ZBED8Q8IZ13 594 aa12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 KYQ8NBH2 561 aa12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 GPR150Q8NGU9 434 aa12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 ZDHHC1Q8WTX9 485 aa12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 ZNF514Q96K75 400 aaPredicted RBP12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 TTC1Q99614 292 aa12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 OSGEPL1Q9H4B0 414 aa12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 SAYSD1Q9NPB0 183 aa12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 FAM114A2Q9NRY5 505 aa12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 ZDHHC18Q9NUE0 388 aa12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 GULP1Q9UBP9 304 aa12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 TBC1D29Q9UFV1 150 aa12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 ZC3H7BQ9UGR2 993 aaKnown RBP12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 DNMT3AQ9Y6K1 912 aaPredicted RBP12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 U3KQA8 63 aa12.51□□□□□ -0.41
TSPAN9-207ENST00000539631 TRBV23OR9-2A0A075B6M9 112 aa12.5□□□□□ -0.41
TSPAN9-207ENST00000539631 PRR19A6NJB7 356 aa12.5□□□□□ -0.41
TSPAN9-207ENST00000539631 EIF3HO15372 352 aaKnown RBP eCLIP12.5□□□□□ -0.41
TSPAN9-207ENST00000539631 TNFSF14O43557 240 aa12.5□□□□□ -0.41
TSPAN9-207ENST00000539631 NOBOXO60393 691 aa12.5□□□□□ -0.41
TSPAN9-207ENST00000539631 SNX2O60749 519 aa12.5□□□□□ -0.41
TSPAN9-207ENST00000539631 NDUFS3O75489 264 aa12.5□□□□□ -0.41
TSPAN9-207ENST00000539631 AP2A2O94973 939 aa12.5□□□□□ -0.41
TSPAN9-207ENST00000539631 RHOXF2BP0C7M4 288 aa12.5□□□□□ -0.41
TSPAN9-207ENST00000539631 ERVK-10P10266 1014 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms