RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 C5orf30Q96GV9 206 aa3.82□□□□□ -1.8
AC055720.1-201ENST00000539552 FBXL20Q96IG2 436 aa3.82□□□□□ -1.8
AC055720.1-201ENST00000539552 ZNF396Q96N95 335 aaPredicted RBP3.82□□□□□ -1.8
AC055720.1-201ENST00000539552 TRIB1Q96RU8 372 aa3.82□□□□□ -1.8
AC055720.1-201ENST00000539552 PARK7Q99497 189 aaKnown RBP3.82□□□□□ -1.8
AC055720.1-201ENST00000539552 EGFL8Q99944 293 aa3.82□□□□□ -1.8
AC055720.1-201ENST00000539552 CLSTN3Q9BQT9 956 aa3.82□□□□□ -1.8
AC055720.1-201ENST00000539552 CCDC77Q9BR77 488 aa3.82□□□□□ -1.8
AC055720.1-201ENST00000539552 LZTS2Q9BRK4 669 aa3.82□□□□□ -1.8
AC055720.1-201ENST00000539552 MOV10L1Q9BXT6 1211 aaKnown RBP3.82□□□□□ -1.8
AC055720.1-201ENST00000539552 PUS3Q9BZE2 481 aaKnown RBP3.82□□□□□ -1.8
AC055720.1-201ENST00000539552 HRH4Q9H3N8 390 aa3.82□□□□□ -1.8
AC055720.1-201ENST00000539552 TFB2MQ9H5Q4 396 aaKnown RBP3.82□□□□□ -1.8
AC055720.1-201ENST00000539552 EPHX3Q9H6B9 360 aa3.82□□□□□ -1.8
AC055720.1-201ENST00000539552 YY1AP1Q9H869 796 aa3.82□□□□□ -1.8
AC055720.1-201ENST00000539552 NGBQ9NPG2 151 aa3.82□□□□□ -1.8
AC055720.1-201ENST00000539552 TLR8Q9NR97 1041 aaKnown RBP3.82□□□□□ -1.8
AC055720.1-201ENST00000539552 FBXO28Q9NVF7 368 aa3.82□□□□□ -1.8
AC055720.1-201ENST00000539552 ARL8BQ9NVJ2 186 aa3.82□□□□□ -1.8
AC055720.1-201ENST00000539552 ERAP1Q9NZ08 941 aa3.82□□□□□ -1.8
AC055720.1-201ENST00000539552 ANKMY1Q9P2S6 941 aa3.82□□□□□ -1.8
AC055720.1-201ENST00000539552 CRNNQ9UBG3 495 aaPredicted RBP3.82□□□□□ -1.8
AC055720.1-201ENST00000539552 SLC23A1Q9UHI7 598 aa3.82□□□□□ -1.8
AC055720.1-201ENST00000539552 FBXW2Q9UKT8 454 aa3.82□□□□□ -1.8
AC055720.1-201ENST00000539552 ITGA11Q9UKX5 1188 aa3.82□□□□□ -1.8
AC055720.1-201ENST00000539552 NAALAD2Q9Y3Q0 740 aa3.82□□□□□ -1.8
AC055720.1-201ENST00000539552 PCDHA10Q9Y5I2 948 aa3.82□□□□□ -1.8
AC055720.1-201ENST00000539552 U3KQV3 271 aa3.82□□□□□ -1.8
AC055720.1-201ENST00000539552 CELSR3Q9NYQ7 3312 aa3.82□□□□□ -1.8
AC055720.1-201ENST00000539552 CHD7Q9P2D1 2997 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 ADGRB1O14514 1584 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 FAM186AA6NE01 2351 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 SPTBN2O15020 2390 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 PTPRZ1P23471 2315 aaPredicted RBP3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 TBC1D3DA0A087WVF3 549 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 TBC1D3IA0A087WXS9 549 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 TBC1D3EA0A087X179 549 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 TBC1D3KA0A087X1G2 549 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 EDDM13A0A1B0GTR0 161 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 TBC1D3BA6NDS4 549 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 TBC1D3FA6NER0 549 aaPredicted RBP3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 AGAP5A6NIR3 686 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 TBC1D3LB9A6J9 549 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 H0YIN7 160 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 PSMD9O00233 223 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 E2F3O00716 465 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 PER2O15055 1255 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 CLIC2O15247 247 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 POLR2DO15514 142 aaKnown RBP3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 SMAD6O43541 496 aaKnown RBP3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 SPRY1O43609 319 aaPredicted RBP3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 BUB1O43683 1085 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 LIASO43766 372 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 HS6ST1O60243 411 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 MFAP3LO75121 409 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 ERN1O75460 977 aaKnown RBP3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 IPO13O94829 963 aaKnown RBP3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 PTBP3O95758 552 aaKnown RBP3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 AK1P00568 194 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 MT-ATP6P00846 226 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 ITGB1P05556 798 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 S100A9P06702 114 aaKnown RBP3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 SRPRAP08240 638 aaKnown RBP3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 FAM58BPP0C7Q3 252 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 TBC1D3HP0C7X1 549 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 DPEP1P16444 411 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 CDH3P22223 829 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 PON1P27169 355 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 RBL1P28749 1068 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 CORO1AP31146 461 aaKnown RBP3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 SFNP31947 248 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 VPS41P49754 854 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 GATMP50440 423 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 ADCY7P51828 1080 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 NAGLUP54802 743 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 LILRA4P59901 499 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 KRTAP10-11P60412 298 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 SLC20A2Q08357 652 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 DUSP8Q13202 625 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 DDX39BQ13838 428 aaKnown RBP3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 CCNIQ14094 377 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 STK11Q15831 433 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 DPYSL2Q16555 572 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 SGCBQ16585 318 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 BMT2Q1RMZ1 405 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 AAK1Q2M2I8 961 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 CFAP221Q4G0U5 840 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 AARDQ4LEZ3 155 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 FASTKD1Q53R41 847 aaKnown RBP3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 RUNDC3AQ59EK9 446 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 ZNF667Q5HYK9 610 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 TCTE1Q5JU00 501 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 C6orf136Q5SQH8 315 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 CST9Q5W186 159 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 TBC1D3GQ6DHY5 549 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 TBC1D3CQ6IPX1 549 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 TAPT1Q6NXT6 567 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 FBXO46Q6PJ61 603 aaPredicted RBP3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 MOXD1Q6UVY6 613 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 PCSK4Q6UW60 755 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms