RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 OS9Q13438 667 aaPredicted RBP4.47□□□□□ -1.69
CCDC7-209ENST00000539197 RAB6CQ53S08 254 aa4.47□□□□□ -1.69
CCDC7-209ENST00000539197 PWWP2BQ6NUJ5 590 aa4.47□□□□□ -1.69
CCDC7-209ENST00000539197 GSTA5Q7RTV2 222 aa4.47□□□□□ -1.69
CCDC7-209ENST00000539197 ZNF611Q8N823 705 aa4.47□□□□□ -1.69
CCDC7-209ENST00000539197 OR1J2Q8NGS2 313 aa4.47□□□□□ -1.69
CCDC7-209ENST00000539197 AGAP3Q96P47 875 aa4.47□□□□□ -1.69
CCDC7-209ENST00000539197 RAB6CQ9H0N0 254 aa4.47□□□□□ -1.69
CCDC7-209ENST00000539197 PLCXD1Q9NUJ7 323 aa4.47□□□□□ -1.69
CCDC7-209ENST00000539197 CNOT8Q9UFF9 292 aaKnown RBP4.47□□□□□ -1.69
CCDC7-209ENST00000539197 CAMK2AQ9UQM7 478 aa4.47□□□□□ -1.69
CCDC7-209ENST00000539197 SRSF10O75494 262 aaKnown RBP4.46□□□□□ -1.7
CCDC7-209ENST00000539197 MOCS3O95396 460 aa4.46□□□□□ -1.7
CCDC7-209ENST00000539197 ANXA7P20073 488 aaKnown RBP4.46□□□□□ -1.7
CCDC7-209ENST00000539197 EPHA2P29317 976 aa4.46□□□□□ -1.7
CCDC7-209ENST00000539197 CTCFP49711 727 aaPredicted RBP4.46□□□□□ -1.7
CCDC7-209ENST00000539197 SP3Q02447 781 aa4.46□□□□□ -1.7
CCDC7-209ENST00000539197 PTP4A2Q12974 167 aa4.46□□□□□ -1.7
CCDC7-209ENST00000539197 OLIG2Q13516 323 aa4.46□□□□□ -1.7
CCDC7-209ENST00000539197 SLC9C2Q5TAH2 1124 aa4.46□□□□□ -1.7
CCDC7-209ENST00000539197 PM20D2Q8IYS1 436 aa4.46□□□□□ -1.7
CCDC7-209ENST00000539197 RASGEF1CQ8N431 466 aa4.46□□□□□ -1.7
CCDC7-209ENST00000539197 ZNRF4Q8WWF5 429 aa4.46□□□□□ -1.7
CCDC7-209ENST00000539197 ZNF300Q96RE9 604 aaPredicted RBP4.46□□□□□ -1.7
CCDC7-209ENST00000539197 SEMA3CQ99985 751 aa4.46□□□□□ -1.7
CCDC7-209ENST00000539197 RANBP17Q9H2T7 1088 aaKnown RBP4.46□□□□□ -1.7
CCDC7-209ENST00000539197 UBA2Q9UBT2 640 aaPredicted RBP4.46□□□□□ -1.7
CCDC7-209ENST00000539197 TBX20Q9UMR3 447 aa4.46□□□□□ -1.7
CCDC7-209ENST00000539197 IGLV7-46A0A075B6I9 117 aa4.45□□□□□ -1.7
CCDC7-209ENST00000539197 TRMUO75648 421 aaKnown RBP4.45□□□□□ -1.7
CCDC7-209ENST00000539197 NKX2-1P43699 371 aaPredicted RBP4.45□□□□□ -1.7
CCDC7-209ENST00000539197 CD81P60033 236 aa4.45□□□□□ -1.7
CCDC7-209ENST00000539197 NDUFAF5Q5TEU4 345 aa4.45□□□□□ -1.7
CCDC7-209ENST00000539197 TSSK4Q6SA08 328 aa4.45□□□□□ -1.7
CCDC7-209ENST00000539197 NOL8Q76FK4 1167 aaKnown RBP4.45□□□□□ -1.7
CCDC7-209ENST00000539197 ISCA2Q86U28 154 aa4.45□□□□□ -1.7
CCDC7-209ENST00000539197 SLC5A8Q8N695 610 aa4.45□□□□□ -1.7
CCDC7-209ENST00000539197 HM13Q8TCT9 377 aa4.45□□□□□ -1.7
CCDC7-209ENST00000539197 HVCN1Q96D96 273 aa4.45□□□□□ -1.7
CCDC7-209ENST00000539197 RTP3Q9BQQ7 232 aa4.45□□□□□ -1.7
CCDC7-209ENST00000539197 FAM120CQ9NX05 1096 aaKnown RBP4.45□□□□□ -1.7
CCDC7-209ENST00000539197 B3GALT5Q9Y2C3 310 aa4.45□□□□□ -1.7
CCDC7-209ENST00000539197 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.44□□□□□ -1.7
CCDC7-209ENST00000539197 TEX13DA0A0J9YY54 714 aaPredicted RBP4.44□□□□□ -1.7
CCDC7-209ENST00000539197 ATP2A1O14983 1001 aa4.44□□□□□ -1.7
CCDC7-209ENST00000539197 JRKO75564 520 aa4.44□□□□□ -1.7
CCDC7-209ENST00000539197 BMP10O95393 424 aa4.44□□□□□ -1.7
CCDC7-209ENST00000539197 ICAM1P05362 532 aa4.44□□□□□ -1.7
CCDC7-209ENST00000539197 WNT5AP41221 380 aa4.44□□□□□ -1.7
CCDC7-209ENST00000539197 PAFAH1B1P43034 410 aa4.44□□□□□ -1.7
CCDC7-209ENST00000539197 SLC6A12P48065 614 aa4.44□□□□□ -1.7
CCDC7-209ENST00000539197 MMP15P51511 669 aa4.44□□□□□ -1.7
CCDC7-209ENST00000539197 CTSCP53634 463 aa4.44□□□□□ -1.7
CCDC7-209ENST00000539197 GRAMD1BQ3KR37 738 aa4.44□□□□□ -1.7
CCDC7-209ENST00000539197 TCTEX1D4Q5JR98 221 aa4.44□□□□□ -1.7
CCDC7-209ENST00000539197 ARHGEF16Q5VV41 709 aa4.44□□□□□ -1.7
CCDC7-209ENST00000539197 SDCCAG8Q86SQ7 713 aaPredicted RBP4.44□□□□□ -1.7
CCDC7-209ENST00000539197 ANKRD18AQ8IVF6 992 aa4.44□□□□□ -1.7
CCDC7-209ENST00000539197 EMC1Q8N766 993 aa4.44□□□□□ -1.7
CCDC7-209ENST00000539197 SEMA4DQ92854 862 aa4.44□□□□□ -1.7
CCDC7-209ENST00000539197 TMEM143Q96AN5 459 aa4.44□□□□□ -1.7
CCDC7-209ENST00000539197 RNF125Q96EQ8 232 aa4.44□□□□□ -1.7
CCDC7-209ENST00000539197 SAAL1Q96ER3 474 aa4.44□□□□□ -1.7
CCDC7-209ENST00000539197 GIMAP5Q96F15 307 aa4.44□□□□□ -1.7
CCDC7-209ENST00000539197 FGFBP2Q9BYJ0 223 aa4.44□□□□□ -1.7
CCDC7-209ENST00000539197 MAGIXQ9H6Y5 334 aa4.44□□□□□ -1.7
CCDC7-209ENST00000539197 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.44□□□□□ -1.7
CCDC7-209ENST00000539197 YIPF1Q9Y548 306 aa4.44□□□□□ -1.7
CCDC7-209ENST00000539197 MAU2Q9Y6X3 613 aa4.44□□□□□ -1.7
CCDC7-209ENST00000539197 A0A087WW49 117 aa4.43□□□□□ -1.7
CCDC7-209ENST00000539197 PLPP2O43688 288 aa4.43□□□□□ -1.7
CCDC7-209ENST00000539197 CSPG5O95196 566 aa4.43□□□□□ -1.7
CCDC7-209ENST00000539197 NFKBIAP25963 317 aa4.43□□□□□ -1.7
CCDC7-209ENST00000539197 SHC1P29353 583 aa4.43□□□□□ -1.7
CCDC7-209ENST00000539197 F2RL1P55085 397 aa4.43□□□□□ -1.7
CCDC7-209ENST00000539197 TAF12Q16514 161 aa4.43□□□□□ -1.7
CCDC7-209ENST00000539197 PNLIPRP3Q17RR3 467 aa4.43□□□□□ -1.7
CCDC7-209ENST00000539197 ZNF805Q5CZA5 627 aa4.43□□□□□ -1.7
CCDC7-209ENST00000539197 FASTKD5Q7L8L6 764 aaKnown RBP4.43□□□□□ -1.7
CCDC7-209ENST00000539197 PTOV1Q86YD1 416 aa4.43□□□□□ -1.7
CCDC7-209ENST00000539197 OR2T12Q8NG77 320 aa4.43□□□□□ -1.7
CCDC7-209ENST00000539197 COQ3Q9NZJ6 369 aa4.43□□□□□ -1.7
CCDC7-209ENST00000539197 KANSL1LA0AUZ9 987 aa4.42□□□□□ -1.7
CCDC7-209ENST00000539197 EIF3CLB5ME19 914 aaKnown RBP4.42□□□□□ -1.7
CCDC7-209ENST00000539197 GPR137BO60478 399 aa4.42□□□□□ -1.7
CCDC7-209ENST00000539197 GCNT3O95395 438 aa4.42□□□□□ -1.7
CCDC7-209ENST00000539197 F9P00740 461 aa4.42□□□□□ -1.7
CCDC7-209ENST00000539197 FRMD6-AS1P0C7T7 363 aa4.42□□□□□ -1.7
CCDC7-209ENST00000539197 ACADSP16219 412 aa4.42□□□□□ -1.7
CCDC7-209ENST00000539197 CEBPBP17676 345 aa4.42□□□□□ -1.7
CCDC7-209ENST00000539197 ABCD3P28288 659 aa4.42□□□□□ -1.7
CCDC7-209ENST00000539197 TLX1P31314 330 aaPredicted RBP4.42□□□□□ -1.7
CCDC7-209ENST00000539197 PRCPP42785 496 aa4.42□□□□□ -1.7
CCDC7-209ENST00000539197 EIF3BP55884 814 aaKnown RBP4.42□□□□□ -1.7
CCDC7-209ENST00000539197 VAMP2P63027 116 aa4.42□□□□□ -1.7
CCDC7-209ENST00000539197 TLE2Q04725 743 aa4.42□□□□□ -1.7
CCDC7-209ENST00000539197 BAK1Q16611 211 aa4.42□□□□□ -1.7
CCDC7-209ENST00000539197 DOK6Q6PKX4 331 aa4.42□□□□□ -1.7
CCDC7-209ENST00000539197 Q6ZSR9 355 aa4.42□□□□□ -1.7
CCDC7-209ENST00000539197 CNTROBQ8N137 903 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms