RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 C11orf96Q7Z7L8 435 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 ZNF547Q8IVP9 402 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 KATNAL2Q8IYT4 538 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 TTC30BQ8N4P2 665 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 STARD8Q92502 1023 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 P3H4Q92791 437 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 CXorf40BQ96DE9 158 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 ZDHHC12Q96GR4 267 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 ZNF514Q96K75 400 aaPredicted RBP8.5□□□□□ -1.05
DDB1-212ENST00000538470 TTC25Q96NG3 672 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 QKIQ96PU8 341 aaKnown RBP eCLIP8.5□□□□□ -1.05
DDB1-212ENST00000538470 FCRL5Q96RD9 977 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 CTRCQ99895 268 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 ULBP3Q9BZM4 244 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 APMAPQ9HDC9 416 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 SLC40A1Q9NP59 571 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 ARFGAP3Q9NP61 516 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 LUC7LQ9NQ29 371 aaKnown RBP8.5□□□□□ -1.05
DDB1-212ENST00000538470 SMOXQ9NWM0 555 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 SCHIP1Q9P0W5 487 aaPredicted RBP8.5□□□□□ -1.05
DDB1-212ENST00000538470 KLHL8Q9P2G9 620 aaPredicted RBP8.5□□□□□ -1.05
DDB1-212ENST00000538470 ZNF624Q9P2J8 865 aaPredicted RBP8.5□□□□□ -1.05
DDB1-212ENST00000538470 EPHA6Q9UF33 1036 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 SLC23A2Q9UGH3 650 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 DNAJC16Q9Y2G8 782 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 PKP3Q9Y446 797 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 SPO11Q9Y5K1 396 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 NBASA2RRP1 2371 aa8.5□□□□□ -1.05
DDB1-212ENST00000538470 LRRK2Q5S007 2527 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 PIKFYVEQ9Y2I7 2098 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 hCG_1818297A0A087WSY0 165 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 GLYATL1P3A0A0U1RQE8 302 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 LOC101059948A0A1B0GTJ6 334 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 AKR1B15C9JRZ8 316 aaPredicted RBP8.49□□□□□ -1.05
DDB1-212ENST00000538470 APOC4-APOC2K7ER74 178 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 CST8O60676 142 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 MTX2O75431 263 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 ZNF189O75820 626 aaPredicted RBP8.49□□□□□ -1.05
DDB1-212ENST00000538470 RASSF9O75901 435 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 APOC2P02655 101 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 TNNT1P13805 278 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 BRAFP15056 766 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 PECAM1P16284 738 aaPredicted RBP8.49□□□□□ -1.05
DDB1-212ENST00000538470 TYRP1P17643 537 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 CD68P34810 354 aaPredicted RBP8.49□□□□□ -1.05
DDB1-212ENST00000538470 WNT3AP56704 352 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 FOXM1Q08050 763 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 TMEM115Q12893 351 aaPredicted RBP8.49□□□□□ -1.05
DDB1-212ENST00000538470 XRCC4Q13426 336 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 SEPT6Q14141 434 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 GPR18Q14330 331 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 SEPT7Q16181 437 aaKnown RBP8.49□□□□□ -1.05
DDB1-212ENST00000538470 SIRPB2Q5JXA9 342 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 KAZNQ674X7 775 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 C11orf63Q6NUN7 778 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 KLHL35Q6PF15 583 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 BBS12Q6ZW61 710 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 TIPARPQ7Z3E1 657 aaKnown RBP8.49□□□□□ -1.05
DDB1-212ENST00000538470 AMZ2Q86W34 360 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 GDAP1Q8TB36 358 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 KLHL6Q8WZ60 621 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 UBXN4Q92575 508 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 RSC1A1Q92681 617 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 TGM7Q96PF1 710 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 CD180Q99467 661 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 FERMT1Q9BQL6 677 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 FSD1LQ9BXM9 530 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 TRIM4Q9C037 500 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 RBSNQ9H1K0 784 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 IL26Q9NPH9 171 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 UBP1Q9NZI7 540 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 IL17CQ9P0M4 197 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 SEMA5BQ9P283 1151 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 IL17BQ9UHF5 180 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 ANAPC2Q9UJX6 822 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 TRHDEQ9UKU6 1024 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 TMPRSS11EQ9UL52 423 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.49□□□□□ -1.05
DDB1-212ENST00000538470 KCTD3Q9Y597 815 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 DNMT3AQ9Y6K1 912 aaPredicted RBP8.49□□□□□ -1.05
DDB1-212ENST00000538470 SLC30A1Q9Y6M5 507 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 RPS6KL1Q9Y6S9 549 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 DOPEY2Q9Y3R5 2298 aa8.49□□□□□ -1.05
DDB1-212ENST00000538470 NAV2Q8IVL1 2488 aa8.48□□□□□ -1.05
DDB1-212ENST00000538470 OR52A4PA6NMU1 304 aa8.48□□□□□ -1.05
DDB1-212ENST00000538470 AURKAO14965 403 aa8.48□□□□□ -1.05
DDB1-212ENST00000538470 ABCB7O75027 752 aa8.48□□□□□ -1.05
DDB1-212ENST00000538470 ANXA9O76027 345 aa8.48□□□□□ -1.05
DDB1-212ENST00000538470 ZRANB2O95218 330 aaKnown RBP eCLIP8.48□□□□□ -1.053e-9■□□□□ 8.6
DDB1-212ENST00000538470 NDUFA10O95299 355 aa8.48□□□□□ -1.05
DDB1-212ENST00000538470 LCA5LO95447 670 aa8.48□□□□□ -1.05
DDB1-212ENST00000538470 MT-ND3P03897 115 aa8.48□□□□□ -1.05
DDB1-212ENST00000538470 PYGMP11217 842 aa8.48□□□□□ -1.05
DDB1-212ENST00000538470 FGF5P12034 268 aa8.48□□□□□ -1.05
DDB1-212ENST00000538470 TCN2P20062 427 aa8.48□□□□□ -1.05
DDB1-212ENST00000538470 FECHP22830 423 aa8.48□□□□□ -1.05
DDB1-212ENST00000538470 RPL10P27635 214 aaKnown RBP8.48□□□□□ -1.05
DDB1-212ENST00000538470 OAS2P29728 719 aaKnown RBP8.48□□□□□ -1.05
DDB1-212ENST00000538470 CHRNA4P43681 627 aa8.48□□□□□ -1.05
DDB1-212ENST00000538470 LEPRP48357 1165 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms