RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 TSTD1Q8NFU3 115 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 ACTL9Q8TC94 416 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 COG1Q8WTW3 980 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 HMGB4Q8WW32 186 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 OR8D1Q8WZ84 308 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 TTC17Q96AE7 1141 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 HDAC11Q96DB2 347 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 ALG14Q96F25 216 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 AHCYL2Q96HN2 611 aaKnown RBP4.34□□□□□ -1.71
SNHG1-208ENST00000538266 PBKQ96KB5 322 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 LMLNQ96KR4 655 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 C20orf173Q96LM9 149 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 OLFM3Q96PB7 478 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 TSGA13Q96PP4 275 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 OSBPL9Q96SU4 736 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 RUFY1Q96T51 708 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 ACOX2Q99424 681 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 LGMNQ99538 433 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 CINPQ9BW66 212 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-208ENST00000538266 ACE2Q9BYF1 805 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-208ENST00000538266 FRMD8P1Q9BZ68 369 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-208ENST00000538266 TM6SF2Q9BZW4 377 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 KLC2Q9H0B6 622 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 TMEM245Q9H330 911 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 LRRC19Q9H756 370 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 YY1AP1Q9H869 796 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 ZDHHC4Q9NPG8 344 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 HOMER3Q9NSC5 361 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 ETNK2Q9NVF9 386 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 GOLGA6AQ9NYA3 693 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 THAP10Q9P2Z0 257 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-208ENST00000538266 SUN2Q9UH99 717 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 SLCO3A1Q9UIG8 710 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 MMP17Q9ULZ9 603 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 SNX12Q9UMY4 172 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 TTLL3Q9Y4R7 772 aa4.34□□□□□ -1.71
SNHG1-208ENST00000538266 F5P12259 2224 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 NYNRINQ9P2P1 1898 aaKnown RBP4.33□□□□□ -1.72
SNHG1-208ENST00000538266 MUC22E2RYF6 1773 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-208ENST00000538266 A0A087WUV0 522 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-208ENST00000538266 TTC34A8MYJ7 566 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 HACD1B0YJ81 288 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 WASH3PC4AMC7 463 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 C1QTNF3-AMACRE9PGA6 284 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 J3KR12 359 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 K7ERQ8 282 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 RNF103O00237 685 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 CES2O00748 559 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 MATN3O15232 486 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 ALOX15BO15296 676 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 KCNN4O15554 427 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 SMAD6O43541 496 aaKnown RBP4.33□□□□□ -1.72
SNHG1-208ENST00000538266 PI15O43692 258 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 PRICKLE3O43900 615 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-208ENST00000538266 OPHN1O60890 802 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 H2AFYO75367 372 aaKnown RBP4.33□□□□□ -1.72
SNHG1-208ENST00000538266 ZMPSTE24O75844 475 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 PRKD3O94806 890 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 APBB3O95704 486 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 POP4O95707 220 aaKnown RBP4.33□□□□□ -1.72
SNHG1-208ENST00000538266 GSRP00390 522 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 MT-CO1P00395 513 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 IL1BP01584 269 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 RBP3P10745 1247 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 ACADMP11310 421 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 SRCP12931 536 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 PRLRP16471 622 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 CA4P22748 312 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 CCNCP24863 283 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 TNFRSF8P28908 595 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 SERPINA4P29622 427 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 AVPR2P30518 371 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 PAFAH1B1P43034 410 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 PSMD8P48556 350 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 CCNHP51946 323 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-208ENST00000538266 GTF2A1P52655 376 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-208ENST00000538266 MANFP55145 182 aaKnown RBP4.33□□□□□ -1.72
SNHG1-208ENST00000538266 AP1S1P61966 158 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 SLC10A7Q0GE19 358 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 CCDC15Q0P6D6 951 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 SLC10A2Q12908 348 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-208ENST00000538266 KLF1Q13351 362 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-208ENST00000538266 ENPP2Q13822 863 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 BYSLQ13895 437 aaKnown RBP4.33□□□□□ -1.72
SNHG1-208ENST00000538266 HNRNPDQ14103 355 aaKnown RBP4.33□□□□□ -1.72
SNHG1-208ENST00000538266 GRM3Q14832 879 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 PRKD1Q15139 912 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-208ENST00000538266 NOMO1Q15155 1222 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 INO80DQ53TQ3 878 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-208ENST00000538266 SLC45A4Q5BKX6 768 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 ATXN7L2Q5T6C5 722 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-208ENST00000538266 FAM46CQ5VWP2 391 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 ZNF776Q68DI1 518 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-208ENST00000538266 ITPRIPL1Q6GPH6 555 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 ANO7Q6IWH7 933 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 AADACL2Q6P093 401 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 EMBQ6PCB8 327 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 KIAA1324Q6UXG2 1013 aaKnown RBP4.33□□□□□ -1.72
SNHG1-208ENST00000538266 USP30Q70CQ3 517 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 GSTA5Q7RTV2 222 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms