RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 OR10H3O60404 316 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 ADH1BP00325 375 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 F7P08709 466 aaPredicted RBP5.31□□□□□ -1.56
LRP6-203ENST00000538239 COX4I1P13073 169 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 AQP1P29972 269 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 GRIA3P42263 894 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 GDF10P55107 478 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 SLC25A3Q00325 362 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 SLC10A7Q0GE19 358 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 PON2Q15165 354 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 SLC35G1Q2M3R5 365 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 CLEC6AQ6EIG7 209 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 PDE12Q6L8Q7 609 aaKnown RBP5.31□□□□□ -1.56
LRP6-203ENST00000538239 MAMDC4Q6UXC1 1216 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 LYSMD3Q7Z3D4 306 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 FUKQ8N0W3 1084 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 UBR7Q8N806 425 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 NCSTNQ92542 709 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 SMOQ99835 787 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 CDADC1Q9BWV3 514 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 DTLQ9NZJ0 730 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 ILVBLA1L0T0 632 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 SERPINB7O75635 380 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 SLC22A3O75751 556 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 CLDN7O95471 211 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 ZCCHC18P0CG32 403 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 HNRNPH3P31942 346 aaKnown RBP5.3□□□□□ -1.56
LRP6-203ENST00000538239 MRPS22P82650 360 aaKnown RBP5.3□□□□□ -1.56
LRP6-203ENST00000538239 KLHL12Q53G59 568 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 MS4A13Q5J8X5 152 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 SIRPB2Q5JXA9 342 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 PIWIL4Q7Z3Z4 852 aaKnown RBP5.3□□□□□ -1.56
LRP6-203ENST00000538239 ZDHHC13Q8IUH4 622 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 KCTD13Q8WZ19 329 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 RNFT2Q96EX2 444 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 RBM18Q96H35 190 aaKnown RBP5.3□□□□□ -1.56
LRP6-203ENST00000538239 VPS35Q96QK1 796 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 PAAF1Q9BRP4 392 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 KLHL25Q9H0H3 589 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 HCN3Q9P1Z3 774 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 LAMB4A4D0S4 1761 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 PTGES3LE9PB15 166 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 PDE9AO76083 593 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 C2P06681 752 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 C8GP07360 202 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 PLGLB1Q02325 96 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 EPS8Q12929 822 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 NR1D2Q14995 579 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 CHRNA6Q15825 494 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 CYB5D1Q6P9G0 228 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 OFCC1Q8IZS5 231 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 PHF10Q8WUB8 498 aaKnown RBP5.3□□□□□ -1.56
LRP6-203ENST00000538239 XAGE5Q8WWM1 108 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 ESAMQ96AP7 390 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 RNF31Q96EP0 1072 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 BCL2L14Q9BZR8 327 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 ADAMTS10Q9H324 1103 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 SIX2Q9NPC8 291 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 GDAP2Q9NXN4 497 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 ENOPH1Q9UHY7 261 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 EIF2B4Q9UI10 523 aaKnown RBP5.3□□□□□ -1.56
LRP6-203ENST00000538239 AP3M1Q9Y2T2 418 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 M0R2N6 131 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 RECQL5O94762 991 aaPredicted RBP5.3□□□□□ -1.56
LRP6-203ENST00000538239 IPO13O94829 963 aaKnown RBP5.3□□□□□ -1.56
LRP6-203ENST00000538239 ANXA4P09525 319 aaPredicted RBP5.3□□□□□ -1.56
LRP6-203ENST00000538239 IDO1P14902 403 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 VARSP26640 1264 aaKnown RBP5.3□□□□□ -1.56
LRP6-203ENST00000538239 CDH5P33151 784 aaPredicted RBP5.3□□□□□ -1.56
LRP6-203ENST00000538239 BDKRB1P46663 353 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 CLCNKAP51800 687 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 UGT2B15P54855 530 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 ISLR2Q6UXK2 745 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 ADHFE1Q8IWW8 467 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 ZNF784Q8NCA9 323 aaPredicted RBP5.3□□□□□ -1.56
LRP6-203ENST00000538239 OR2AP1Q8NGE2 309 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 SUN3Q8TAQ9 357 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 TWIST2Q8WVJ9 160 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 PIGKQ92643 395 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 C19orf60Q96EN9 201 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 SLC47A1Q96FL8 570 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 PGM2Q96G03 612 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 GSDMCQ9BYG8 508 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 HDHD2Q9H0R4 259 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 SMOC2Q9H3U7 446 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 NSUN3Q9H649 340 aaKnown RBP5.3□□□□□ -1.56
LRP6-203ENST00000538239 CRTAC1Q9NQ79 661 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 DLGAP2Q9P1A6 1054 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 KCNK6Q9Y257 313 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 MFHAS1Q9Y4C4 1052 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 BTAF1O14981 1849 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 C2orf78A6NCI8 922 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 UPK3BL1B0FP48 263 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 C9J4A7 227 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 UPK3BL2E5RIL1 263 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 UNGP13051 313 aaPredicted RBP5.3□□□□□ -1.56
LRP6-203ENST00000538239 EFNA1P20827 205 aaPredicted RBP5.3□□□□□ -1.56
LRP6-203ENST00000538239 CPN2P22792 545 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 CSTF2P33240 577 aaKnown RBP eCLIP5.3□□□□□ -1.56
LRP6-203ENST00000538239 BMPR1AP36894 532 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms