RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 CLCN7P51798 805 aa15.44■□□□□ 0.06
SFSWAP-206ENST00000537582 PFN3P60673 137 aa15.44■□□□□ 0.06
SFSWAP-206ENST00000537582 RAB10P61026 200 aa15.44■□□□□ 0.06
SFSWAP-206ENST00000537582 DLG1Q12959 904 aa15.44■□□□□ 0.06
SFSWAP-206ENST00000537582 PLA2G4EQ3MJ16 856 aa15.44■□□□□ 0.06
SFSWAP-206ENST00000537582 HSP90B2PQ58FF3 399 aa15.44■□□□□ 0.06
SFSWAP-206ENST00000537582 CDHR3Q6ZTQ4 885 aa15.44■□□□□ 0.06
SFSWAP-206ENST00000537582 RAPH1Q70E73 1250 aa15.44■□□□□ 0.06
SFSWAP-206ENST00000537582 ZNF547Q8IVP9 402 aa15.44■□□□□ 0.06
SFSWAP-206ENST00000537582 PLD6Q8N2A8 252 aaKnown RBP15.44■□□□□ 0.06
SFSWAP-206ENST00000537582 OR13H1Q8NG92 308 aa15.44■□□□□ 0.06
SFSWAP-206ENST00000537582 ANKRD49Q8WVL7 239 aa15.44■□□□□ 0.06
SFSWAP-206ENST00000537582 COL25A1Q9BXS0 654 aaPredicted RBP15.44■□□□□ 0.06
SFSWAP-206ENST00000537582 SLC13A1Q9BZW2 595 aa15.44■□□□□ 0.06
SFSWAP-206ENST00000537582 MED4Q9NPJ6 270 aa15.44■□□□□ 0.06
SFSWAP-206ENST00000537582 MRPL40Q9NQ50 206 aaKnown RBP15.44■□□□□ 0.06
SFSWAP-206ENST00000537582 ZNF358Q9NW07 568 aa15.44■□□□□ 0.06
SFSWAP-206ENST00000537582 FAM8A1Q9UBU6 413 aa15.44■□□□□ 0.06
SFSWAP-206ENST00000537582 PNMA8BQ9ULN7 279 aaPredicted RBP15.44■□□□□ 0.06
SFSWAP-206ENST00000537582 CORO1CQ9ULV4 474 aaPredicted RBP15.44■□□□□ 0.06
SFSWAP-206ENST00000537582 USP34Q70CQ2 3546 aa15.44■□□□□ 0.06
SFSWAP-206ENST00000537582 CCDC163A0A0D9SF12 145 aa15.43■□□□□ 0.06
SFSWAP-206ENST00000537582 HMGB1P1B2RPK0 211 aaPredicted RBP15.43■□□□□ 0.06
SFSWAP-206ENST00000537582 CFAP99D6REC4 459 aa15.43■□□□□ 0.06
SFSWAP-206ENST00000537582 PRAMEF26H0Y7S4 382 aa15.43■□□□□ 0.06
SFSWAP-206ENST00000537582 LILRB5O75023 590 aa15.43■□□□□ 0.06
SFSWAP-206ENST00000537582 PYGLP06737 847 aa15.43■□□□□ 0.06
SFSWAP-206ENST00000537582 BRAFP15056 766 aa15.43■□□□□ 0.06
SFSWAP-206ENST00000537582 PBLDP30039 288 aaPredicted RBP15.43■□□□□ 0.06
SFSWAP-206ENST00000537582 CCR7P32248 378 aa15.43■□□□□ 0.06
SFSWAP-206ENST00000537582 CCNFP41002 786 aa15.43■□□□□ 0.06
SFSWAP-206ENST00000537582 SLC12A2P55011 1212 aa15.43■□□□□ 0.06
SFSWAP-206ENST00000537582 MPP2Q14168 576 aa15.43■□□□□ 0.06
SFSWAP-206ENST00000537582 TMEM220Q6QAJ8 160 aa15.43■□□□□ 0.06
SFSWAP-206ENST00000537582 PAQR3Q6TCH7 311 aa15.43■□□□□ 0.06
SFSWAP-206ENST00000537582 LONP2Q86WA8 852 aa15.43■□□□□ 0.06
SFSWAP-206ENST00000537582 LILRA3Q8N6C8 439 aaPredicted RBP15.43■□□□□ 0.06
SFSWAP-206ENST00000537582 CADM4Q8NFZ8 388 aa15.43■□□□□ 0.06
SFSWAP-206ENST00000537582 CD200R1Q8TD46 325 aa15.43■□□□□ 0.06
SFSWAP-206ENST00000537582 KCNJ9Q92806 393 aa15.43■□□□□ 0.06
SFSWAP-206ENST00000537582 MIR1-1HGQ9H1L0 117 aa15.43■□□□□ 0.06
SFSWAP-206ENST00000537582 FGF22Q9HCT0 170 aa15.43■□□□□ 0.06
SFSWAP-206ENST00000537582 PHPT1Q9NRX4 125 aaPredicted RBP15.43■□□□□ 0.06
SFSWAP-206ENST00000537582 TM7SF3Q9NS93 570 aa15.43■□□□□ 0.06
SFSWAP-206ENST00000537582 PLXND1Q9Y4D7 1925 aa15.43■□□□□ 0.06
SFSWAP-206ENST00000537582 MEI4A8MW99 385 aa15.42■□□□□ 0.06
SFSWAP-206ENST00000537582 E5RI56 91 aa15.42■□□□□ 0.06
SFSWAP-206ENST00000537582 TNFRSF10AO00220 468 aa15.42■□□□□ 0.06
SFSWAP-206ENST00000537582 HRO43593 1189 aa15.42■□□□□ 0.06
SFSWAP-206ENST00000537582 VPS26AO75436 327 aa15.42■□□□□ 0.06
SFSWAP-206ENST00000537582 CEACAM5P06731 702 aa15.42■□□□□ 0.06
SFSWAP-206ENST00000537582 RALBP11234 206 aa15.42■□□□□ 0.06
SFSWAP-206ENST00000537582 OAS2P29728 719 aaKnown RBP15.42■□□□□ 0.06
SFSWAP-206ENST00000537582 ATP5DP30049 168 aa15.42■□□□□ 0.06
SFSWAP-206ENST00000537582 SLC18A2Q05940 514 aa15.42■□□□□ 0.06
SFSWAP-206ENST00000537582 DNAJC3Q13217 504 aa15.42■□□□□ 0.06
SFSWAP-206ENST00000537582 SLC36A4Q6YBV0 504 aa15.42■□□□□ 0.06
SFSWAP-206ENST00000537582 Q6ZSR6 202 aa15.42■□□□□ 0.06
SFSWAP-206ENST00000537582 ABI3BPQ7Z7G0 1075 aa15.42■□□□□ 0.06
SFSWAP-206ENST00000537582 TRAPPC5Q8IUR0 188 aa15.42■□□□□ 0.06
SFSWAP-206ENST00000537582 CPNE9Q8IYJ1 553 aa15.42■□□□□ 0.06
SFSWAP-206ENST00000537582 CENPLQ8N0S6 344 aaPredicted RBP15.42■□□□□ 0.06
SFSWAP-206ENST00000537582 SLC22A18ASQ8N1D0 253 aa15.42■□□□□ 0.06
SFSWAP-206ENST00000537582 BANPQ8N9N5 519 aa15.42■□□□□ 0.06
SFSWAP-206ENST00000537582 KCTD4Q8WVF5 259 aa15.42■□□□□ 0.06
SFSWAP-206ENST00000537582 SMC6Q96SB8 1091 aa15.42■□□□□ 0.06
SFSWAP-206ENST00000537582 STMN4Q9H169 189 aaPredicted RBP15.42■□□□□ 0.06
SFSWAP-206ENST00000537582 GPAMQ9HCL2 828 aa15.42■□□□□ 0.06
SFSWAP-206ENST00000537582 TAS2R13Q9NYV9 303 aa15.42■□□□□ 0.06
SFSWAP-206ENST00000537582 DMTF1Q9Y222 760 aa15.42■□□□□ 0.06
SFSWAP-206ENST00000537582 ABCA7Q8IZY2 2146 aa15.42■□□□□ 0.06
SFSWAP-206ENST00000537582 ATXN2Q99700 1313 aaKnown RBP15.42■□□□□ 0.06
SFSWAP-206ENST00000537582 VEGFDO43915 354 aa15.41■□□□□ 0.06
SFSWAP-206ENST00000537582 WNT1P04628 370 aa15.41■□□□□ 0.06
SFSWAP-206ENST00000537582 OR56A5P0C7T3 313 aa15.41■□□□□ 0.06
SFSWAP-206ENST00000537582 CD27P26842 260 aa15.41■□□□□ 0.06
SFSWAP-206ENST00000537582 PRLHRP49683 370 aa15.41■□□□□ 0.06
SFSWAP-206ENST00000537582 PDAP1Q13442 181 aaKnown RBP15.41■□□□□ 0.06
SFSWAP-206ENST00000537582 TCEA2Q15560 299 aa15.41■□□□□ 0.06
SFSWAP-206ENST00000537582 C16orf46Q6P387 395 aa15.41■□□□□ 0.06
SFSWAP-206ENST00000537582 XKR5Q6UX68 686 aa15.41■□□□□ 0.06
SFSWAP-206ENST00000537582 KYAT3Q6YP21 454 aaKnown RBP15.41■□□□□ 0.06
SFSWAP-206ENST00000537582 HEXDCQ8WVB3 486 aa15.41■□□□□ 0.06
SFSWAP-206ENST00000537582 PDXPQ96GD0 296 aa15.41■□□□□ 0.06
SFSWAP-206ENST00000537582 SELENOSQ9BQE4 189 aa15.41■□□□□ 0.06
SFSWAP-206ENST00000537582 C1QTNF1Q9BXJ1 281 aa15.41■□□□□ 0.06
SFSWAP-206ENST00000537582 AASDHPPTQ9NRN7 309 aa15.41■□□□□ 0.06
SFSWAP-206ENST00000537582 GULP1Q9UBP9 304 aa15.41■□□□□ 0.06
SFSWAP-206ENST00000537582 SLC23A2Q9UGH3 650 aa15.41■□□□□ 0.06
SFSWAP-206ENST00000537582 TRMT6Q9UJA5 497 aaKnown RBP15.41■□□□□ 0.06
SFSWAP-206ENST00000537582 IKZF3Q9UKT9 509 aa15.41■□□□□ 0.06
SFSWAP-206ENST00000537582 COMMD10Q9Y6G5 202 aa15.41■□□□□ 0.06
SFSWAP-206ENST00000537582 WDFY4Q6ZS81 3184 aa15.41■□□□□ 0.06
SFSWAP-206ENST00000537582 H3BMM5 538 aa15.41■□□□□ 0.06
SFSWAP-206ENST00000537582 CACNB4O00305 520 aaPredicted RBP15.41■□□□□ 0.06
SFSWAP-206ENST00000537582 TYROBPO43914 113 aa15.41■□□□□ 0.06
SFSWAP-206ENST00000537582 NUAK1O60285 661 aa15.41■□□□□ 0.06
SFSWAP-206ENST00000537582 AP2A2O94973 939 aa15.41■□□□□ 0.06
SFSWAP-206ENST00000537582 MPOP05164 745 aa15.41■□□□□ 0.06
SFSWAP-206ENST00000537582 ZNF37AP17032 561 aaPredicted RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 274.4 ms