RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 PPM1FP49593 454 aaPredicted RBP10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 NCS1P62166 190 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 CD83Q01151 205 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 ALFQ53S48 1182 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 BSPRYQ5W0U4 402 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 TYW3Q6IPR3 259 aaKnown RBP10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 TRMT10BQ6PF06 316 aaKnown RBP10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 HACD2Q6Y1H2 254 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 ZNF600Q6ZNG1 722 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 KBTBD8Q8NFY9 601 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 UBASH3BQ8TF42 649 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 TUBGCP3Q96CW5 907 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 LGALS12Q96DT0 336 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 GATA5Q9BWX5 397 aaPredicted RBP10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 DPP3Q9NY33 737 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 CD300AQ9UGN4 299 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 STON1Q9Y6Q2 735 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 SCN9AQ15858 1988 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 OR5K4A6NMS3 321 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 DFNA5O60443 496 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 TSC22D2O75157 780 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 CYP2C18P33260 490 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 GP2P55259 537 aaKnown RBP10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 SNRPFP62306 86 aaKnown RBP10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 INCA1Q0VD86 236 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 FAPQ12884 760 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 DAG1Q14118 895 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 FAM214AQ32MH5 1076 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 STRADAQ7RTN6 431 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 TP53I13Q8NBR0 393 aaPredicted RBP10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 FANK1Q8TC84 345 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 ASIC4Q96FT7 647 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 MED10Q9BTT4 135 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 CCDC167Q9P0B6 97 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 FAM8A1Q9UBU6 413 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 MYO9BQ13459 2157 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 E2F8A0AVK6 867 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 TMEM191CA6NGB0 347 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 KATNA1O75449 491 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 SNAI1O95863 264 aaPredicted RBP10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 MPOP05164 745 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 DNAJB2P25686 324 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 SOX6P35712 828 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 HAAOP46952 286 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 ALDH3A2P51648 485 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 NOMO3P69849 1222 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 ANGPT1Q15389 498 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 LEXMQ3ZCV2 418 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 IL31RAQ8NI17 732 aa10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 DNAJA4Q8WW22 397 aaPredicted RBP10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 AURKBQ96GD4 344 aaPredicted RBP10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 HOPXQ9BPY8 73 aaPredicted RBP10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 RANGRFQ9HD47 186 aaPredicted RBP10.78□□□□□ -0.68
CLSTN3-207ENST00000537408 STK25O00506 426 aa10.77□□□□□ -0.68
CLSTN3-207ENST00000537408 ZBTB24O43167 697 aaPredicted RBP10.77□□□□□ -0.68
CLSTN3-207ENST00000537408 NDUFA2O43678 99 aa10.77□□□□□ -0.68
CLSTN3-207ENST00000537408 TNFRSF21O75509 655 aa10.77□□□□□ -0.68
CLSTN3-207ENST00000537408 ALDOAP04075 364 aaKnown RBP10.77□□□□□ -0.68
CLSTN3-207ENST00000537408 TNNI3P19429 210 aa10.77□□□□□ -0.68
CLSTN3-207ENST00000537408 SHMT2P34897 504 aa10.77□□□□□ -0.68
CLSTN3-207ENST00000537408 CCT3P49368 545 aaKnown RBP10.77□□□□□ -0.68
CLSTN3-207ENST00000537408 KLHL12Q53G59 568 aa10.77□□□□□ -0.68
CLSTN3-207ENST00000537408 C1orf186Q6ZWK4 172 aa10.77□□□□□ -0.68
CLSTN3-207ENST00000537408 STK32CQ86UX6 486 aa10.77□□□□□ -0.68
CLSTN3-207ENST00000537408 C4orf19Q8IY42 314 aa10.77□□□□□ -0.68
CLSTN3-207ENST00000537408 PARP16Q8N5Y8 322 aa10.77□□□□□ -0.68
CLSTN3-207ENST00000537408 SLC7A14Q8TBB6 771 aa10.77□□□□□ -0.68
CLSTN3-207ENST00000537408 KLHL6Q8WZ60 621 aa10.77□□□□□ -0.68
CLSTN3-207ENST00000537408 SLC7A6Q92536 515 aa10.77□□□□□ -0.68
CLSTN3-207ENST00000537408 SEMA4DQ92854 862 aa10.77□□□□□ -0.68
CLSTN3-207ENST00000537408 RNF34Q969K3 372 aa10.77□□□□□ -0.68
CLSTN3-207ENST00000537408 RDH12Q96NR8 316 aa10.77□□□□□ -0.68
CLSTN3-207ENST00000537408 SECISBP2Q96T21 854 aaKnown RBP10.77□□□□□ -0.68
CLSTN3-207ENST00000537408 GTSE1Q9NYZ3 720 aa10.77□□□□□ -0.68
CLSTN3-207ENST00000537408 ADAM28Q9UKQ2 775 aa10.77□□□□□ -0.68
CLSTN3-207ENST00000537408 SARDHQ9UL12 918 aa10.77□□□□□ -0.68
CLSTN3-207ENST00000537408 VWA7Q9Y334 891 aa10.77□□□□□ -0.68
CLSTN3-207ENST00000537408 A3GALT2U3KPV4 340 aa10.77□□□□□ -0.68
CLSTN3-207ENST00000537408 DICER1Q9UPY3 1922 aaKnown RBP10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 POLR2AP24928 1970 aaKnown RBP10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 CYP3A7-CYP3A51PA0A087WV96 503 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 ATP6AP2A0A1C7CYW4 349 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 MEIOCA2RUB1 952 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 CALCAP01258 141 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 DDCP20711 480 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 CBLP22681 906 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 CYP3A7P24462 503 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 SPRP35270 261 aaPredicted RBP10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 CENPAP49450 140 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 RAB14P61106 215 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 BAMBIQ13145 260 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 AAK1Q2M2I8 961 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 MCUQ8NE86 351 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 RDH11Q8TC12 318 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 CLEC4DQ8WXI8 215 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 TNIP3Q96KP6 325 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 MAGEB10Q96LZ2 347 aaPredicted RBP10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 SLIRPQ9GZT3 109 aaKnown RBP10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 ZNF385DQ9H6B1 395 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms