RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 LRP8Q14114 963 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 DGKKQ5KSL6 1271 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 TCHHL1Q5QJ38 904 aaPredicted RBP13.42□□□□□ -0.26
SMG6-203ENST00000536871 PDE12Q6L8Q7 609 aaKnown RBP13.42□□□□□ -0.26
SMG6-203ENST00000536871 CYHR1Q6ZMK1 362 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 NXPE1Q8N323 547 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 ZBTB2Q8N680 514 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 SHKBP1Q8TBC3 707 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 HCAR2Q8TDS4 363 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 IRF7Q92985 503 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 BHMTQ93088 406 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 TUBGCP3Q96CW5 907 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 LRIG1Q96JA1 1093 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 MTIF3Q9H2K0 278 aaKnown RBP13.42□□□□□ -0.26
SMG6-203ENST00000536871 TLR9Q9NR96 1032 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 SDR39U1Q9NRG7 319 aaPredicted RBP13.42□□□□□ -0.26
SMG6-203ENST00000536871 ZDHHC7Q9NXF8 308 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 KCTD5Q9NXV2 234 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 ZDHHC3Q9NYG2 299 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 CCDC167Q9P0B6 97 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 WASF2Q9Y6W5 498 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 OBSL1O75147 1896 aa13.41□□□□□ -0.26
SMG6-203ENST00000536871 GRXCR2A6NFK2 248 aa13.41□□□□□ -0.26
SMG6-203ENST00000536871 MRASO14807 208 aa13.41□□□□□ -0.26
SMG6-203ENST00000536871 KPNA5O15131 536 aa13.41□□□□□ -0.26
SMG6-203ENST00000536871 CLDN7O95471 211 aa13.41□□□□□ -0.26
SMG6-203ENST00000536871 OTCP00480 354 aa13.41□□□□□ -0.26
SMG6-203ENST00000536871 GPX3P22352 226 aa13.41□□□□□ -0.26
SMG6-203ENST00000536871 HLA-FP30511 346 aa13.41□□□□□ -0.26
SMG6-203ENST00000536871 RBBP7Q16576 425 aa13.41□□□□□ -0.26
SMG6-203ENST00000536871 SMU1Q2TAY7 513 aa13.41□□□□□ -0.26
SMG6-203ENST00000536871 IRAK1BP1Q5VVH5 260 aa13.41□□□□□ -0.26
SMG6-203ENST00000536871 CWF19L1Q69YN2 538 aaKnown RBP13.41□□□□□ -0.26
SMG6-203ENST00000536871 SULT1C3Q6IMI6 304 aa13.41□□□□□ -0.26
SMG6-203ENST00000536871 GK5Q6ZS86 529 aa13.41□□□□□ -0.26
SMG6-203ENST00000536871 AHI1Q8N157 1196 aa13.41□□□□□ -0.26
SMG6-203ENST00000536871 FAM136AQ96C01 138 aa13.41□□□□□ -0.26
SMG6-203ENST00000536871 DTNBP1Q96EV8 351 aa13.41□□□□□ -0.26
SMG6-203ENST00000536871 MARK4Q96L34 752 aa13.41□□□□□ -0.26
SMG6-203ENST00000536871 NR1H4Q96RI1 486 aaPredicted RBP13.41□□□□□ -0.26
SMG6-203ENST00000536871 SARS2Q9NP81 518 aaKnown RBP13.41□□□□□ -0.26
SMG6-203ENST00000536871 SEMA4BQ9NPR2 832 aaPredicted RBP13.41□□□□□ -0.26
SMG6-203ENST00000536871 SPHK2Q9NRA0 654 aa13.41□□□□□ -0.26
SMG6-203ENST00000536871 PLK2Q9NYY3 685 aa13.41□□□□□ -0.26
SMG6-203ENST00000536871 PPM1HQ9ULR3 514 aa13.41□□□□□ -0.26
SMG6-203ENST00000536871 FNDC3AQ9Y2H6 1198 aaKnown RBP13.41□□□□□ -0.26
SMG6-203ENST00000536871 QSOX1O00391 747 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 E2F3O00716 465 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 GAPDHSO14556 408 aaPredicted RBP13.4□□□□□ -0.26
SMG6-203ENST00000536871 SCAMP3O14828 347 aaKnown RBP13.4□□□□□ -0.26
SMG6-203ENST00000536871 ANGPT2O15123 496 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 CFLARO15519 480 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 NPPAP01160 153 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 RB1P06400 928 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 ENO2P09104 434 aaPredicted RBP13.4□□□□□ -0.26
SMG6-203ENST00000536871 HGFP14210 728 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 CTNNB1P35222 781 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 THOP1P52888 689 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 TRIM25Q14258 630 aaKnown RBP13.4□□□□□ -0.26
SMG6-203ENST00000536871 PPP1R3AQ16821 1122 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 MAP7D1Q3KQU3 841 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 XKR7Q5GH72 579 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 PRR23BQ6ZRT6 265 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 RPS27LQ71UM5 84 aaKnown RBP13.4□□□□□ -0.26
SMG6-203ENST00000536871 GALNT13Q8IUC8 556 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 PHYKPLQ8IUZ5 450 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 RAVER1Q8IY67 606 aaKnown RBP13.4□□□□□ -0.26
SMG6-203ENST00000536871 GOLM1Q8NBJ4 401 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 TTC16Q8NEE8 873 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 UBTD2Q8WUN7 234 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 SMIM14Q96QK8 99 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 SLC30A3Q99726 388 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 BBS2Q9BXC9 721 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 KLHL4Q9C0H6 718 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 TNKS2Q9H2K2 1166 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 VCXQ9H320 206 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 PKD2L2Q9NZM6 624 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 GALPQ9UBC7 116 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 PCDHGA7Q9Y5G6 932 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 IFRD1O00458 451 aaPredicted RBP13.4□□□□□ -0.26
SMG6-203ENST00000536871 FFAR2O15552 330 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 ARHGEF15O94989 841 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 SLC25A14O95258 325 aaPredicted RBP13.4□□□□□ -0.26
SMG6-203ENST00000536871 PRAMEF12O95522 483 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 ASLP04424 464 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 OR56A5P0C7T3 313 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 VCLP18206 1134 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 TSPAN8P19075 237 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 WEE1P30291 646 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 CEACAM7Q14002 265 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 CHRNA6Q15825 494 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 FUT11Q495W5 492 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 PDCD4Q53EL6 469 aaKnown RBP13.4□□□□□ -0.26
SMG6-203ENST00000536871 RARS2Q5T160 578 aaKnown RBP13.4□□□□□ -0.26
SMG6-203ENST00000536871 GPRC6AQ5T6X5 926 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 CRTC1Q6UUV9 634 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 KIAA0907Q7Z7F0 614 aaPredicted RBP13.4□□□□□ -0.26
SMG6-203ENST00000536871 PQLC1Q8N2U9 271 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 TCAIMQ8N3R3 496 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 SPDYE1Q8NFV5 336 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms