RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 UGT1A3P35503 534 aa17.61■□□□□ 0.41
TNFRSF1A-209ENST00000536717 UGT1A5P35504 534 aa17.61■□□□□ 0.41
TNFRSF1A-209ENST00000536717 MLLT3P42568 568 aaPredicted RBP17.61■□□□□ 0.41
TNFRSF1A-209ENST00000536717 CFHR1Q03591 330 aa17.61■□□□□ 0.41
TNFRSF1A-209ENST00000536717 TMEM115Q12893 351 aaPredicted RBP17.61■□□□□ 0.41
TNFRSF1A-209ENST00000536717 PLA2G4EQ3MJ16 856 aa17.61■□□□□ 0.41
TNFRSF1A-209ENST00000536717 NKAIN2Q5VXU1 208 aa17.61■□□□□ 0.41
TNFRSF1A-209ENST00000536717 DENND5AQ6IQ26 1287 aa17.61■□□□□ 0.41
TNFRSF1A-209ENST00000536717 C4orf22Q6V702 233 aa17.61■□□□□ 0.41
TNFRSF1A-209ENST00000536717 PDZD3Q86UT5 571 aa17.61■□□□□ 0.41
TNFRSF1A-209ENST00000536717 LRRTM4Q86VH4 590 aa17.61■□□□□ 0.41
TNFRSF1A-209ENST00000536717 KLHL7Q8IXQ5 586 aa17.61■□□□□ 0.41
TNFRSF1A-209ENST00000536717 SPATA4Q8NEY3 305 aa17.61■□□□□ 0.41
TNFRSF1A-209ENST00000536717 UGT1A7Q9HAW7 530 aa17.61■□□□□ 0.41
TNFRSF1A-209ENST00000536717 UGT1A10Q9HAW8 530 aa17.61■□□□□ 0.41
TNFRSF1A-209ENST00000536717 UGT1A8Q9HAW9 530 aa17.61■□□□□ 0.41
TNFRSF1A-209ENST00000536717 SARS2Q9NP81 518 aaKnown RBP17.61■□□□□ 0.41
TNFRSF1A-209ENST00000536717 PRDM8Q9NQV8 689 aa17.61■□□□□ 0.41
TNFRSF1A-209ENST00000536717 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.61■□□□□ 0.41
TNFRSF1A-209ENST00000536717 PAK5Q9P286 719 aa17.61■□□□□ 0.41
TNFRSF1A-209ENST00000536717 PKP3Q9Y446 797 aa17.61■□□□□ 0.41
TNFRSF1A-209ENST00000536717 SDK2Q58EX2 2172 aa17.6■□□□□ 0.41
TNFRSF1A-209ENST00000536717 KMOO15229 486 aa17.6■□□□□ 0.41
TNFRSF1A-209ENST00000536717 STX7O15400 261 aaKnown RBP17.6■□□□□ 0.41
TNFRSF1A-209ENST00000536717 ZW10O43264 779 aa17.6■□□□□ 0.41
TNFRSF1A-209ENST00000536717 SNX2O60749 519 aa17.6■□□□□ 0.41
TNFRSF1A-209ENST00000536717 HOXB3P14651 431 aaPredicted RBP17.6■□□□□ 0.41
TNFRSF1A-209ENST00000536717 CSF2RBP32927 897 aa17.6■□□□□ 0.41
TNFRSF1A-209ENST00000536717 HHEXQ03014 270 aa17.6■□□□□ 0.41
TNFRSF1A-209ENST00000536717 TLE3Q04726 772 aa17.6■□□□□ 0.41
TNFRSF1A-209ENST00000536717 SQSTM1Q13501 440 aa17.6■□□□□ 0.41
TNFRSF1A-209ENST00000536717 TAF1AQ15573 450 aaPredicted RBP17.6■□□□□ 0.41
TNFRSF1A-209ENST00000536717 CLPPQ16740 277 aaPredicted RBP17.6■□□□□ 0.41
TNFRSF1A-209ENST00000536717 PARP6Q2NL67 630 aa17.6■□□□□ 0.41
TNFRSF1A-209ENST00000536717 KCTD11Q693B1 232 aa17.6■□□□□ 0.41
TNFRSF1A-209ENST00000536717 C11orf96Q7Z7L8 435 aa17.6■□□□□ 0.41
TNFRSF1A-209ENST00000536717 GDAP1Q8TB36 358 aa17.6■□□□□ 0.41
TNFRSF1A-209ENST00000536717 TBL1YQ9BQ87 522 aa17.6■□□□□ 0.41
TNFRSF1A-209ENST00000536717 KCNK4Q9NYG8 393 aa17.6■□□□□ 0.41
TNFRSF1A-209ENST00000536717 PCYOX1Q9UHG3 505 aa17.6■□□□□ 0.41
TNFRSF1A-209ENST00000536717 LOXL2Q9Y4K0 774 aa17.6■□□□□ 0.41
TNFRSF1A-209ENST00000536717 KCTD3Q9Y597 815 aa17.6■□□□□ 0.41
TNFRSF1A-209ENST00000536717 AGRPO00253 132 aa17.59■□□□□ 0.41
TNFRSF1A-209ENST00000536717 METTL18O95568 372 aa17.59■□□□□ 0.41
TNFRSF1A-209ENST00000536717 ETS1P14921 441 aa17.59■□□□□ 0.41
TNFRSF1A-209ENST00000536717 ZNF7P17097 686 aaPredicted RBP17.59■□□□□ 0.41
TNFRSF1A-209ENST00000536717 ITIH1P19827 911 aa17.59■□□□□ 0.41
TNFRSF1A-209ENST00000536717 LPOP22079 712 aaPredicted RBP17.59■□□□□ 0.41
TNFRSF1A-209ENST00000536717 SPARCL1Q14515 664 aa17.59■□□□□ 0.41
TNFRSF1A-209ENST00000536717 C16orf72Q14CZ0 275 aa17.59■□□□□ 0.41
TNFRSF1A-209ENST00000536717 INSCQ1MX18 579 aa17.59■□□□□ 0.41
TNFRSF1A-209ENST00000536717 PHF19Q5T6S3 580 aa17.59■□□□□ 0.41
TNFRSF1A-209ENST00000536717 ZNF572Q7Z3I7 529 aaPredicted RBP17.59■□□□□ 0.41
TNFRSF1A-209ENST00000536717 MNS1Q8NEH6 495 aa17.59■□□□□ 0.41
TNFRSF1A-209ENST00000536717 DDHD1Q8NEL9 900 aa17.59■□□□□ 0.41
TNFRSF1A-209ENST00000536717 OR4K2Q8NGD2 314 aa17.59■□□□□ 0.41
TNFRSF1A-209ENST00000536717 BRSK1Q8TDC3 778 aa17.59■□□□□ 0.41
TNFRSF1A-209ENST00000536717 SLC38A3Q99624 504 aa17.59■□□□□ 0.41
TNFRSF1A-209ENST00000536717 TIMM29Q9BSF4 260 aa17.59■□□□□ 0.41
TNFRSF1A-209ENST00000536717 OSGEPL1Q9H4B0 414 aa17.59■□□□□ 0.41
TNFRSF1A-209ENST00000536717 ARNT2Q9HBZ2 717 aa17.59■□□□□ 0.41
TNFRSF1A-209ENST00000536717 SMOXQ9NWM0 555 aa17.59■□□□□ 0.41
TNFRSF1A-209ENST00000536717 SCHIP1Q9P0W5 487 aaPredicted RBP17.59■□□□□ 0.41
TNFRSF1A-209ENST00000536717 DNAJC16Q9Y2G8 782 aa17.59■□□□□ 0.41
TNFRSF1A-209ENST00000536717 KIR2DS5A0A0G2JLQ3 304 aa17.58■□□□□ 0.41
TNFRSF1A-209ENST00000536717 A0A0G2JNG1 304 aa17.58■□□□□ 0.41
TNFRSF1A-209ENST00000536717 IGHV5-10-1A0A0J9YXX1 117 aa17.58■□□□□ 0.41
TNFRSF1A-209ENST00000536717 OR5K4A6NMS3 321 aa17.58■□□□□ 0.41
TNFRSF1A-209ENST00000536717 KIR2DS3K7RE56 304 aa17.58■□□□□ 0.41
TNFRSF1A-209ENST00000536717 KRT14P02533 472 aa17.58■□□□□ 0.41
TNFRSF1A-209ENST00000536717 SLC2A4P14672 509 aa17.58■□□□□ 0.41
TNFRSF1A-209ENST00000536717 FDFT1P37268 417 aa17.58■□□□□ 0.41
TNFRSF1A-209ENST00000536717 ETV5P41161 510 aa17.58■□□□□ 0.41
TNFRSF1A-209ENST00000536717 LIMK2P53671 638 aa17.58■□□□□ 0.41
TNFRSF1A-209ENST00000536717 GPLD1P80108 840 aa17.58■□□□□ 0.41
TNFRSF1A-209ENST00000536717 ITGA9Q13797 1035 aa17.58■□□□□ 0.41
TNFRSF1A-209ENST00000536717 KIR2DS5Q14953 304 aa17.58■□□□□ 0.41
TNFRSF1A-209ENST00000536717 PPP1R7Q15435 360 aa17.58■□□□□ 0.41
TNFRSF1A-209ENST00000536717 GLIS1Q8NBF1 620 aa17.58■□□□□ 0.41
TNFRSF1A-209ENST00000536717 RCBTB1Q8NDN9 531 aa17.58■□□□□ 0.41
TNFRSF1A-209ENST00000536717 KCNE4Q8WWG9 221 aa17.58■□□□□ 0.41
TNFRSF1A-209ENST00000536717 SLCO2A1Q92959 643 aa17.58■□□□□ 0.41
TNFRSF1A-209ENST00000536717 TMEM159Q96B96 161 aa17.58■□□□□ 0.41
TNFRSF1A-209ENST00000536717 LRRC45Q96CN5 670 aa17.58■□□□□ 0.41
TNFRSF1A-209ENST00000536717 CMKLR1Q99788 373 aa17.58■□□□□ 0.41
TNFRSF1A-209ENST00000536717 TMEM9Q9P0T7 183 aa17.58■□□□□ 0.41
TNFRSF1A-209ENST00000536717 CPNE7Q9UBL6 633 aa17.58■□□□□ 0.41
TNFRSF1A-209ENST00000536717 ATMQ13315 3056 aa17.58■□□□□ 0.4
TNFRSF1A-209ENST00000536717 C2orf81A6NN90 581 aa17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 PRAMEF1O95521 474 aa17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 JMJD7P0C870 316 aa17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 ZSCAN5DPP0CG00 497 aa17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 RPL22P35268 128 aaKnown RBP17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 CTSCP53634 463 aa17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 UBE2IP63279 158 aaKnown RBP17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 DR1Q01658 176 aa17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 C2orf54Q08AI8 447 aa17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 NFATC2Q13469 925 aa17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 LDLRAP1Q5SW96 308 aa17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 GPRC6AQ5T6X5 926 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms