RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 COPS8Q99627 209 aa11.14□□□□□ -0.63
TNFRSF1A-208ENST00000536194 WDR83Q9BRX9 315 aaKnown RBP11.14□□□□□ -0.63
TNFRSF1A-208ENST00000536194 TIMM29Q9BSF4 260 aa11.14□□□□□ -0.63
TNFRSF1A-208ENST00000536194 ZCCHC2Q9C0B9 1178 aaKnown RBP11.14□□□□□ -0.63
TNFRSF1A-208ENST00000536194 PRDM8Q9NQV8 689 aa11.14□□□□□ -0.63
TNFRSF1A-208ENST00000536194 IL1RAPL1Q9NZN1 696 aa11.14□□□□□ -0.63
TNFRSF1A-208ENST00000536194 SCHIP1Q9P0W5 487 aaPredicted RBP11.14□□□□□ -0.63
TNFRSF1A-208ENST00000536194 DNAJC16Q9Y2G8 782 aa11.14□□□□□ -0.63
TNFRSF1A-208ENST00000536194 MRFAP1Q9Y605 127 aa11.14□□□□□ -0.63
TNFRSF1A-208ENST00000536194 PRSS21Q9Y6M0 314 aa11.14□□□□□ -0.63
TNFRSF1A-208ENST00000536194 RNF215Q9Y6U7 377 aa11.14□□□□□ -0.63
TNFRSF1A-208ENST00000536194 SPTBN2O15020 2390 aa11.14□□□□□ -0.63
TNFRSF1A-208ENST00000536194 CACNA1AO00555 2505 aa11.14□□□□□ -0.63
TNFRSF1A-208ENST00000536194 ZCWPW2A0A1B0GU75 182 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 FAM237BA0A1B0GVD1 139 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 FAM187AA6NFU0 413 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 SDR42E2A6NKP2 422 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 EFCAB8A8MWE9 144 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 GOLGA8KD6RF30 607 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 GOLGA8TH3BQL2 631 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 KIF2AO00139 706 aaPredicted RBP11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 OR1I1O60431 355 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 SNX2O60749 519 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 POP7O75817 140 aaKnown RBP11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 VAPBO95292 243 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 GP1BAP07359 652 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 ATP1B2P14415 290 aaPredicted RBP11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 BRAFP15056 766 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 PBLDP30039 288 aaPredicted RBP11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 ARCN1P48444 511 aaKnown RBP11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 RPIAP49247 311 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 PRLHRP49683 370 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 DUSP3P51452 185 aaPredicted RBP11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 INSM1Q01101 510 aaPredicted RBP11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 CKAP4Q07065 602 aaKnown RBP11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 DMPKQ09013 629 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 ILKQ13418 452 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 NFE2L1Q14494 772 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 MORF4L2Q15014 288 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 WHAMMP3Q1A5X7 153 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 ANKRD20A4Q4UJ75 823 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 ZNF658BQ4V348 819 aaPredicted RBP11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 CASC4Q6P4E1 433 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 PACS1Q6VY07 963 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 PCGF5Q86SE9 256 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 TMEM135Q86UB9 458 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 IGDCC3Q8IVU1 814 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 SFRP1Q8N474 314 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 ARL14Q8N4G2 192 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 LILRA3Q8N6C8 439 aaPredicted RBP11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 CLDN19Q8N6F1 224 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 OR6P1Q8NGX9 317 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 SLC37A2Q8TED4 501 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 GLMNQ92990 594 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 CCDC74AQ96AQ1 378 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 DCUN1D1Q96GG9 259 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 SNF8Q96H20 258 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 OSGEPL1Q9H4B0 414 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 PLAC1Q9HBJ0 212 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 NCKIPSDQ9NZQ3 722 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 WDR37Q9Y2I8 494 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 SNX24Q9Y343 169 aa11.13□□□□□ -0.63
TNFRSF1A-208ENST00000536194 TRBV23OR9-2A0A075B6M9 112 aa11.12□□□□□ -0.63
TNFRSF1A-208ENST00000536194 PPM1DO15297 605 aa11.12□□□□□ -0.63
TNFRSF1A-208ENST00000536194 OPA1O60313 960 aa11.12□□□□□ -0.63
TNFRSF1A-208ENST00000536194 TUBB4AP04350 444 aa11.12□□□□□ -0.63
TNFRSF1A-208ENST00000536194 F7P08709 466 aaPredicted RBP11.12□□□□□ -0.63
TNFRSF1A-208ENST00000536194 F3P13726 295 aa11.12□□□□□ -0.63
TNFRSF1A-208ENST00000536194 GLB1P16278 677 aa11.12□□□□□ -0.63
TNFRSF1A-208ENST00000536194 RPL10P27635 214 aaKnown RBP11.12□□□□□ -0.63
TNFRSF1A-208ENST00000536194 DRG2P55039 364 aaKnown RBP11.12□□□□□ -0.63
TNFRSF1A-208ENST00000536194 DHX9Q08211 1270 aaKnown RBP11.12□□□□□ -0.63
TNFRSF1A-208ENST00000536194 ITIH4Q14624 930 aa11.12□□□□□ -0.63
TNFRSF1A-208ENST00000536194 TRADDQ15628 312 aa11.12□□□□□ -0.63
TNFRSF1A-208ENST00000536194 SEPT7Q16181 437 aaKnown RBP11.12□□□□□ -0.63
TNFRSF1A-208ENST00000536194 FASTKD1Q53R41 847 aaKnown RBP11.12□□□□□ -0.63
TNFRSF1A-208ENST00000536194 ARMC3Q5W041 872 aa11.12□□□□□ -0.63
TNFRSF1A-208ENST00000536194 DUPD1Q68J44 220 aa11.12□□□□□ -0.63
TNFRSF1A-208ENST00000536194 KIAA0930Q6ICG6 404 aaPredicted RBP11.12□□□□□ -0.63
TNFRSF1A-208ENST00000536194 IYDQ6PHW0 289 aa11.12□□□□□ -0.63
TNFRSF1A-208ENST00000536194 ZNF438Q7Z4V0 828 aa11.12□□□□□ -0.63
TNFRSF1A-208ENST00000536194 AMZ2Q86W34 360 aa11.12□□□□□ -0.63
TNFRSF1A-208ENST00000536194 HEXDCQ8WVB3 486 aa11.12□□□□□ -0.63
TNFRSF1A-208ENST00000536194 NAT6Q93015 286 aa11.12□□□□□ -0.63
TNFRSF1A-208ENST00000536194 ZNF669Q96BR6 464 aaPredicted RBP11.12□□□□□ -0.63
TNFRSF1A-208ENST00000536194 ZNF514Q96K75 400 aaPredicted RBP11.12□□□□□ -0.63
TNFRSF1A-208ENST00000536194 LINC00615Q96LM1 132 aaPredicted RBP11.12□□□□□ -0.63
TNFRSF1A-208ENST00000536194 CCDC3Q9BQI4 270 aa11.12□□□□□ -0.63
TNFRSF1A-208ENST00000536194 ERP44Q9BS26 406 aa11.12□□□□□ -0.63
TNFRSF1A-208ENST00000536194 SCNM1Q9BWG6 230 aa11.12□□□□□ -0.63
TNFRSF1A-208ENST00000536194 DPH5Q9H2P9 285 aa11.12□□□□□ -0.63
TNFRSF1A-208ENST00000536194 CATSPERZQ9NTU4 200 aa11.12□□□□□ -0.63
TNFRSF1A-208ENST00000536194 GRHL1Q9NZI5 618 aa11.12□□□□□ -0.63
TNFRSF1A-208ENST00000536194 SAMD15Q9P1V8 674 aa11.12□□□□□ -0.63
TNFRSF1A-208ENST00000536194 LRIT1Q9P2V4 623 aa11.12□□□□□ -0.63
TNFRSF1A-208ENST00000536194 KLK13Q9UKR3 277 aa11.12□□□□□ -0.63
TNFRSF1A-208ENST00000536194 DNMT3AQ9Y6K1 912 aaPredicted RBP11.12□□□□□ -0.63
TNFRSF1A-208ENST00000536194 PRAMEF33A0A0G2JMD5 474 aa11.11□□□□□ -0.63
TNFRSF1A-208ENST00000536194 A0A1W2PQM1 296 aa11.11□□□□□ -0.63
TNFRSF1A-208ENST00000536194 FAM149AA5PLN7 773 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms