RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 INSCQ1MX18 579 aa17.6■□□□□ 0.41
DDX55-204ENST00000536079 C14orf28Q4W4Y0 310 aa17.6■□□□□ 0.41
DDX55-204ENST00000536079 AFTPHQ6ULP2 937 aa17.6■□□□□ 0.41
DDX55-204ENST00000536079 IGDCC3Q8IVU1 814 aa17.6■□□□□ 0.41
DDX55-204ENST00000536079 ARL14Q8N4G2 192 aa17.6■□□□□ 0.41
DDX55-204ENST00000536079 LILRA3Q8N6C8 439 aaPredicted RBP17.6■□□□□ 0.41
DDX55-204ENST00000536079 CLDN19Q8N6F1 224 aa17.6■□□□□ 0.41
DDX55-204ENST00000536079 OR4L1Q8NH43 312 aa17.6■□□□□ 0.41
DDX55-204ENST00000536079 CCDC74AQ96AQ1 378 aa17.6■□□□□ 0.41
DDX55-204ENST00000536079 TTC25Q96NG3 672 aa17.6■□□□□ 0.41
DDX55-204ENST00000536079 WDR83Q9BRX9 315 aaKnown RBP17.6■□□□□ 0.41
DDX55-204ENST00000536079 TIMM29Q9BSF4 260 aa17.6■□□□□ 0.41
DDX55-204ENST00000536079 XAB2Q9HCS7 855 aaKnown RBP17.6■□□□□ 0.41
DDX55-204ENST00000536079 MRFAP1Q9Y605 127 aa17.6■□□□□ 0.41
DDX55-204ENST00000536079 NCOR2Q9Y618 2525 aa17.59■□□□□ 0.41
DDX55-204ENST00000536079 PRAMEF33A0A0G2JMD5 474 aa17.59■□□□□ 0.41
DDX55-204ENST00000536079 FAM149AA5PLN7 773 aa17.59■□□□□ 0.41
DDX55-204ENST00000536079 AP3B1O00203 1094 aa17.59■□□□□ 0.41
DDX55-204ENST00000536079 SEC31AO94979 1220 aaKnown RBP17.59■□□□□ 0.41
DDX55-204ENST00000536079 ATP1B2P14415 290 aaPredicted RBP17.59■□□□□ 0.41
DDX55-204ENST00000536079 BRAFP15056 766 aa17.59■□□□□ 0.41
DDX55-204ENST00000536079 CLCNKAP51800 687 aa17.59■□□□□ 0.41
DDX55-204ENST00000536079 INSM1Q01101 510 aaPredicted RBP17.59■□□□□ 0.41
DDX55-204ENST00000536079 DHX9Q08211 1270 aaKnown RBP17.59■□□□□ 0.41
DDX55-204ENST00000536079 NFE2L1Q14494 772 aa17.59■□□□□ 0.41
DDX55-204ENST00000536079 SEPT7Q16181 437 aaKnown RBP17.59■□□□□ 0.41
DDX55-204ENST00000536079 BCL7AQ4VC05 210 aa17.59■□□□□ 0.41
DDX55-204ENST00000536079 CASC4Q6P4E1 433 aa17.59■□□□□ 0.41
DDX55-204ENST00000536079 IYDQ6PHW0 289 aa17.59■□□□□ 0.41
DDX55-204ENST00000536079 HOOK3Q86VS8 718 aa17.59■□□□□ 0.41
DDX55-204ENST00000536079 SLC37A2Q8TED4 501 aa17.59■□□□□ 0.41
DDX55-204ENST00000536079 PEX13Q92968 403 aa17.59■□□□□ 0.41
DDX55-204ENST00000536079 OSGEPL1Q9H4B0 414 aa17.59■□□□□ 0.41
DDX55-204ENST00000536079 PLAC1Q9HBJ0 212 aa17.59■□□□□ 0.41
DDX55-204ENST00000536079 KLK13Q9UKR3 277 aa17.59■□□□□ 0.41
DDX55-204ENST00000536079 WDR37Q9Y2I8 494 aa17.59■□□□□ 0.41
DDX55-204ENST00000536079 ARHGEF17Q96PE2 2063 aaPredicted RBP17.59■□□□□ 0.41
DDX55-204ENST00000536079 GOLGA4Q13439 2230 aaKnown RBP17.58■□□□□ 0.4
DDX55-204ENST00000536079 ASXL3Q9C0F0 2248 aa17.58■□□□□ 0.4
DDX55-204ENST00000536079 ZCWPW2A0A1B0GU75 182 aa17.58■□□□□ 0.4
DDX55-204ENST00000536079 FAM187AA6NFU0 413 aa17.58■□□□□ 0.4
DDX55-204ENST00000536079 EFCAB8A8MWE9 144 aa17.58■□□□□ 0.4
DDX55-204ENST00000536079 PPM1DO15297 605 aa17.58■□□□□ 0.4
DDX55-204ENST00000536079 VAPBO95292 243 aa17.58■□□□□ 0.4
DDX55-204ENST00000536079 RPL10P27635 214 aaKnown RBP17.58■□□□□ 0.4
DDX55-204ENST00000536079 DUSP3P51452 185 aaPredicted RBP17.58■□□□□ 0.4
DDX55-204ENST00000536079 DRG2P55039 364 aaKnown RBP17.58■□□□□ 0.4
DDX55-204ENST00000536079 PRAMEP78395 509 aa17.58■□□□□ 0.4
DDX55-204ENST00000536079 WHAMMP3Q1A5X7 153 aa17.58■□□□□ 0.4
DDX55-204ENST00000536079 ANKRD20A4Q4UJ75 823 aa17.58■□□□□ 0.4
DDX55-204ENST00000536079 ZNF658BQ4V348 819 aaPredicted RBP17.58■□□□□ 0.4
DDX55-204ENST00000536079 HP1BP3Q5SSJ5 553 aaPredicted RBP17.58■□□□□ 0.4
DDX55-204ENST00000536079 PCGF5Q86SE9 256 aa17.58■□□□□ 0.4
DDX55-204ENST00000536079 UNC5BQ8IZJ1 945 aa17.58■□□□□ 0.4
DDX55-204ENST00000536079 GLMNQ92990 594 aa17.58■□□□□ 0.4
DDX55-204ENST00000536079 DCUN1D1Q96GG9 259 aa17.58■□□□□ 0.4
DDX55-204ENST00000536079 SNF8Q96H20 258 aa17.58■□□□□ 0.4
DDX55-204ENST00000536079 SGSM3Q96HU1 749 aa17.58■□□□□ 0.4
DDX55-204ENST00000536079 CCDC3Q9BQI4 270 aa17.58■□□□□ 0.4
DDX55-204ENST00000536079 ZCCHC2Q9C0B9 1178 aaKnown RBP17.58■□□□□ 0.4
DDX55-204ENST00000536079 DPH5Q9H2P9 285 aa17.58■□□□□ 0.4
DDX55-204ENST00000536079 LRIT1Q9P2V4 623 aa17.58■□□□□ 0.4
DDX55-204ENST00000536079 FAM8A1Q9UBU6 413 aa17.58■□□□□ 0.4
DDX55-204ENST00000536079 FAM237BA0A1B0GVD1 139 aa17.57■□□□□ 0.4
DDX55-204ENST00000536079 CD3EAPO15446 510 aaKnown RBP17.57■□□□□ 0.4
DDX55-204ENST00000536079 OPA1O60313 960 aa17.57■□□□□ 0.4
DDX55-204ENST00000536079 RPIAP49247 311 aa17.57■□□□□ 0.4
DDX55-204ENST00000536079 PRLHRP49683 370 aa17.57■□□□□ 0.4
DDX55-204ENST00000536079 CCL7P80098 99 aa17.57■□□□□ 0.4
DDX55-204ENST00000536079 ILKQ13418 452 aa17.57■□□□□ 0.4
DDX55-204ENST00000536079 CLCA4Q14CN2 919 aa17.57■□□□□ 0.4
DDX55-204ENST00000536079 MORF4L2Q15014 288 aa17.57■□□□□ 0.4
DDX55-204ENST00000536079 DUPD1Q68J44 220 aa17.57■□□□□ 0.4
DDX55-204ENST00000536079 TMEM135Q86UB9 458 aa17.57■□□□□ 0.4
DDX55-204ENST00000536079 AMZ2Q86W34 360 aa17.57■□□□□ 0.4
DDX55-204ENST00000536079 ZNF761Q86XN6 746 aaPredicted RBP17.57■□□□□ 0.4
DDX55-204ENST00000536079 SFRP1Q8N474 314 aa17.57■□□□□ 0.4
DDX55-204ENST00000536079 Q8N9G6 341 aaPredicted RBP17.57■□□□□ 0.4
DDX55-204ENST00000536079 ZNF669Q96BR6 464 aaPredicted RBP17.57■□□□□ 0.4
DDX55-204ENST00000536079 ERP44Q9BS26 406 aa17.57■□□□□ 0.4
DDX55-204ENST00000536079 SCNM1Q9BWG6 230 aa17.57■□□□□ 0.4
DDX55-204ENST00000536079 CATSPERZQ9NTU4 200 aa17.57■□□□□ 0.4
DDX55-204ENST00000536079 GRHL1Q9NZI5 618 aa17.57■□□□□ 0.4
DDX55-204ENST00000536079 NCKIPSDQ9NZQ3 722 aa17.57■□□□□ 0.4
DDX55-204ENST00000536079 MAD1L1Q9Y6D9 718 aa17.57■□□□□ 0.4
DDX55-204ENST00000536079 A0A1W2PQM1 296 aa17.56■□□□□ 0.4
DDX55-204ENST00000536079 MGAT4DA6NG13 374 aa17.56■□□□□ 0.4
DDX55-204ENST00000536079 B4GAT1O43505 415 aa17.56■□□□□ 0.4
DDX55-204ENST00000536079 GP1BAP07359 652 aa17.56■□□□□ 0.4
DDX55-204ENST00000536079 F3P13726 295 aa17.56■□□□□ 0.4
DDX55-204ENST00000536079 GLB1P16278 677 aa17.56■□□□□ 0.4
DDX55-204ENST00000536079 OR1D5P58170 312 aa17.56■□□□□ 0.4
DDX55-204ENST00000536079 SLC7A5Q01650 507 aa17.56■□□□□ 0.4
DDX55-204ENST00000536079 DMPKQ09013 629 aa17.56■□□□□ 0.4
DDX55-204ENST00000536079 BBS9Q3SYG4 887 aa17.56■□□□□ 0.4
DDX55-204ENST00000536079 FASTKD1Q53R41 847 aaKnown RBP17.56■□□□□ 0.4
DDX55-204ENST00000536079 HES3Q5TGS1 186 aa17.56■□□□□ 0.4
DDX55-204ENST00000536079 CDCP2Q5VXM1 449 aa17.56■□□□□ 0.4
DDX55-204ENST00000536079 KIAA0930Q6ICG6 404 aaPredicted RBP17.56■□□□□ 0.4
DDX55-204ENST00000536079 PACS1Q6VY07 963 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms