RNA–Protein interactions for RNA: ENST00000535327.5

CCDC7-207, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-207ENST00000535327 CLIC4Q9Y696 253 aa4.48□□□□□ -1.69
CCDC7-207ENST00000535327 CCDC196A0A1B0GTZ2 297 aa4.47□□□□□ -1.69
CCDC7-207ENST00000535327 ANKRD66B4E2M5 251 aa4.47□□□□□ -1.69
CCDC7-207ENST00000535327 DCXO43602 365 aa4.47□□□□□ -1.69
CCDC7-207ENST00000535327 GATA2P23769 480 aaPredicted RBP4.47□□□□□ -1.69
CCDC7-207ENST00000535327 TLE2Q04725 743 aa4.47□□□□□ -1.69
CCDC7-207ENST00000535327 RAB6CQ53S08 254 aa4.47□□□□□ -1.69
CCDC7-207ENST00000535327 PWWP2BQ6NUJ5 590 aa4.47□□□□□ -1.69
CCDC7-207ENST00000535327 PPHLN1Q8NEY8 458 aaKnown RBP4.47□□□□□ -1.69
CCDC7-207ENST00000535327 OR1J2Q8NGS2 313 aa4.47□□□□□ -1.69
CCDC7-207ENST00000535327 RHNO1Q9BSD3 238 aa4.47□□□□□ -1.69
CCDC7-207ENST00000535327 RAB6CQ9H0N0 254 aa4.47□□□□□ -1.69
CCDC7-207ENST00000535327 VEZTQ9HBM0 779 aa4.47□□□□□ -1.69
CCDC7-207ENST00000535327 CCDC177Q9NQR7 707 aaPredicted RBP4.47□□□□□ -1.69
CCDC7-207ENST00000535327 PLCXD1Q9NUJ7 323 aa4.47□□□□□ -1.69
CCDC7-207ENST00000535327 STK39Q9UEW8 545 aa4.47□□□□□ -1.69
CCDC7-207ENST00000535327 CNOT8Q9UFF9 292 aaKnown RBP4.47□□□□□ -1.69
CCDC7-207ENST00000535327 SLC13A4Q9UKG4 626 aa4.47□□□□□ -1.69
CCDC7-207ENST00000535327 CAMK2AQ9UQM7 478 aa4.47□□□□□ -1.69
CCDC7-207ENST00000535327 EXOGQ9Y2C4 368 aaKnown RBP4.47□□□□□ -1.69
CCDC7-207ENST00000535327 COL5A2P05997 1499 aaPredicted RBP4.46□□□□□ -1.7
CCDC7-207ENST00000535327 MOCS3O95396 460 aa4.46□□□□□ -1.7
CCDC7-207ENST00000535327 CLPTM1O96005 669 aa4.46□□□□□ -1.7
CCDC7-207ENST00000535327 PLA2G4BP0C869 781 aa4.46□□□□□ -1.7
CCDC7-207ENST00000535327 ANXA7P20073 488 aaKnown RBP4.46□□□□□ -1.7
CCDC7-207ENST00000535327 EPHA2P29317 976 aa4.46□□□□□ -1.7
CCDC7-207ENST00000535327 CTCFP49711 727 aaPredicted RBP4.46□□□□□ -1.7
CCDC7-207ENST00000535327 VAMP2P63027 116 aa4.46□□□□□ -1.7
CCDC7-207ENST00000535327 SP3Q02447 781 aa4.46□□□□□ -1.7
CCDC7-207ENST00000535327 PTP4A2Q12974 167 aa4.46□□□□□ -1.7
CCDC7-207ENST00000535327 DUOXA1Q1HG43 343 aa4.46□□□□□ -1.7
CCDC7-207ENST00000535327 GTDC1Q4AE62 458 aa4.46□□□□□ -1.7
CCDC7-207ENST00000535327 SLC9C2Q5TAH2 1124 aa4.46□□□□□ -1.7
CCDC7-207ENST00000535327 RASGEF1CQ8N431 466 aa4.46□□□□□ -1.7
CCDC7-207ENST00000535327 RDM1Q8NG50 284 aa4.46□□□□□ -1.7
CCDC7-207ENST00000535327 SAGE1Q9NXZ1 904 aa4.46□□□□□ -1.7
CCDC7-207ENST00000535327 TTC36A6NLP5 189 aa4.45□□□□□ -1.7
CCDC7-207ENST00000535327 EIF4E1BA6NMX2 242 aaKnown RBP4.45□□□□□ -1.7
CCDC7-207ENST00000535327 TRMUO75648 421 aaKnown RBP4.45□□□□□ -1.7
CCDC7-207ENST00000535327 LIFP15018 202 aa4.45□□□□□ -1.7
CCDC7-207ENST00000535327 NKX2-1P43699 371 aaPredicted RBP4.45□□□□□ -1.7
CCDC7-207ENST00000535327 CD81P60033 236 aa4.45□□□□□ -1.7
CCDC7-207ENST00000535327 DCTN2Q13561 401 aaKnown RBP4.45□□□□□ -1.7
CCDC7-207ENST00000535327 NAA35Q5VZE5 725 aa4.45□□□□□ -1.7
CCDC7-207ENST00000535327 FAAP20Q6NZ36 180 aa4.45□□□□□ -1.7
CCDC7-207ENST00000535327 TSSK4Q6SA08 328 aa4.45□□□□□ -1.7
CCDC7-207ENST00000535327 MMS22LQ6ZRQ5 1243 aa4.45□□□□□ -1.7
CCDC7-207ENST00000535327 PM20D2Q8IYS1 436 aa4.45□□□□□ -1.7
CCDC7-207ENST00000535327 HM13Q8TCT9 377 aa4.45□□□□□ -1.7
CCDC7-207ENST00000535327 HVCN1Q96D96 273 aa4.45□□□□□ -1.7
CCDC7-207ENST00000535327 HARBI1Q96MB7 349 aa4.45□□□□□ -1.7
CCDC7-207ENST00000535327 NAP1L4Q99733 375 aaKnown RBP4.45□□□□□ -1.7
CCDC7-207ENST00000535327 SEMA3CQ99985 751 aa4.45□□□□□ -1.7
CCDC7-207ENST00000535327 TBX20Q9UMR3 447 aa4.45□□□□□ -1.7
CCDC7-207ENST00000535327 B3GALT5Q9Y2C3 310 aa4.45□□□□□ -1.7
CCDC7-207ENST00000535327 TEX13DA0A0J9YY54 714 aaPredicted RBP4.44□□□□□ -1.7
CCDC7-207ENST00000535327 ATP2A1O14983 1001 aa4.44□□□□□ -1.7
CCDC7-207ENST00000535327 HOXC11O43248 304 aaPredicted RBP4.44□□□□□ -1.7
CCDC7-207ENST00000535327 ICAM1P05362 532 aa4.44□□□□□ -1.7
CCDC7-207ENST00000535327 PYGLP06737 847 aa4.44□□□□□ -1.7
CCDC7-207ENST00000535327 ITGA3P26006 1051 aa4.44□□□□□ -1.7
CCDC7-207ENST00000535327 WNT5AP41221 380 aa4.44□□□□□ -1.7
CCDC7-207ENST00000535327 MMP15P51511 669 aa4.44□□□□□ -1.7
CCDC7-207ENST00000535327 PPARDQ03181 441 aa4.44□□□□□ -1.7
CCDC7-207ENST00000535327 OLIG2Q13516 323 aa4.44□□□□□ -1.7
CCDC7-207ENST00000535327 PDE1CQ14123 709 aaPredicted RBP4.44□□□□□ -1.7
CCDC7-207ENST00000535327 TCTEX1D4Q5JR98 221 aa4.44□□□□□ -1.7
CCDC7-207ENST00000535327 NDUFAF5Q5TEU4 345 aa4.44□□□□□ -1.7
CCDC7-207ENST00000535327 CCDC70Q6NSX1 233 aa4.44□□□□□ -1.7
CCDC7-207ENST00000535327 ZNF613Q6PF04 617 aa4.44□□□□□ -1.7
CCDC7-207ENST00000535327 SDCCAG8Q86SQ7 713 aaPredicted RBP4.44□□□□□ -1.7
CCDC7-207ENST00000535327 SLC5A8Q8N695 610 aa4.44□□□□□ -1.7
CCDC7-207ENST00000535327 AMER3Q8N944 861 aa4.44□□□□□ -1.7
CCDC7-207ENST00000535327 SEMA4DQ92854 862 aa4.44□□□□□ -1.7
CCDC7-207ENST00000535327 RNF125Q96EQ8 232 aa4.44□□□□□ -1.7
CCDC7-207ENST00000535327 C9orf78Q9NZ63 289 aaPredicted RBP4.44□□□□□ -1.7
CCDC7-207ENST00000535327 PDP2Q9P2J9 529 aa4.44□□□□□ -1.7
CCDC7-207ENST00000535327 PGAP2Q9UHJ9 254 aa4.44□□□□□ -1.7
CCDC7-207ENST00000535327 ZHX2Q9Y6X8 837 aa4.44□□□□□ -1.7
CCDC7-207ENST00000535327 A0A1W2PNU3 283 aaPredicted RBP4.43□□□□□ -1.7
CCDC7-207ENST00000535327 PLPP2O43688 288 aa4.43□□□□□ -1.7
CCDC7-207ENST00000535327 SRSF10O75494 262 aaKnown RBP4.43□□□□□ -1.7
CCDC7-207ENST00000535327 BMP10O95393 424 aa4.43□□□□□ -1.7
CCDC7-207ENST00000535327 EML2O95834 649 aa4.43□□□□□ -1.7
CCDC7-207ENST00000535327 HMBSP08397 361 aa4.43□□□□□ -1.7
CCDC7-207ENST00000535327 TYMPP19971 482 aa4.43□□□□□ -1.7
CCDC7-207ENST00000535327 SLC6A12P48065 614 aa4.43□□□□□ -1.7
CCDC7-207ENST00000535327 F2RL1P55085 397 aa4.43□□□□□ -1.7
CCDC7-207ENST00000535327 ZNF805Q5CZA5 627 aa4.43□□□□□ -1.7
CCDC7-207ENST00000535327 BSPRYQ5W0U4 402 aa4.43□□□□□ -1.7
CCDC7-207ENST00000535327 METTL7BQ6UX53 244 aa4.43□□□□□ -1.7
CCDC7-207ENST00000535327 PTOV1Q86YD1 416 aa4.43□□□□□ -1.7
CCDC7-207ENST00000535327 ZNF614Q8N883 585 aa4.43□□□□□ -1.7
CCDC7-207ENST00000535327 TMEM68Q96MH6 324 aa4.43□□□□□ -1.7
CCDC7-207ENST00000535327 ZNF300Q96RE9 604 aaPredicted RBP4.43□□□□□ -1.7
CCDC7-207ENST00000535327 PRKRIP1Q9H875 184 aaPredicted RBP4.43□□□□□ -1.7
CCDC7-207ENST00000535327 WASH6PQ9NQA3 447 aa4.43□□□□□ -1.7
CCDC7-207ENST00000535327 BUD23O43709 281 aaKnown RBP4.42□□□□□ -1.7
CCDC7-207ENST00000535327 GCNT3O95395 438 aa4.42□□□□□ -1.7
CCDC7-207ENST00000535327 F9P00740 461 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms