RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 SLC23A2Q9UGH3 650 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 TFR2Q9UP52 801 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 TP53TG5Q9Y2B4 290 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 PCDHA13Q9Y5I0 950 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 POLQO75417 2590 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 EFCAB7A8K855 629 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 HACD1B0YJ81 288 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 KMOO15229 486 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 DUX1O43812 170 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 VEGFDO43915 354 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 SEMA7AO75326 666 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 PMPCBO75439 489 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 ZRANB2O95218 330 aaKnown RBP eCLIP9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 TNNT1P13805 278 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 SLC2A4P14672 509 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 NFKB1P19838 968 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 NR1D1P20393 614 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 MPSTP25325 297 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 UGT1A3P35503 534 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 MARCKSL1P49006 195 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 WNT3AP56704 352 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 BIRC2Q13490 618 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 LLGL1Q15334 1064 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 SLC1A5Q15758 541 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 ODF2Q5BJF6 829 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 ALS2CLQ60I27 953 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 KAZNQ674X7 775 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 WASH2PQ6VEQ5 465 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 ZNF567Q8N184 647 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 OR10G6Q8NH81 332 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 KRT35Q92764 455 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 P3H4Q92791 437 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 SH3KBP1Q96B97 665 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 OXNAD1Q96HP4 312 aaPredicted RBP9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 QKIQ96PU8 341 aaKnown RBP eCLIP9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 VAT1Q99536 393 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 GORASP1Q9BQQ3 440 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 TIMM29Q9BSF4 260 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 GPR63Q9BZJ6 419 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 EPB41L1Q9H4G0 881 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 TRABDQ9H4I3 376 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 WASH6PQ9NQA3 447 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 KLC4Q9NSK0 619 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 UBP1Q9NZI7 540 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 OGFRQ9NZT2 677 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 IL17CQ9P0M4 197 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 ZNF624Q9P2J8 865 aaPredicted RBP9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 CPNE7Q9UBL6 633 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 B3GALT1Q9Y5Z6 326 aa9.91□□□□□ -0.82
CLSTN3-203ENST00000534830 RCCD1A6NED2 376 aa9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 LILRA5A6NI73 299 aa9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 BTNL10A8MVZ5 291 aa9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 GAPDHSO14556 408 aaPredicted RBP9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 CAPN5O15484 640 aaPredicted RBP9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 MTX2O75431 263 aa9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 C9P02748 559 aa9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 BRAFP15056 766 aa9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 ZNF7P17097 686 aaPredicted RBP9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 CSTF2P33240 577 aaKnown RBP eCLIP9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 CA5AP35218 305 aa9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 SLC19A1P41440 591 aa9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 COPS2P61201 443 aa9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 MC2RQ01718 297 aa9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 CDC20Q12834 499 aa9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 TMEM115Q12893 351 aaPredicted RBP9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 MPP3Q13368 585 aa9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 MSLNQ13421 630 aaPredicted RBP9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 XRCC4Q13426 336 aa9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 NFATC2Q13469 925 aa9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 NOMO1Q15155 1222 aa9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 ATP13A5Q4VNC0 1218 aa9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 SIRPB2Q5JXA9 342 aa9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 CCDC70Q6NSX1 233 aa9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 ABRAXAS1Q6UWZ7 409 aa9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 BBS12Q6ZW61 710 aa9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 PID1Q7Z2X4 250 aa9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 MAMDC2Q7Z304 686 aaPredicted RBP9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 LRRTM4Q86VH4 590 aa9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 ZC3H18Q86VM9 953 aaKnown RBP9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 PHYKPLQ8IUZ5 450 aa9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 AVL9Q8NBF6 648 aa9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 GALNT11Q8NCW6 608 aa9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 ART4Q93070 314 aa9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 AHCYL2Q96HN2 611 aaKnown RBP9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 SLC45A3Q96JT2 553 aa9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 TBC1D10AQ9BXI6 508 aa9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 TRIM5Q9C035 493 aa9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 GPN2Q9H9Y4 310 aaPredicted RBP9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 BPIFA1Q9NP55 256 aa9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 IL26Q9NPH9 171 aa9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 FBXO8Q9NRD0 319 aa9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 CUEDC1Q9NWM3 386 aaPredicted RBP9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 SLC39A1Q9NY26 324 aa9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 EFR3BQ9Y2G0 817 aa9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 PCDHA3Q9Y5H8 950 aa9.9□□□□□ -0.82
CLSTN3-203ENST00000534830 MN1Q10571 1320 aaPredicted RBP9.89□□□□□ -0.83
CLSTN3-203ENST00000534830 TTLL8A6PVC2 850 aa9.89□□□□□ -0.83
CLSTN3-203ENST00000534830 APOC4-APOC2K7ER74 178 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms