RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 PTPN9P43378 593 aa5.23□□□□□ -1.57
ATM-224ENST00000534625 RECQLP46063 649 aaPredicted RBP5.23□□□□□ -1.57
ATM-224ENST00000534625 DNA2P51530 1060 aa5.23□□□□□ -1.57
ATM-224ENST00000534625 CCNHP51946 323 aaPredicted RBP5.23□□□□□ -1.57
ATM-224ENST00000534625 NEK3P51956 506 aa5.23□□□□□ -1.57
ATM-224ENST00000534625 HDAC4P56524 1084 aa5.23□□□□□ -1.57
ATM-224ENST00000534625 RPS21P63220 83 aaKnown RBP5.23□□□□□ -1.57
ATM-224ENST00000534625 ADAM8P78325 824 aa5.23□□□□□ -1.57
ATM-224ENST00000534625 RIN1Q13671 783 aa5.23□□□□□ -1.57
ATM-224ENST00000534625 ZNF460Q14592 562 aa5.23□□□□□ -1.57
ATM-224ENST00000534625 CDO1Q16878 200 aa5.23□□□□□ -1.57
ATM-224ENST00000534625 RETSATQ6NUM9 610 aa5.23□□□□□ -1.57
ATM-224ENST00000534625 RBM43Q6ZSC3 357 aaKnown RBP5.23□□□□□ -1.57
ATM-224ENST00000534625 Q6ZSR6 202 aa5.23□□□□□ -1.57
ATM-224ENST00000534625 PARS2Q7L3T8 475 aaKnown RBP5.23□□□□□ -1.57
ATM-224ENST00000534625 DRC7Q8IY82 874 aa5.23□□□□□ -1.57
ATM-224ENST00000534625 CCDC185Q8N715 623 aa5.23□□□□□ -1.57
ATM-224ENST00000534625 DCBLD1Q8N8Z6 715 aa5.23□□□□□ -1.57
ATM-224ENST00000534625 MSANTD4Q8NCY6 345 aa5.23□□□□□ -1.57
ATM-224ENST00000534625 OR4C6Q8NH72 309 aa5.23□□□□□ -1.57
ATM-224ENST00000534625 GPT2Q8TD30 523 aa5.23□□□□□ -1.57
ATM-224ENST00000534625 ARHGEF2Q92974 986 aaKnown RBP5.23□□□□□ -1.57
ATM-224ENST00000534625 ISG20Q96AZ6 181 aaKnown RBP5.23□□□□□ -1.57
ATM-224ENST00000534625 PPP1R16AQ96I34 528 aa5.23□□□□□ -1.57
ATM-224ENST00000534625 LRIG1Q96JA1 1093 aa5.23□□□□□ -1.57
ATM-224ENST00000534625 FEM1CQ96JP0 617 aa5.23□□□□□ -1.57
ATM-224ENST00000534625 BBC3Q96PG8 261 aaPredicted RBP5.23□□□□□ -1.57
ATM-224ENST00000534625 KLF6Q99612 283 aaPredicted RBP5.23□□□□□ -1.57
ATM-224ENST00000534625 C11orf70Q9BRQ4 267 aa5.23□□□□□ -1.57
ATM-224ENST00000534625 SLC17A9Q9BYT1 436 aa5.23□□□□□ -1.57
ATM-224ENST00000534625 TM6SF2Q9BZW4 377 aa5.23□□□□□ -1.57
ATM-224ENST00000534625 RETREG1Q9H6L5 497 aa5.23□□□□□ -1.57
ATM-224ENST00000534625 NLRC4Q9NPP4 1024 aa5.23□□□□□ -1.57
ATM-224ENST00000534625 FAM207AQ9NSI2 230 aaPredicted RBP5.23□□□□□ -1.57
ATM-224ENST00000534625 FANCLQ9NW38 375 aa5.23□□□□□ -1.57
ATM-224ENST00000534625 TMEM248Q9NWD8 314 aa5.23□□□□□ -1.57
ATM-224ENST00000534625 DNAI1Q9UI46 699 aa5.23□□□□□ -1.57
ATM-224ENST00000534625 VWA7Q9Y334 891 aa5.23□□□□□ -1.57
ATM-224ENST00000534625 TNPO3Q9Y5L0 923 aaKnown RBP5.23□□□□□ -1.57
ATM-224ENST00000534625 U3KQA8 63 aa5.23□□□□□ -1.57
ATM-224ENST00000534625 ARHGEF17Q96PE2 2063 aaPredicted RBP5.23□□□□□ -1.57
ATM-224ENST00000534625 PIEZO2Q9H5I5 2752 aa5.23□□□□□ -1.57
ATM-224ENST00000534625 SPTA1P02549 2419 aa5.23□□□□□ -1.57
ATM-224ENST00000534625 ATMQ13315 3056 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 ZNF462Q96JM2 2506 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 SPTY2D1-AS1A0A0U1RR47 76 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 TCRBV5S1A1TA0A578 114 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 SIGLEC16A6NMB1 481 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 A6NNZ2 444 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 AREL1O15033 823 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 SCAMP1O15126 338 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 FFAR2O15552 330 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 KDELR3O43731 214 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 OPA1O60313 960 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 NEBLO76041 1014 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 POP4O95707 220 aaKnown RBP5.22□□□□□ -1.57
ATM-224ENST00000534625 GSRP00390 522 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 MT-CO3P00414 261 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 KRT3P12035 628 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 CKMT1AP12532 417 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 MYF5P13349 255 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 SDC4P31431 198 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 RFC1P35251 1148 aaPredicted RBP5.22□□□□□ -1.57
ATM-224ENST00000534625 IGFALSP35858 605 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 STAT1P42224 750 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 COPB1P53618 953 aaKnown RBP5.22□□□□□ -1.57
ATM-224ENST00000534625 GSCP56915 257 aaPredicted RBP5.22□□□□□ -1.57
ATM-224ENST00000534625 HNRNPKP61978 463 aaKnown RBP eCLIP5.22□□□□□ -1.57
ATM-224ENST00000534625 E2F1Q01094 437 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 SEMG2Q02383 582 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 FHL2Q14192 279 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 FZD2Q14332 565 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 POLD3Q15054 466 aaPredicted RBP5.22□□□□□ -1.57
ATM-224ENST00000534625 SYCP1Q15431 976 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 MYLK3Q32MK0 819 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 ARL13BQ3SXY8 428 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 ZNF805Q5CZA5 627 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 ZNF542PQ5EBM4 170 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 TPRG1LQ5T0D9 272 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 ATXN7L2Q5T6C5 722 aaPredicted RBP5.22□□□□□ -1.57
ATM-224ENST00000534625 FNDC7Q5VTL7 733 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 KIAA1161Q6NSJ0 714 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 RWDD4Q6NW29 188 aaKnown RBP5.22□□□□□ -1.57
ATM-224ENST00000534625 WDR59Q6PJI9 974 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 KYAT3Q6YP21 454 aaKnown RBP5.22□□□□□ -1.57
ATM-224ENST00000534625 KDM7AQ6ZMT4 941 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 TRIM72Q6ZMU5 477 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 LEKR1Q6ZMV7 388 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 MON1BQ7L1V2 547 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 STRADAQ7RTN6 431 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 PTAR1Q7Z6K3 402 aaPredicted RBP5.22□□□□□ -1.57
ATM-224ENST00000534625 PHF13Q86YI8 300 aaPredicted RBP5.22□□□□□ -1.57
ATM-224ENST00000534625 PYROXD2Q8N2H3 581 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 OR6K2Q8NGY2 324 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 FAM172AQ8WUF8 416 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 ASB12Q8WXK4 309 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 NTAN1Q96AB6 310 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 NXPE2Q96DL1 559 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 TBC1D31Q96DN5 1066 aa5.22□□□□□ -1.57
ATM-224ENST00000534625 C16orf92Q96LL3 132 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms