RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 C11orf96Q7Z7L8 435 aa15.58■□□□□ 0.08
TSKU-204ENST00000533752 LIN37Q96GY3 246 aaPredicted RBP15.58■□□□□ 0.08
TSKU-204ENST00000533752 CDKN2AIPNLQ96HQ2 116 aa15.58■□□□□ 0.08
TSKU-204ENST00000533752 SLC38A3Q99624 504 aa15.58■□□□□ 0.08
TSKU-204ENST00000533752 NAPGQ99747 312 aaPredicted RBP15.58■□□□□ 0.08
TSKU-204ENST00000533752 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.58■□□□□ 0.08
TSKU-204ENST00000533752 IL22Q9GZX6 179 aa15.58■□□□□ 0.08
TSKU-204ENST00000533752 EPB41L1Q9H4G0 881 aa15.58■□□□□ 0.08
TSKU-204ENST00000533752 VPS37BQ9H9H4 285 aa15.58■□□□□ 0.08
TSKU-204ENST00000533752 ZDHHC3Q9NYG2 299 aa15.58■□□□□ 0.08
TSKU-204ENST00000533752 KCNK4Q9NYG8 393 aa15.58■□□□□ 0.08
TSKU-204ENST00000533752 SLC23A2Q9UGH3 650 aa15.58■□□□□ 0.08
TSKU-204ENST00000533752 TCAF1Q9Y4C2 921 aa15.58■□□□□ 0.08
TSKU-204ENST00000533752 ENTPD2Q9Y5L3 495 aa15.58■□□□□ 0.08
TSKU-204ENST00000533752 ASPMQ8IZT6 3477 aa15.58■□□□□ 0.08
TSKU-204ENST00000533752 ANKRD11Q6UB99 2663 aaPredicted RBP15.58■□□□□ 0.08
TSKU-204ENST00000533752 TRBV5-4A0A0C4DH59 114 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 OR2AG2A6NM03 316 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 PPM1DO15297 605 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 DUX1O43812 170 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 POP7O75817 140 aaKnown RBP15.57■□□□□ 0.08
TSKU-204ENST00000533752 EML2O95834 649 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 KRT14P02533 472 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 ACRV1P26436 265 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 GRIA1P42261 906 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 HALP42357 657 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 MLLT3P42568 568 aaPredicted RBP15.57■□□□□ 0.08
TSKU-204ENST00000533752 MAGEA6P43360 314 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 LSSP48449 732 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 PDX1P52945 283 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 CTSCP53634 463 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 EPHA4P54764 986 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 CYP4F3Q08477 520 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 GPS1Q13098 491 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 CCDC38Q502W7 563 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 FNBP1LQ5T0N5 605 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 TSTD2Q5T7W7 516 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 TTC27Q6P3X3 843 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 ABRAXAS1Q6UWZ7 409 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 PROSER1Q86XN7 944 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 TRIM48Q8IWZ4 208 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 RBM12BQ8IXT5 1001 aaKnown RBP15.57■□□□□ 0.08
TSKU-204ENST00000533752 OR10G6Q8NH81 332 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 MDM1Q8TC05 714 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 TMEM159Q96B96 161 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 ATXN7L3BQ96GX2 97 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 LINC00615Q96LM1 132 aaPredicted RBP15.57■□□□□ 0.08
TSKU-204ENST00000533752 TTC1Q99614 292 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 ZMYND15Q9H091 742 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 POLR1BQ9H9Y6 1135 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 UCK1Q9HA47 277 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 PRDM8Q9NQV8 689 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 POT1Q9NUX5 634 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 BFARQ9NZS9 450 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 CPNE7Q9UBL6 633 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 ZMIZ1Q9ULJ6 1067 aa15.57■□□□□ 0.08
TSKU-204ENST00000533752 MYLKQ15746 1914 aa15.56■□□□□ 0.08
TSKU-204ENST00000533752 IGLV3-16A0A075B6K0 115 aa15.56■□□□□ 0.08
TSKU-204ENST00000533752 IGHV1OR21-1A0A087WYE8 117 aa15.56■□□□□ 0.08
TSKU-204ENST00000533752 CCDC187A0A096LP49 1063 aa15.56■□□□□ 0.08
TSKU-204ENST00000533752 CTAGE9A4FU28 777 aa15.56■□□□□ 0.08
TSKU-204ENST00000533752 LILRA5A6NI73 299 aa15.56■□□□□ 0.08
TSKU-204ENST00000533752 CCL22O00626 93 aa15.56■□□□□ 0.08
TSKU-204ENST00000533752 B4GAT1O43505 415 aa15.56■□□□□ 0.08
TSKU-204ENST00000533752 DXOO77932 396 aaKnown RBP15.56■□□□□ 0.08
TSKU-204ENST00000533752 CAPNS1P04632 268 aa15.56■□□□□ 0.08
TSKU-204ENST00000533752 GSTM1P09488 218 aa15.56■□□□□ 0.08
TSKU-204ENST00000533752 ATP1B2P14415 290 aaPredicted RBP15.56■□□□□ 0.08
TSKU-204ENST00000533752 XRCC1P18887 633 aaPredicted RBP15.56■□□□□ 0.08
TSKU-204ENST00000533752 CA5AP35218 305 aa15.56■□□□□ 0.08
TSKU-204ENST00000533752 PRLHRP49683 370 aa15.56■□□□□ 0.08
TSKU-204ENST00000533752 VPS41P49754 854 aa15.56■□□□□ 0.08
TSKU-204ENST00000533752 OR1D5P58170 312 aa15.56■□□□□ 0.08
TSKU-204ENST00000533752 UBE2IP63279 158 aaKnown RBP15.56■□□□□ 0.08
TSKU-204ENST00000533752 GABREP78334 506 aa15.56■□□□□ 0.08
TSKU-204ENST00000533752 PRAMEP78395 509 aa15.56■□□□□ 0.08
TSKU-204ENST00000533752 GSTM4Q03013 218 aa15.56■□□□□ 0.08
TSKU-204ENST00000533752 ACVR1Q04771 509 aa15.56■□□□□ 0.08
TSKU-204ENST00000533752 SQSTM1Q13501 440 aa15.56■□□□□ 0.08
TSKU-204ENST00000533752 ITIH4Q14624 930 aa15.56■□□□□ 0.08
TSKU-204ENST00000533752 AMZ1Q400G9 498 aa15.56■□□□□ 0.08
TSKU-204ENST00000533752 PCID2Q5JVF3 399 aa15.56■□□□□ 0.08
TSKU-204ENST00000533752 LYPLAL1Q5VWZ2 237 aa15.56■□□□□ 0.08
TSKU-204ENST00000533752 PAPD7Q5XG87 772 aaKnown RBP15.56■□□□□ 0.08
TSKU-204ENST00000533752 IGF2-ASQ6U949 168 aa15.56■□□□□ 0.08
TSKU-204ENST00000533752 DET1Q7L5Y6 550 aa15.56■□□□□ 0.08
TSKU-204ENST00000533752 TAS2R42Q7RTR8 314 aa15.56■□□□□ 0.08
TSKU-204ENST00000533752 PIM3Q86V86 326 aa15.56■□□□□ 0.08
TSKU-204ENST00000533752 SERPINA9Q86WD7 417 aa15.56■□□□□ 0.08
TSKU-204ENST00000533752 BEND7Q8N7W2 519 aaPredicted RBP15.56■□□□□ 0.08
TSKU-204ENST00000533752 WDR36Q8NI36 951 aaKnown RBP15.56■□□□□ 0.08
TSKU-204ENST00000533752 SGF29Q96ES7 293 aa15.56■□□□□ 0.08
TSKU-204ENST00000533752 AHCYL2Q96HN2 611 aaKnown RBP15.56■□□□□ 0.08
TSKU-204ENST00000533752 KCND1Q9NSA2 647 aa15.56■□□□□ 0.08
TSKU-204ENST00000533752 PCDHGA8Q9Y5G5 932 aa15.56■□□□□ 0.08
TSKU-204ENST00000533752 COL27A1Q8IZC6 1860 aaPredicted RBP15.56■□□□□ 0.08
TSKU-204ENST00000533752 FREM2Q5SZK8 3169 aa15.56■□□□□ 0.08
TSKU-204ENST00000533752 TRBV23OR9-2A0A075B6M9 112 aa15.55■□□□□ 0.08
TSKU-204ENST00000533752 CCDC78A2IDD5 438 aa15.55■□□□□ 0.08
TSKU-204ENST00000533752 MGAT4DA6NG13 374 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms