RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 TIAL1Q01085 375 aaKnown RBP eCLIP18.29■□□□□ 0.52
SMPD1-208ENST00000533123 CYP2U1Q7Z449 544 aa18.29■□□□□ 0.52
SMPD1-208ENST00000533123 TBC1D1Q86TI0 1168 aaPredicted RBP18.29■□□□□ 0.52
SMPD1-208ENST00000533123 FITM2Q8N6M3 262 aa18.29■□□□□ 0.52
SMPD1-208ENST00000533123 FRMD1Q8N878 549 aa18.29■□□□□ 0.52
SMPD1-208ENST00000533123 RLN3Q8WXF3 142 aa18.29■□□□□ 0.52
SMPD1-208ENST00000533123 MOCOSQ96EN8 888 aa18.29■□□□□ 0.52
SMPD1-208ENST00000533123 ACSS2Q9NR19 701 aa18.29■□□□□ 0.52
SMPD1-208ENST00000533123 RAD18Q9NS91 495 aa18.29■□□□□ 0.52
SMPD1-208ENST00000533123 CRLS1Q9UJA2 301 aa18.29■□□□□ 0.52
SMPD1-208ENST00000533123 UBA6A0AVT1 1052 aaPredicted RBP18.28■□□□□ 0.52
SMPD1-208ENST00000533123 K7ESM1 405 aa18.28■□□□□ 0.52
SMPD1-208ENST00000533123 APBB3O95704 486 aa18.28■□□□□ 0.52
SMPD1-208ENST00000533123 SERPINE1P05121 402 aa18.28■□□□□ 0.52
SMPD1-208ENST00000533123 MAT2AP31153 395 aaKnown RBP18.28■□□□□ 0.52
SMPD1-208ENST00000533123 ACTN3Q08043 901 aaPredicted RBP18.28■□□□□ 0.52
SMPD1-208ENST00000533123 ZNF284Q2VY69 593 aa18.28■□□□□ 0.52
SMPD1-208ENST00000533123 NAPRTQ6XQN6 538 aa18.28■□□□□ 0.52
SMPD1-208ENST00000533123 SERPINA9Q86WD7 417 aa18.28■□□□□ 0.52
SMPD1-208ENST00000533123 LPGAT1Q92604 370 aa18.28■□□□□ 0.52
SMPD1-208ENST00000533123 TSPAN17Q96FV3 270 aa18.28■□□□□ 0.52
SMPD1-208ENST00000533123 CDH19Q9H159 772 aa18.28■□□□□ 0.52
SMPD1-208ENST00000533123 KCNK13Q9HB14 408 aa18.28■□□□□ 0.52
SMPD1-208ENST00000533123 PREBQ9HCU5 417 aa18.28■□□□□ 0.52
SMPD1-208ENST00000533123 THAP1Q9NVV9 213 aa18.28■□□□□ 0.52
SMPD1-208ENST00000533123 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.28■□□□□ 0.52
SMPD1-208ENST00000533123 USH1CQ9Y6N9 552 aa18.28■□□□□ 0.52
SMPD1-208ENST00000533123 FADS2P1A8MWK0 482 aa18.27■□□□□ 0.52
SMPD1-208ENST00000533123 OR1I1O60431 355 aa18.27■□□□□ 0.52
SMPD1-208ENST00000533123 CCDC166P0CW27 439 aa18.27■□□□□ 0.52
SMPD1-208ENST00000533123 MYL2P10916 166 aa18.27■□□□□ 0.52
SMPD1-208ENST00000533123 FDXRP22570 491 aa18.27■□□□□ 0.52
SMPD1-208ENST00000533123 SLC1A6P48664 564 aa18.27■□□□□ 0.52
SMPD1-208ENST00000533123 PPP2CBP62714 309 aa18.27■□□□□ 0.52
SMPD1-208ENST00000533123 PPP2CAP67775 309 aa18.27■□□□□ 0.52
SMPD1-208ENST00000533123 FGL2Q14314 439 aa18.27■□□□□ 0.52
SMPD1-208ENST00000533123 GPR33Q49SQ1 333 aa18.27■□□□□ 0.52
SMPD1-208ENST00000533123 SETMARQ53H47 684 aaPredicted RBP18.27■□□□□ 0.52
SMPD1-208ENST00000533123 LCA5Q86VQ0 697 aa18.27■□□□□ 0.52
SMPD1-208ENST00000533123 RAVER1Q8IY67 606 aaKnown RBP18.27■□□□□ 0.52
SMPD1-208ENST00000533123 CCDC97Q96F63 343 aaPredicted RBP18.27■□□□□ 0.52
SMPD1-208ENST00000533123 KDM4CQ9H3R0 1056 aa18.27■□□□□ 0.52
SMPD1-208ENST00000533123 NFKBIL1Q9UBC1 381 aaPredicted RBP18.27■□□□□ 0.52
SMPD1-208ENST00000533123 TMPRSS11EQ9UL52 423 aa18.27■□□□□ 0.52
SMPD1-208ENST00000533123 PLXNA2O75051 1894 aa18.27■□□□□ 0.52
SMPD1-208ENST00000533123 AGAP14A8MT82 685 aa18.27■□□□□ 0.52
SMPD1-208ENST00000533123 TARM1B6A8C7 271 aa18.27■□□□□ 0.52
SMPD1-208ENST00000533123 NDUFS3O75489 264 aa18.27■□□□□ 0.52
SMPD1-208ENST00000533123 UBOX5O94941 541 aa18.27■□□□□ 0.52
SMPD1-208ENST00000533123 WISP3O95389 354 aaPredicted RBP18.27■□□□□ 0.52
SMPD1-208ENST00000533123 TGDSO95455 350 aa18.27■□□□□ 0.52
SMPD1-208ENST00000533123 AOC1P19801 751 aa18.27■□□□□ 0.52
SMPD1-208ENST00000533123 FMO4P31512 558 aa18.27■□□□□ 0.52
SMPD1-208ENST00000533123 TTPAP49638 278 aa18.27■□□□□ 0.52
SMPD1-208ENST00000533123 TMEM259Q4ZIN3 620 aa18.27■□□□□ 0.52
SMPD1-208ENST00000533123 AARS2Q5JTZ9 985 aaKnown RBP18.27■□□□□ 0.52
SMPD1-208ENST00000533123 KIAA1161Q6NSJ0 714 aa18.27■□□□□ 0.52
SMPD1-208ENST00000533123 FAM45BPQ6NSW5 357 aa18.27■□□□□ 0.52
SMPD1-208ENST00000533123 ZYG11AQ6WRX3 759 aa18.27■□□□□ 0.52
SMPD1-208ENST00000533123 HORMAD1Q86X24 394 aa18.27■□□□□ 0.52
SMPD1-208ENST00000533123 TRAM1L1Q8N609 369 aa18.27■□□□□ 0.52
SMPD1-208ENST00000533123 FAM160A2Q8N612 972 aaPredicted RBP18.27■□□□□ 0.52
SMPD1-208ENST00000533123 FAM45AQ8TCE6 357 aa18.27■□□□□ 0.52
SMPD1-208ENST00000533123 NAT14Q8WUY8 206 aa18.27■□□□□ 0.52
SMPD1-208ENST00000533123 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.27■□□□□ 0.52
SMPD1-208ENST00000533123 SGF29Q96ES7 293 aa18.27■□□□□ 0.52
SMPD1-208ENST00000533123 ZSCAN5AQ9BUG6 496 aa18.27■□□□□ 0.52
SMPD1-208ENST00000533123 INTS10Q9NVR2 710 aaKnown RBP18.27■□□□□ 0.52
SMPD1-208ENST00000533123 TRBV5-4A0A0C4DH59 114 aa18.26■□□□□ 0.51
SMPD1-208ENST00000533123 TMEM221A6NGB7 291 aa18.26■□□□□ 0.51
SMPD1-208ENST00000533123 M0R296 226 aa18.26■□□□□ 0.51
SMPD1-208ENST00000533123 IGLV3-19P01714 112 aa18.26■□□□□ 0.51
SMPD1-208ENST00000533123 APOA4P06727 396 aa18.26■□□□□ 0.51
SMPD1-208ENST00000533123 SGCGQ13326 291 aa18.26■□□□□ 0.51
SMPD1-208ENST00000533123 NXPE1Q8N323 547 aa18.26■□□□□ 0.51
SMPD1-208ENST00000533123 OR6Y1Q8NGX8 325 aa18.26■□□□□ 0.51
SMPD1-208ENST00000533123 TOE1Q96GM8 510 aaKnown RBP18.26■□□□□ 0.51
SMPD1-208ENST00000533123 TCF12Q99081 682 aa18.26■□□□□ 0.51
SMPD1-208ENST00000533123 SORT1Q99523 831 aa18.26■□□□□ 0.51
SMPD1-208ENST00000533123 PLCD4Q9BRC7 762 aa18.26■□□□□ 0.51
SMPD1-208ENST00000533123 AARSD1Q9BTE6 412 aaKnown RBP18.26■□□□□ 0.51
SMPD1-208ENST00000533123 C1QTNF2Q9BXJ5 285 aa18.26■□□□□ 0.51
SMPD1-208ENST00000533123 TMEM120AQ9BXJ8 343 aa18.26■□□□□ 0.51
SMPD1-208ENST00000533123 SLC17A9Q9BYT1 436 aa18.26■□□□□ 0.51
SMPD1-208ENST00000533123 SGK2Q9HBY8 427 aa18.26■□□□□ 0.51
SMPD1-208ENST00000533123 OXSMQ9NWU1 459 aa18.26■□□□□ 0.51
SMPD1-208ENST00000533123 GON4LQ3T8J9 2241 aa18.26■□□□□ 0.51
SMPD1-208ENST00000533123 SOD1P00441 154 aa18.26■□□□□ 0.51
SMPD1-208ENST00000533123 ACRV1P26436 265 aa18.26■□□□□ 0.51
SMPD1-208ENST00000533123 TSNAXIP1Q2TAA8 658 aa18.26■□□□□ 0.51
SMPD1-208ENST00000533123 RAET1GQ6H3X3 334 aa18.26■□□□□ 0.51
SMPD1-208ENST00000533123 NEK5Q6P3R8 708 aa18.26■□□□□ 0.51
SMPD1-208ENST00000533123 CERS6Q6ZMG9 384 aa18.26■□□□□ 0.51
SMPD1-208ENST00000533123 CRLF3Q8IUI8 442 aa18.26■□□□□ 0.51
SMPD1-208ENST00000533123 CAMKK1Q8N5S9 505 aa18.26■□□□□ 0.51
SMPD1-208ENST00000533123 PLA2G15Q8NCC3 412 aa18.26■□□□□ 0.51
SMPD1-208ENST00000533123 OR2T34Q8NGX1 318 aa18.26■□□□□ 0.51
SMPD1-208ENST00000533123 UBXN10Q96LJ8 280 aa18.26■□□□□ 0.51
SMPD1-208ENST00000533123 BOCQ9BWV1 1114 aa18.26■□□□□ 0.51
SMPD1-208ENST00000533123 SPATA6Q9NWH7 488 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms