RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 PRR19A6NJB7 356 aa16.4■□□□□ 0.22
PKP3-209ENST00000533069 GAPDHSO14556 408 aaPredicted RBP16.4■□□□□ 0.22
PKP3-209ENST00000533069 HGSO14964 777 aaPredicted RBP16.4■□□□□ 0.22
PKP3-209ENST00000533069 PSMD3O43242 534 aa16.4■□□□□ 0.22
PKP3-209ENST00000533069 DUX1O43812 170 aa16.4■□□□□ 0.22
PKP3-209ENST00000533069 STIP1P31948 543 aaKnown RBP16.4■□□□□ 0.22
PKP3-209ENST00000533069 EPHA4P54764 986 aa16.4■□□□□ 0.22
PKP3-209ENST00000533069 TRA2AQ13595 282 aaKnown RBP eCLIP16.4■□□□□ 0.22
PKP3-209ENST00000533069 PLA2G4EQ3MJ16 856 aa16.4■□□□□ 0.22
PKP3-209ENST00000533069 GPRC6AQ5T6X5 926 aa16.4■□□□□ 0.22
PKP3-209ENST00000533069 KCTD11Q693B1 232 aa16.4■□□□□ 0.22
PKP3-209ENST00000533069 DENND5AQ6IQ26 1287 aa16.4■□□□□ 0.22
PKP3-209ENST00000533069 USP53Q70EK8 1073 aa16.4■□□□□ 0.22
PKP3-209ENST00000533069 TMPRSS9Q7Z410 1059 aa16.4■□□□□ 0.22
PKP3-209ENST00000533069 PDZD3Q86UT5 571 aa16.4■□□□□ 0.22
PKP3-209ENST00000533069 TRAPPC5Q8IUR0 188 aa16.4■□□□□ 0.22
PKP3-209ENST00000533069 SPACA3Q8IXA5 215 aa16.4■□□□□ 0.22
PKP3-209ENST00000533069 OR4K2Q8NGD2 314 aa16.4■□□□□ 0.22
PKP3-209ENST00000533069 ZNF398Q8TD17 642 aa16.4■□□□□ 0.22
PKP3-209ENST00000533069 KCNE4Q8WWG9 221 aa16.4■□□□□ 0.22
PKP3-209ENST00000533069 AHCYL2Q96HN2 611 aaKnown RBP16.4■□□□□ 0.22
PKP3-209ENST00000533069 ZNF514Q96K75 400 aaPredicted RBP16.4■□□□□ 0.22
PKP3-209ENST00000533069 CAPZA3Q96KX2 299 aa16.4■□□□□ 0.22
PKP3-209ENST00000533069 ZMYND15Q9H091 742 aa16.4■□□□□ 0.22
PKP3-209ENST00000533069 SEMA6CQ9H3T2 930 aa16.4■□□□□ 0.22
PKP3-209ENST00000533069 EPB41L1Q9H4G0 881 aa16.4■□□□□ 0.22
PKP3-209ENST00000533069 SLC23A2Q9UGH3 650 aa16.4■□□□□ 0.22
PKP3-209ENST00000533069 CELSR3Q9NYQ7 3312 aa16.4■□□□□ 0.22
PKP3-209ENST00000533069 IGHV5-10-1A0A0J9YXX1 117 aa16.39■□□□□ 0.21
PKP3-209ENST00000533069 ZNF185O15231 689 aa16.39■□□□□ 0.21
PKP3-209ENST00000533069 LIASO43766 372 aa16.39■□□□□ 0.21
PKP3-209ENST00000533069 UGT1A9O60656 530 aa16.39■□□□□ 0.21
PKP3-209ENST00000533069 METTL18O95568 372 aa16.39■□□□□ 0.21
PKP3-209ENST00000533069 AP2A1O95782 977 aa16.39■□□□□ 0.21
PKP3-209ENST00000533069 UGT1A6P19224 532 aa16.39■□□□□ 0.21
PKP3-209ENST00000533069 IDSP22304 550 aa16.39■□□□□ 0.21
PKP3-209ENST00000533069 UGT1A1P22309 533 aa16.39■□□□□ 0.21
PKP3-209ENST00000533069 UGT1A4P22310 534 aa16.39■□□□□ 0.21
PKP3-209ENST00000533069 ITPKBP27987 946 aa16.39■□□□□ 0.21
PKP3-209ENST00000533069 UGT1A3P35503 534 aa16.39■□□□□ 0.21
PKP3-209ENST00000533069 HADHAP40939 763 aa16.39■□□□□ 0.21
PKP3-209ENST00000533069 LIMK2P53671 638 aa16.39■□□□□ 0.21
PKP3-209ENST00000533069 UCNP55089 124 aa16.39■□□□□ 0.21
PKP3-209ENST00000533069 GDF10P55107 478 aa16.39■□□□□ 0.21
PKP3-209ENST00000533069 UBE2IP63279 158 aaKnown RBP16.39■□□□□ 0.21
PKP3-209ENST00000533069 TLE3Q04726 772 aa16.39■□□□□ 0.21
PKP3-209ENST00000533069 MSLNQ13421 630 aaPredicted RBP16.39■□□□□ 0.21
PKP3-209ENST00000533069 OLIG2Q13516 323 aa16.39■□□□□ 0.21
PKP3-209ENST00000533069 AGAP9Q5VTM2 703 aa16.39■□□□□ 0.21
PKP3-209ENST00000533069 BROXQ5VW32 411 aa16.39■□□□□ 0.21
PKP3-209ENST00000533069 DRICH1Q6PGQ1 229 aaPredicted RBP16.39■□□□□ 0.21
PKP3-209ENST00000533069 WASH2PQ6VEQ5 465 aa16.39■□□□□ 0.21
PKP3-209ENST00000533069 C11orf96Q7Z7L8 435 aa16.39■□□□□ 0.21
PKP3-209ENST00000533069 ATG4AQ8WYN0 398 aa16.39■□□□□ 0.21
PKP3-209ENST00000533069 UCK1Q9HA47 277 aa16.39■□□□□ 0.21
PKP3-209ENST00000533069 UGT1A7Q9HAW7 530 aa16.39■□□□□ 0.21
PKP3-209ENST00000533069 UGT1A10Q9HAW8 530 aa16.39■□□□□ 0.21
PKP3-209ENST00000533069 UGT1A8Q9HAW9 530 aa16.39■□□□□ 0.21
PKP3-209ENST00000533069 WASH6PQ9NQA3 447 aa16.39■□□□□ 0.21
PKP3-209ENST00000533069 PRDM8Q9NQV8 689 aa16.39■□□□□ 0.21
PKP3-209ENST00000533069 CPNE7Q9UBL6 633 aa16.39■□□□□ 0.21
PKP3-209ENST00000533069 PISDQ9UG56 409 aa16.39■□□□□ 0.21
PKP3-209ENST00000533069 ACSL6Q9UKU0 697 aa16.39■□□□□ 0.21
PKP3-209ENST00000533069 DNAJC16Q9Y2G8 782 aa16.39■□□□□ 0.21
PKP3-209ENST00000533069 DNMT3AQ9Y6K1 912 aaPredicted RBP16.39■□□□□ 0.21
PKP3-209ENST00000533069 LILRA5A6NI73 299 aa16.38■□□□□ 0.21
PKP3-209ENST00000533069 ERI2A8K979 691 aaKnown RBP16.38■□□□□ 0.21
PKP3-209ENST00000533069 PDZK1P1A8MUH7 402 aa16.38■□□□□ 0.21
PKP3-209ENST00000533069 GPR39O43194 453 aa16.38■□□□□ 0.21
PKP3-209ENST00000533069 SRP72O76094 671 aaKnown RBP16.38■□□□□ 0.21
PKP3-209ENST00000533069 SLU7O95391 586 aaKnown RBP16.38■□□□□ 0.21
PKP3-209ENST00000533069 XRCC1P18887 633 aaPredicted RBP16.38■□□□□ 0.21
PKP3-209ENST00000533069 MSH3P20585 1137 aa16.38■□□□□ 0.21
PKP3-209ENST00000533069 CSF2RBP32927 897 aa16.38■□□□□ 0.21
PKP3-209ENST00000533069 ZNF140P52738 457 aaPredicted RBP16.38■□□□□ 0.21
PKP3-209ENST00000533069 DMPKQ09013 629 aa16.38■□□□□ 0.21
PKP3-209ENST00000533069 NFATC2Q13469 925 aa16.38■□□□□ 0.21
PKP3-209ENST00000533069 SPARCL1Q14515 664 aa16.38■□□□□ 0.21
PKP3-209ENST00000533069 C16orf72Q14CZ0 275 aa16.38■□□□□ 0.21
PKP3-209ENST00000533069 OASLQ15646 514 aaKnown RBP16.38■□□□□ 0.21
PKP3-209ENST00000533069 CCNG2Q16589 344 aa16.38■□□□□ 0.21
PKP3-209ENST00000533069 NKAIN2Q5VXU1 208 aa16.38■□□□□ 0.21
PKP3-209ENST00000533069 TMEM71Q6P5X7 295 aa16.38■□□□□ 0.21
PKP3-209ENST00000533069 WDR74Q6RFH5 385 aaPredicted RBP16.38■□□□□ 0.21
PKP3-209ENST00000533069 ABRAXAS1Q6UWZ7 409 aa16.38■□□□□ 0.21
PKP3-209ENST00000533069 ZNF574Q6ZN55 896 aaPredicted RBP16.38■□□□□ 0.21
PKP3-209ENST00000533069 LINC00523Q86TU6 105 aa16.38■□□□□ 0.21
PKP3-209ENST00000533069 RASGEF1AQ8N9B8 481 aa16.38■□□□□ 0.21
PKP3-209ENST00000533069 SPATA4Q8NEY3 305 aa16.38■□□□□ 0.21
PKP3-209ENST00000533069 ULK4Q96C45 1275 aa16.38■□□□□ 0.21
PKP3-209ENST00000533069 CCDC74BQ96LY2 380 aa16.38■□□□□ 0.21
PKP3-209ENST00000533069 B3GNT4Q9C0J1 378 aa16.38■□□□□ 0.21
PKP3-209ENST00000533069 FKBPLQ9UIM3 349 aa16.38■□□□□ 0.21
PKP3-209ENST00000533069 RP1P56715 2156 aa16.38■□□□□ 0.21
PKP3-209ENST00000533069 NBEAQ8NFP9 2946 aa16.38■□□□□ 0.21
PKP3-209ENST00000533069 FAM208BQ5VWN6 2430 aa16.37■□□□□ 0.21
PKP3-209ENST00000533069 BPTFQ12830 3046 aa16.37■□□□□ 0.21
PKP3-209ENST00000533069 KLHL33A6NCF5 533 aa16.37■□□□□ 0.21
PKP3-209ENST00000533069 NVLO15381 856 aaKnown RBP16.37■□□□□ 0.21
PKP3-209ENST00000533069 VIPP01282 170 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms