RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 SLC22A8Q8TCC7 542 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 GRIN3AQ8TCU5 1115 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 NARS2Q96I59 477 aaKnown RBP6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 TMEM134Q9H6X4 195 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 KIAA1257Q9ULG3 409 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 ABCG2Q9UNQ0 655 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 EIF3LQ9Y262 564 aaKnown RBP6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 CORINQ9Y5Q5 1042 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 PTPRJQ12913 1337 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 TIAM2Q8IVF5 1701 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 FAM240BA0A1B0GVZ2 78 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 C7orf72A4D263 438 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 APOC4-APOC2K7ER74 178 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 AGRPO00253 132 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 GPR32O75388 356 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 IFNA7P01567 189 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 APOC2P02655 101 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 CKMP06732 381 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 DHRS4L1P0CG22 281 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 GRIA4P48058 902 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 PPIGQ13427 754 aaKnown RBP eCLIP6.73□□□□□ -1.331e-10■□□□□ 8.9
TGFBR3-209ENST00000532540 TRIP4Q15650 581 aaPredicted RBP6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 RFX4Q33E94 735 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 C9orf50Q5SZB4 431 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 GRTP1Q5TC63 336 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 ZNF598Q86UK7 904 aaKnown RBP6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 NOXA1Q86UR1 476 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 FAM126BQ8IXS8 530 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 SLC38A6Q8IZM9 456 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 ZDHHC14Q8IZN3 488 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 NAT16Q8N8M0 369 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 ANKRD53Q8N9V6 530 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 SNX19Q92543 992 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 PEX13Q92968 403 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 TRIM43Q96BQ3 446 aaPredicted RBP6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 RANBP9Q96S59 729 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 HAPLN2Q9GZV7 340 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 DPEP3Q9H4B8 488 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 ATP13A3Q9H7F0 1226 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 TBC1D30Q9Y2I9 924 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 BOLA1Q9Y3E2 137 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 ADGRA2Q96PE1 1338 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 CCDC78A2IDD5 438 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 A8MX80 341 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 F8VP50 259 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 NCAM2O15394 837 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 RGS10O43665 173 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 UPK1BO75841 260 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 CYP7B1O75881 506 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 ENDOD1O94919 500 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 APOL3O95236 402 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 MT-ND1P03886 318 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 ATXN8OSP0DMR3 200 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 ODC1P11926 461 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 TFEBP19484 476 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 VBP1P61758 197 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 SOX4Q06945 474 aaPredicted RBP6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 GNA13Q14344 377 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 SIX1Q15475 284 aaPredicted RBP6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 PPP1R3AQ16821 1122 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 ESCO2Q56NI9 601 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 ZNF57Q68EA5 555 aaPredicted RBP6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 B3GNT9Q6UX72 402 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 AGMOQ6ZNB7 445 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 BBS12Q6ZW61 710 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 EIF3MQ7L2H7 374 aaKnown RBP6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 PID1Q7Z2X4 250 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 CACTIN-AS1Q8N1I8 211 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 KLHDC9Q8NEP7 349 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 TFAP2CQ92754 450 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 CD101Q93033 1021 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 CIDECQ96AQ7 238 aaPredicted RBP6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 CCDC126Q96EE4 140 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 SLC39A13Q96H72 371 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 TNIP3Q96KP6 325 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 OR52B2Q96RD2 323 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 RBBP8Q99708 897 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 EBNA1BP2Q99848 306 aaKnown RBP6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 DSN1Q9H410 356 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 GPN2Q9H9Y4 310 aaPredicted RBP6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 IMPAD1Q9NX62 359 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 PFDN2Q9UHV9 154 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 ACOT9Q9Y305 439 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 MYH11P35749 1972 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 IGKV6D-21A0A0A0MT36 114 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 PRSS51A0A1B0GVH4 220 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 CCDC154A6NI56 674 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 STBD1O95210 358 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 CD36P16671 472 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 RPL35P42766 123 aaKnown RBP6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 ETV4P43268 484 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 NFE2L1Q14494 772 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 TRIM71Q2Q1W2 868 aaKnown RBP6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 PTPN20Q4JDL3 420 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 PIGGQ5H8A4 983 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 FAM109BQ6ICB4 259 aaPredicted RBP6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 CNSTQ6PJW8 725 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 ARHGAP36Q6ZRI8 547 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 R3HCC1LQ7Z5L2 792 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms