RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 UGT1A5P35504 534 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 MMP12P39900 470 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 MLLT3P42568 568 aaPredicted RBP9.31□□□□□ -0.92
VPS26B-207ENST00000532160 LIG3P49916 1009 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 BLKP51451 505 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 ITGA8P53708 1063 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 SESN2P58004 480 aaPredicted RBP9.31□□□□□ -0.92
VPS26B-207ENST00000532160 SRP54P61011 504 aaKnown RBP9.31□□□□□ -0.92
VPS26B-207ENST00000532160 HLTFQ14527 1009 aaKnown RBP eCLIP9.31□□□□□ -0.92
VPS26B-207ENST00000532160 INPP5AQ14642 412 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 PTPRCAPQ14761 206 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 NFATC4Q14934 902 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 ELOCQ15369 112 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 TGIF1Q15583 401 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 SLC14A2Q15849 920 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 CNGA3Q16281 694 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 CERCAMQ5T4B2 595 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 RNASEH2BQ5TBB1 312 aaKnown RBP9.31□□□□□ -0.92
VPS26B-207ENST00000532160 LRRC66Q68CR7 880 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 ERAP2Q6P179 960 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 C4orf22Q6V702 233 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 LIPIQ6XZB0 460 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 CCDC81Q6ZN84 652 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 USP45Q70EL2 814 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 ZNF534Q76KX8 674 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 DPPA4Q7L190 304 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 RAB11FIP2Q7L804 512 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 LYSMD3Q7Z3D4 306 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 RD3Q7Z3Z2 195 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 HSD11B1LQ7Z5J1 315 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 HOOK3Q86VS8 718 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 FBXO39Q8N4B4 442 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 NAT8LQ8N9F0 302 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 DNAAF3Q8N9W5 541 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 PLA2G15Q8NCC3 412 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 HCAR2Q8TDS4 363 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 IFT81Q8WYA0 676 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 COL26A1Q96A83 441 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 SCRN2Q96FV2 425 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 MED8Q96G25 268 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 PDXPQ96GD0 296 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 ATP6V1G3Q96LB4 118 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 GFM1Q96RP9 751 aaKnown RBP9.31□□□□□ -0.92
VPS26B-207ENST00000532160 MCCC1Q96RQ3 725 aaPredicted RBP9.31□□□□□ -0.92
VPS26B-207ENST00000532160 CCNL2Q96S94 520 aaPredicted RBP9.31□□□□□ -0.92
VPS26B-207ENST00000532160 ERP44Q9BS26 406 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 APOOQ9BUR5 198 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 KLQ9UEF7 1012 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 MTRF1LQ9UGC7 380 aaKnown RBP9.31□□□□□ -0.92
VPS26B-207ENST00000532160 NFU1Q9UMS0 254 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 GPR34Q9UPC5 381 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 PPIL1Q9Y3C6 166 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 ZNF711Q9Y462 761 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 KCTD3Q9Y597 815 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 PTPN13Q12923 2485 aa9.31□□□□□ -0.92
VPS26B-207ENST00000532160 A0A1W2PQ67 120 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 CYSRT1A8MQ03 144 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 EIF3HO15372 352 aaKnown RBP eCLIP9.3□□□□□ -0.92
VPS26B-207ENST00000532160 NOBOXO60393 691 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 BANF1O75531 89 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 SUN1O94901 812 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 RASGRP1O95267 797 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 EPOP01588 193 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 FGF1P05230 155 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 ELFN1P0C7U0 828 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 MYBL2P10244 700 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 CYP2A6P11509 494 aaPredicted RBP9.3□□□□□ -0.92
VPS26B-207ENST00000532160 GM2AP17900 193 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 TPSB2P20231 275 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 CARSP49589 748 aaKnown RBP9.3□□□□□ -0.92
VPS26B-207ENST00000532160 INHBCP55103 352 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 RPL26P61254 145 aaKnown RBP9.3□□□□□ -0.92
VPS26B-207ENST00000532160 CRADDP78560 199 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 CAV1Q03135 178 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 ELP6Q0PNE2 266 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 MSLNQ13421 630 aaPredicted RBP9.3□□□□□ -0.92
VPS26B-207ENST00000532160 SEPT6Q14141 434 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 ARHGEF7Q14155 803 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 POU6F1Q14863 301 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 SLMAPQ14BN4 828 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 ACOX1Q15067 660 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 TPSAB1Q15661 275 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 CCDC38Q502W7 563 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 DUPD1Q68J44 220 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 LVRNQ6Q4G3 990 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 TAX1BP1Q86VP1 789 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 GKN2Q86XP6 184 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 PPIL6Q8IXY8 311 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 NDUFAF2Q8N183 169 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 Q8N9G6 341 aaPredicted RBP9.3□□□□□ -0.92
VPS26B-207ENST00000532160 EXD3Q8N9H8 876 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 CCHCR1Q8TD31 782 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 SCG3Q8WXD2 468 aaKnown RBP9.3□□□□□ -0.92
VPS26B-207ENST00000532160 OR1E3Q8WZA6 343 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 FUBP1Q96AE4 644 aaKnown RBP9.3□□□□□ -0.92
VPS26B-207ENST00000532160 EID2BQ96D98 161 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 SNF8Q96H20 258 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 WDR92Q96MX6 357 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 PPP1R2P1Q96PQ5 205 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 GPR63Q9BZJ6 419 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms