RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 GLRBP48167 497 aa9.06□□□□□ -0.96
NEDD8-206ENST00000531430 ARCN1P48444 511 aaKnown RBP9.06□□□□□ -0.96
NEDD8-206ENST00000531430 CLCNKAP51800 687 aa9.06□□□□□ -0.96
NEDD8-206ENST00000531430 GPR19Q15760 415 aa9.06□□□□□ -0.96
NEDD8-206ENST00000531430 PCSK7Q16549 785 aa9.06□□□□□ -0.96
NEDD8-206ENST00000531430 IFI16Q16666 785 aaKnown RBP9.06□□□□□ -0.96
NEDD8-206ENST00000531430 DNTTIP2Q5QJE6 756 aaKnown RBP9.06□□□□□ -0.96
NEDD8-206ENST00000531430 TMTC4Q5T4D3 741 aa9.06□□□□□ -0.96
NEDD8-206ENST00000531430 HGSNATQ68CP4 663 aa9.06□□□□□ -0.96
NEDD8-206ENST00000531430 CCDC70Q6NSX1 233 aa9.06□□□□□ -0.96
NEDD8-206ENST00000531430 ARMC6Q6NXE6 501 aa9.06□□□□□ -0.96
NEDD8-206ENST00000531430 FBXO38Q6PIJ6 1188 aa9.06□□□□□ -0.96
NEDD8-206ENST00000531430 ABRAXAS1Q6UWZ7 409 aa9.06□□□□□ -0.96
NEDD8-206ENST00000531430 PRSS42Q7Z5A4 293 aa9.06□□□□□ -0.96
NEDD8-206ENST00000531430 TRAPPC5Q8IUR0 188 aa9.06□□□□□ -0.96
NEDD8-206ENST00000531430 KCTD6Q8NC69 237 aa9.06□□□□□ -0.96
NEDD8-206ENST00000531430 GPR26Q8NDV2 337 aa9.06□□□□□ -0.96
NEDD8-206ENST00000531430 ARRDC2Q8TBH0 407 aa9.06□□□□□ -0.96
NEDD8-206ENST00000531430 UBXN4Q92575 508 aa9.06□□□□□ -0.96
NEDD8-206ENST00000531430 GLYATL1Q969I3 302 aa9.06□□□□□ -0.96
NEDD8-206ENST00000531430 CLIP3Q96DZ5 547 aa9.06□□□□□ -0.96
NEDD8-206ENST00000531430 TCTN2Q96GX1 697 aa9.06□□□□□ -0.96
NEDD8-206ENST00000531430 ZNF514Q96K75 400 aaPredicted RBP9.06□□□□□ -0.96
NEDD8-206ENST00000531430 ADGRE3Q9BY15 652 aa9.06□□□□□ -0.96
NEDD8-206ENST00000531430 BRD8Q9H0E9 1235 aa9.06□□□□□ -0.96
NEDD8-206ENST00000531430 BPIFA1Q9NP55 256 aa9.06□□□□□ -0.96
NEDD8-206ENST00000531430 KCND1Q9NSA2 647 aa9.06□□□□□ -0.96
NEDD8-206ENST00000531430 POT1Q9NUX5 634 aa9.06□□□□□ -0.96
NEDD8-206ENST00000531430 ASF1BQ9NVP2 202 aa9.06□□□□□ -0.96
NEDD8-206ENST00000531430 HRASLS2Q9NWW9 162 aa9.06□□□□□ -0.96
NEDD8-206ENST00000531430 SOHLH2Q9NX45 425 aa9.06□□□□□ -0.96
NEDD8-206ENST00000531430 LIMA1Q9UHB6 759 aaKnown RBP9.06□□□□□ -0.96
NEDD8-206ENST00000531430 SLC5A6Q9Y289 635 aa9.06□□□□□ -0.96
NEDD8-206ENST00000531430 WDR37Q9Y2I8 494 aa9.06□□□□□ -0.96
NEDD8-206ENST00000531430 PCDHGA9Q9Y5G4 932 aaKnown RBP9.06□□□□□ -0.96
NEDD8-206ENST00000531430 ARHGAP10A1A4S6 786 aa9.05□□□□□ -0.96
NEDD8-206ENST00000531430 LRRC53A6NM62 1247 aa9.05□□□□□ -0.96
NEDD8-206ENST00000531430 MFSD11O43934 449 aa9.05□□□□□ -0.96
NEDD8-206ENST00000531430 SORBS2O94875 1100 aaKnown RBP9.05□□□□□ -0.96
NEDD8-206ENST00000531430 HLA-DQB2P05538 268 aa9.05□□□□□ -0.96
NEDD8-206ENST00000531430 BRAFP15056 766 aa9.05□□□□□ -0.96
NEDD8-206ENST00000531430 CCNCP24863 283 aa9.05□□□□□ -0.96
NEDD8-206ENST00000531430 VARSP26640 1264 aaKnown RBP9.05□□□□□ -0.96
NEDD8-206ENST00000531430 TNFRSF8P28908 595 aa9.05□□□□□ -0.96
NEDD8-206ENST00000531430 PBLDP30039 288 aaPredicted RBP9.05□□□□□ -0.96
NEDD8-206ENST00000531430 OTX2P32243 289 aa9.05□□□□□ -0.96
NEDD8-206ENST00000531430 RPL26P61254 145 aaKnown RBP9.05□□□□□ -0.96
NEDD8-206ENST00000531430 KLHL30Q0D2K2 578 aa9.05□□□□□ -0.96
NEDD8-206ENST00000531430 XRCC4Q13426 336 aa9.05□□□□□ -0.96
NEDD8-206ENST00000531430 PIGHQ14442 188 aaPredicted RBP9.05□□□□□ -0.96
NEDD8-206ENST00000531430 KRT33BQ14525 404 aa9.05□□□□□ -0.96
NEDD8-206ENST00000531430 NAA30Q147X3 362 aaPredicted RBP9.05□□□□□ -0.96
NEDD8-206ENST00000531430 PLEKHN1Q494U1 663 aaPredicted RBP9.05□□□□□ -0.96
NEDD8-206ENST00000531430 ATP13A4Q4VNC1 1196 aa9.05□□□□□ -0.96
NEDD8-206ENST00000531430 PRAMEF17Q5VTA0 474 aa9.05□□□□□ -0.96
NEDD8-206ENST00000531430 SLC6A19Q695T7 634 aa9.05□□□□□ -0.96
NEDD8-206ENST00000531430 KLHL35Q6PF15 583 aa9.05□□□□□ -0.96
NEDD8-206ENST00000531430 ZNF571Q7Z3V5 609 aaPredicted RBP9.05□□□□□ -0.96
NEDD8-206ENST00000531430 BPHLQ86WA6 291 aaPredicted RBP9.05□□□□□ -0.96
NEDD8-206ENST00000531430 LRRC49Q8IUZ0 686 aa9.05□□□□□ -0.96
NEDD8-206ENST00000531430 RBM12BQ8IXT5 1001 aaKnown RBP9.05□□□□□ -0.96
NEDD8-206ENST00000531430 TRAM1L1Q8N609 369 aa9.05□□□□□ -0.96
NEDD8-206ENST00000531430 RBMXL3Q8N7X1 1067 aaKnown RBP9.05□□□□□ -0.96
NEDD8-206ENST00000531430 ENDOVQ8N8Q3 282 aaKnown RBP9.05□□□□□ -0.96
NEDD8-206ENST00000531430 TTC13Q8NBP0 860 aa9.05□□□□□ -0.96
NEDD8-206ENST00000531430 SNRNP40Q96DI7 357 aaKnown RBP9.05□□□□□ -0.96
NEDD8-206ENST00000531430 SGSM3Q96HU1 749 aa9.05□□□□□ -0.96
NEDD8-206ENST00000531430 FCRL4Q96PJ5 515 aa9.05□□□□□ -0.96
NEDD8-206ENST00000531430 ZSCAN5AQ9BUG6 496 aa9.05□□□□□ -0.96
NEDD8-206ENST00000531430 NUDT9Q9BW91 350 aa9.05□□□□□ -0.96
NEDD8-206ENST00000531430 MLXIPLQ9NP71 852 aa9.05□□□□□ -0.96
NEDD8-206ENST00000531430 IMP3Q9NV31 184 aaKnown RBP9.05□□□□□ -0.96
NEDD8-206ENST00000531430 GPR83Q9NYM4 423 aa9.05□□□□□ -0.96
NEDD8-206ENST00000531430 FAM8A1Q9UBU6 413 aa9.05□□□□□ -0.96
NEDD8-206ENST00000531430 RPL26L1Q9UNX3 145 aaKnown RBP9.05□□□□□ -0.96
NEDD8-206ENST00000531430 CFAP20Q9Y6A4 193 aaKnown RBP9.05□□□□□ -0.96
NEDD8-206ENST00000531430 SHANK1Q9Y566 2161 aa9.05□□□□□ -0.96
NEDD8-206ENST00000531430 LRBAP50851 2863 aa9.04□□□□□ -0.96
NEDD8-206ENST00000531430 GOLGA6L3A6NEY3 463 aa9.04□□□□□ -0.96
NEDD8-206ENST00000531430 ANKUB1A6NFN9 424 aa9.04□□□□□ -0.96
NEDD8-206ENST00000531430 KCNK1O00180 336 aa9.04□□□□□ -0.96
NEDD8-206ENST00000531430 DDX3XO00571 662 aaKnown RBP eCLIP9.04□□□□□ -0.961e-12■■□□□ 12.1
NEDD8-206ENST00000531430 VEGFDO43915 354 aa9.04□□□□□ -0.96
NEDD8-206ENST00000531430 CPNE3O75131 537 aaKnown RBP9.04□□□□□ -0.96
NEDD8-206ENST00000531430 POP7O75817 140 aaKnown RBP9.04□□□□□ -0.96
NEDD8-206ENST00000531430 LCA5LO95447 670 aa9.04□□□□□ -0.96
NEDD8-206ENST00000531430 GZMAP12544 262 aa9.04□□□□□ -0.96
NEDD8-206ENST00000531430 FECHP22830 423 aa9.04□□□□□ -0.96
NEDD8-206ENST00000531430 HNRNPH3P31942 346 aaKnown RBP9.04□□□□□ -0.96
NEDD8-206ENST00000531430 HSD11B2P80365 405 aa9.04□□□□□ -0.96
NEDD8-206ENST00000531430 GALNT2Q10471 571 aa9.04□□□□□ -0.96
NEDD8-206ENST00000531430 TMEM115Q12893 351 aaPredicted RBP9.04□□□□□ -0.96
NEDD8-206ENST00000531430 GPS2Q13227 327 aa9.04□□□□□ -0.96
NEDD8-206ENST00000531430 GSE1Q14687 1217 aa9.04□□□□□ -0.96
NEDD8-206ENST00000531430 NFKBIBQ15653 356 aa9.04□□□□□ -0.96
NEDD8-206ENST00000531430 RPE65Q16518 533 aa9.04□□□□□ -0.96
NEDD8-206ENST00000531430 HADHQ16836 314 aaKnown RBP9.04□□□□□ -0.96
NEDD8-206ENST00000531430 MLIPQ5VWP3 458 aa9.04□□□□□ -0.96
NEDD8-206ENST00000531430 LCN10Q6JVE6 187 aa9.04□□□□□ -0.96
NEDD8-206ENST00000531430 SASS6Q6UVJ0 657 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms