RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 TSPY8P0CW00 308 aa4.5□□□□□ -1.69
C11orf88-204ENST00000529661 MYBL1P10243 752 aa4.5□□□□□ -1.69
C11orf88-204ENST00000529661 CCR3P51677 355 aa4.5□□□□□ -1.69
C11orf88-204ENST00000529661 ZNF41P51814 821 aaPredicted RBP4.5□□□□□ -1.69
C11orf88-204ENST00000529661 TSPY1Q01534 308 aa4.5□□□□□ -1.69
C11orf88-204ENST00000529661 MYBPHQ13203 477 aa4.5□□□□□ -1.69
C11orf88-204ENST00000529661 MAD2L1Q13257 205 aaPredicted RBP4.5□□□□□ -1.69
C11orf88-204ENST00000529661 DHX34Q14147 1143 aaKnown RBP4.5□□□□□ -1.69
C11orf88-204ENST00000529661 IL11RAQ14626 422 aa4.5□□□□□ -1.69
C11orf88-204ENST00000529661 SF3B4Q15427 424 aaKnown RBP eCLIP4.5□□□□□ -1.69
C11orf88-204ENST00000529661 KIF19Q2TAC6 998 aa4.5□□□□□ -1.69
C11orf88-204ENST00000529661 MYLK3Q32MK0 819 aa4.5□□□□□ -1.69
C11orf88-204ENST00000529661 AMZ1Q400G9 498 aa4.5□□□□□ -1.69
C11orf88-204ENST00000529661 CBWD6Q4V339 395 aa4.5□□□□□ -1.69
C11orf88-204ENST00000529661 CBWD3Q5JTY5 395 aa4.5□□□□□ -1.69
C11orf88-204ENST00000529661 FAM69BQ5VUD6 431 aa4.5□□□□□ -1.69
C11orf88-204ENST00000529661 DHRS7BQ6IAN0 325 aaPredicted RBP4.5□□□□□ -1.69
C11orf88-204ENST00000529661 KRT80Q6KB66 452 aa4.5□□□□□ -1.69
C11orf88-204ENST00000529661 SLC36A4Q6YBV0 504 aa4.5□□□□□ -1.69
C11orf88-204ENST00000529661 LDB1Q86U70 411 aaPredicted RBP4.5□□□□□ -1.69
C11orf88-204ENST00000529661 PGBD5Q8N414 524 aa4.5□□□□□ -1.69
C11orf88-204ENST00000529661 PCDH20Q8N6Y1 951 aaKnown RBP4.5□□□□□ -1.69
C11orf88-204ENST00000529661 TSPAN14Q8NG11 270 aa4.5□□□□□ -1.69
C11orf88-204ENST00000529661 LILRB1Q8NHL6 650 aaPredicted RBP4.5□□□□□ -1.69
C11orf88-204ENST00000529661 TAS1R2Q8TE23 839 aa4.5□□□□□ -1.69
C11orf88-204ENST00000529661 TAAR8Q969N4 342 aa4.5□□□□□ -1.69
C11orf88-204ENST00000529661 ORAI1Q96D31 301 aa4.5□□□□□ -1.69
C11orf88-204ENST00000529661 RMDN1Q96DB5 314 aa4.5□□□□□ -1.69
C11orf88-204ENST00000529661 ARSGQ96EG1 525 aa4.5□□□□□ -1.69
C11orf88-204ENST00000529661 IGSF21Q96ID5 467 aa4.5□□□□□ -1.69
C11orf88-204ENST00000529661 ADGRG7Q96K78 797 aa4.5□□□□□ -1.69
C11orf88-204ENST00000529661 GFI1Q99684 422 aa4.5□□□□□ -1.69
C11orf88-204ENST00000529661 EDEM3Q9BZQ6 932 aa4.5□□□□□ -1.69
C11orf88-204ENST00000529661 DNAJC18Q9H819 358 aa4.5□□□□□ -1.69
C11orf88-204ENST00000529661 LARSQ9P2J5 1176 aaKnown RBP4.5□□□□□ -1.69
C11orf88-204ENST00000529661 STK39Q9UEW8 545 aa4.5□□□□□ -1.69
C11orf88-204ENST00000529661 TSPYL4Q9UJ04 414 aa4.5□□□□□ -1.69
C11orf88-204ENST00000529661 HACL1Q9UJ83 578 aa4.5□□□□□ -1.69
C11orf88-204ENST00000529661 OSGIN1Q9UJX0 560 aa4.5□□□□□ -1.69
C11orf88-204ENST00000529661 ASTN2O75129 1339 aaPredicted RBP4.49□□□□□ -1.69
C11orf88-204ENST00000529661 A0A0U1RQJ8 604 aa4.49□□□□□ -1.69
C11orf88-204ENST00000529661 hDV102S1A0JD36 115 aa4.49□□□□□ -1.69
C11orf88-204ENST00000529661 GOLGA6L9A6NEM1 432 aa4.49□□□□□ -1.69
C11orf88-204ENST00000529661 URADA6NGE7 173 aa4.49□□□□□ -1.69
C11orf88-204ENST00000529661 EIF4E1BA6NMX2 242 aaKnown RBP4.49□□□□□ -1.69
C11orf88-204ENST00000529661 SRRM3A6NNA2 597 aaPredicted RBP4.49□□□□□ -1.69
C11orf88-204ENST00000529661 FAM90A26D6RGX4 464 aa4.49□□□□□ -1.69
C11orf88-204ENST00000529661 AFPP02771 609 aaKnown RBP4.49□□□□□ -1.69
C11orf88-204ENST00000529661 SCG2P13521 617 aa4.49□□□□□ -1.69
C11orf88-204ENST00000529661 NR2F2P24468 414 aa4.49□□□□□ -1.69
C11orf88-204ENST00000529661 HRH2P25021 359 aa4.49□□□□□ -1.69
C11orf88-204ENST00000529661 PEX5P50542 639 aa4.49□□□□□ -1.69
C11orf88-204ENST00000529661 ERVFC1-1P60608 527 aa4.49□□□□□ -1.69
C11orf88-204ENST00000529661 SIRPAP78324 504 aa4.49□□□□□ -1.69
C11orf88-204ENST00000529661 FOXM1Q08050 763 aa4.49□□□□□ -1.69
C11orf88-204ENST00000529661 TFCP2Q12800 502 aa4.49□□□□□ -1.69
C11orf88-204ENST00000529661 MVPQ14764 893 aaKnown RBP4.49□□□□□ -1.69
C11orf88-204ENST00000529661 SYT16Q17RD7 645 aa4.49□□□□□ -1.69
C11orf88-204ENST00000529661 C18orf63Q68DL7 685 aa4.49□□□□□ -1.69
C11orf88-204ENST00000529661 KCTD18Q6PI47 426 aaPredicted RBP4.49□□□□□ -1.69
C11orf88-204ENST00000529661 RHBDF2Q6PJF5 856 aa4.49□□□□□ -1.69
C11orf88-204ENST00000529661 BRAT1Q6PJG6 821 aa4.49□□□□□ -1.69
C11orf88-204ENST00000529661 INTS8Q75QN2 995 aaKnown RBP4.49□□□□□ -1.69
C11orf88-204ENST00000529661 CHST3Q7LGC8 479 aa4.49□□□□□ -1.69
C11orf88-204ENST00000529661 CCDC186Q7Z3E2 898 aa4.49□□□□□ -1.69
C11orf88-204ENST00000529661 SLFN11Q7Z7L1 901 aa4.49□□□□□ -1.69
C11orf88-204ENST00000529661 OR10S1Q8NGN2 331 aa4.49□□□□□ -1.69
C11orf88-204ENST00000529661 MAGEC3Q8TD91 643 aa4.49□□□□□ -1.69
C11orf88-204ENST00000529661 LPGAT1Q92604 370 aa4.49□□□□□ -1.69
C11orf88-204ENST00000529661 VPS33AQ96AX1 596 aa4.49□□□□□ -1.69
C11orf88-204ENST00000529661 MTBPQ96DY7 904 aa4.49□□□□□ -1.69
C11orf88-204ENST00000529661 CFAP57Q96MR6 1250 aa4.49□□□□□ -1.69
C11orf88-204ENST00000529661 ANKRD2Q9GZV1 360 aa4.49□□□□□ -1.69
C11orf88-204ENST00000529661 PCDH9Q9HC56 1237 aa4.49□□□□□ -1.69
C11orf88-204ENST00000529661 OLAHQ9NV23 265 aa4.49□□□□□ -1.69
C11orf88-204ENST00000529661 ICAM5Q9UMF0 924 aa4.49□□□□□ -1.69
C11orf88-204ENST00000529661 NOL7Q9UMY1 257 aaKnown RBP4.49□□□□□ -1.69
C11orf88-204ENST00000529661 PCDHGA5Q9Y5G8 931 aa4.49□□□□□ -1.69
C11orf88-204ENST00000529661 NFS1Q9Y697 457 aa4.49□□□□□ -1.69
C11orf88-204ENST00000529661 IGLV5-37A0A075B6J1 123 aa4.48□□□□□ -1.69
C11orf88-204ENST00000529661 SLC16A5O15375 505 aa4.48□□□□□ -1.69
C11orf88-204ENST00000529661 NDUFS4O43181 175 aa4.48□□□□□ -1.69
C11orf88-204ENST00000529661 ZNF217O75362 1048 aa4.48□□□□□ -1.69
C11orf88-204ENST00000529661 CREG1O75629 220 aa4.48□□□□□ -1.69
C11orf88-204ENST00000529661 ZWINTO95229 277 aa4.48□□□□□ -1.69
C11orf88-204ENST00000529661 GGPS1O95749 300 aa4.48□□□□□ -1.69
C11orf88-204ENST00000529661 FYNP06241 537 aa4.48□□□□□ -1.69
C11orf88-204ENST00000529661 SRCP12931 536 aa4.48□□□□□ -1.69
C11orf88-204ENST00000529661 DAOP14920 347 aa4.48□□□□□ -1.69
C11orf88-204ENST00000529661 CPT2P23786 658 aa4.48□□□□□ -1.69
C11orf88-204ENST00000529661 SSTR2P30874 369 aa4.48□□□□□ -1.69
C11orf88-204ENST00000529661 SEC61BP60468 96 aaKnown RBP4.48□□□□□ -1.69
C11orf88-204ENST00000529661 PPP2R2BQ00005 443 aa4.48□□□□□ -1.69
C11orf88-204ENST00000529661 SNTA1Q13424 505 aa4.48□□□□□ -1.69
C11orf88-204ENST00000529661 HECTD3Q5T447 861 aa4.48□□□□□ -1.69
C11orf88-204ENST00000529661 CST9LP1Q5W188 147 aa4.48□□□□□ -1.69
C11orf88-204ENST00000529661 PAPD4Q6PIY7 484 aaKnown RBP4.48□□□□□ -1.69
C11orf88-204ENST00000529661 IL27RAQ6UWB1 636 aa4.48□□□□□ -1.69
C11orf88-204ENST00000529661 RBPMS2Q6ZRY4 209 aaKnown RBP4.48□□□□□ -1.69
C11orf88-204ENST00000529661 ATG9AQ7Z3C6 839 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms