RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 WDR24Q96S15 920 aa11.39□□□□□ -0.59
AMBRA1-207ENST00000529553 LYSMD1Q96S90 227 aa11.39□□□□□ -0.59
AMBRA1-207ENST00000529553 TIMM29Q9BSF4 260 aa11.39□□□□□ -0.59
AMBRA1-207ENST00000529553 DHRS4Q9BTZ2 278 aa11.39□□□□□ -0.59
AMBRA1-207ENST00000529553 MLPHQ9BV36 600 aaPredicted RBP11.39□□□□□ -0.59
AMBRA1-207ENST00000529553 OSGEPL1Q9H4B0 414 aa11.39□□□□□ -0.59
AMBRA1-207ENST00000529553 FAM83DQ9H4H8 585 aa11.39□□□□□ -0.59
AMBRA1-207ENST00000529553 AP4E1Q9UPM8 1137 aa11.39□□□□□ -0.59
AMBRA1-207ENST00000529553 MED13LQ71F56 2210 aa11.39□□□□□ -0.59
AMBRA1-207ENST00000529553 FBN3Q75N90 2809 aa11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 DIDO1Q9BTC0 2240 aaKnown RBP11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 TLCD2A6NGC4 264 aa11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 PDZK1P1A8MUH7 402 aa11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 F8VZ95 297 aa11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 BRAFP15056 766 aa11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 UCHL3P15374 230 aa11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 ZNF7P17097 686 aaPredicted RBP11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 CHRNB2P17787 502 aa11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 IDSP22304 550 aa11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 FECHP22830 423 aa11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 CES1P23141 567 aa11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 HTR1EP28566 365 aa11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 CA5AP35218 305 aa11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 TSFMP43897 325 aaKnown RBP11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 MTIF2P46199 727 aaKnown RBP11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 NSFP46459 744 aaKnown RBP11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 ARCN1P48444 511 aaKnown RBP11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 SPINT3P49223 89 aa11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 ADCY2Q08462 1091 aa11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 MAN2A1Q16706 1144 aa11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 VWA2Q5GFL6 755 aa11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 MIIPQ5JXC2 388 aa11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 DCAF10Q5QP82 559 aa11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 ERMARDQ5T6L9 678 aa11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 FJX1Q86VR8 437 aa11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 PHF13Q86YI8 300 aaPredicted RBP11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 PSTKQ8IV42 348 aaKnown RBP11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 PARP9Q8IXQ6 854 aa11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 NPWQ8N729 165 aa11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 GRHL3Q8TE85 626 aa11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 NSMCE1Q8WV22 266 aa11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 MAP3K3Q99759 626 aa11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 WDR77Q9BQA1 342 aaPredicted RBP11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 TRIM8Q9BZR9 551 aa11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 NDST4Q9H3R1 872 aa11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 GDPD2Q9HCC8 539 aa11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 SYTL2Q9HCH5 934 aa11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 SLC23A2Q9UGH3 650 aa11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 PADI2Q9Y2J8 665 aa11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 FHOD1Q9Y613 1164 aa11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 DNHD1Q96M86 4753 aa11.38□□□□□ -0.59
AMBRA1-207ENST00000529553 NIPBLQ6KC79 2804 aaeCLIP11.37□□□□□ -0.59
AMBRA1-207ENST00000529553 TCRBV5S1A1TA0A578 114 aa11.37□□□□□ -0.59
AMBRA1-207ENST00000529553 UBA6A0AVT1 1052 aaPredicted RBP11.37□□□□□ -0.59
AMBRA1-207ENST00000529553 FADS2P1A8MWK0 482 aa11.37□□□□□ -0.59
AMBRA1-207ENST00000529553 PEX12O00623 359 aa11.37□□□□□ -0.59
AMBRA1-207ENST00000529553 MAFKO60675 156 aa11.37□□□□□ -0.59
AMBRA1-207ENST00000529553 KCNJ13O60928 360 aa11.37□□□□□ -0.59
AMBRA1-207ENST00000529553 CLDN7O95471 211 aa11.37□□□□□ -0.59
AMBRA1-207ENST00000529553 ZBTB11O95625 1053 aaPredicted RBP11.37□□□□□ -0.59
AMBRA1-207ENST00000529553 CD63P08962 238 aa11.37□□□□□ -0.59
AMBRA1-207ENST00000529553 EPHB1P54762 984 aa11.37□□□□□ -0.59
AMBRA1-207ENST00000529553 RPL26P61254 145 aaKnown RBP11.37□□□□□ -0.59
AMBRA1-207ENST00000529553 NCF4Q15080 339 aa11.37□□□□□ -0.59
AMBRA1-207ENST00000529553 INSCQ1MX18 579 aa11.37□□□□□ -0.59
AMBRA1-207ENST00000529553 ANO6Q4KMQ2 910 aa11.37□□□□□ -0.59
AMBRA1-207ENST00000529553 MARC1Q5VT66 337 aa11.37□□□□□ -0.59
AMBRA1-207ENST00000529553 B3GNTL1Q67FW5 361 aaPredicted RBP11.37□□□□□ -0.59
AMBRA1-207ENST00000529553 MTFR2Q6P444 385 aa11.37□□□□□ -0.59
AMBRA1-207ENST00000529553 ZNF295-AS1Q8N0V1 137 aa11.37□□□□□ -0.59
AMBRA1-207ENST00000529553 NXPE1Q8N323 547 aa11.37□□□□□ -0.59
AMBRA1-207ENST00000529553 ZNF808Q8N4W9 903 aaPredicted RBP11.37□□□□□ -0.59
AMBRA1-207ENST00000529553 PPP4R1Q8TF05 950 aa11.37□□□□□ -0.59
AMBRA1-207ENST00000529553 SLC20A1Q8WUM9 679 aa11.37□□□□□ -0.59
AMBRA1-207ENST00000529553 ITLN2Q8WWU7 325 aaPredicted RBP11.37□□□□□ -0.59
AMBRA1-207ENST00000529553 CLIP3Q96DZ5 547 aa11.37□□□□□ -0.59
AMBRA1-207ENST00000529553 SLX1AQ9BQ83 275 aa11.37□□□□□ -0.59
AMBRA1-207ENST00000529553 C17orf62Q9BQA9 187 aa11.37□□□□□ -0.59
AMBRA1-207ENST00000529553 OR2AG1Q9H205 316 aa11.37□□□□□ -0.59
AMBRA1-207ENST00000529553 VPS16Q9H269 839 aa11.37□□□□□ -0.59
AMBRA1-207ENST00000529553 DHX35Q9H5Z1 703 aaKnown RBP11.37□□□□□ -0.59
AMBRA1-207ENST00000529553 PKD2L2Q9NZM6 624 aa11.37□□□□□ -0.59
AMBRA1-207ENST00000529553 RPL26L1Q9UNX3 145 aaKnown RBP11.37□□□□□ -0.59
AMBRA1-207ENST00000529553 OR52A4PA6NMU1 304 aa11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 BIN1O00499 593 aa11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 KLF7O75840 302 aaPredicted RBP11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 SLC25A14O95258 325 aaPredicted RBP11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 MSL3P1P0C860 447 aa11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 CD1EP15812 388 aa11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 HOXB4P17483 251 aaPredicted RBP11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 MMP13P45452 471 aa11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 CDH6P55285 790 aa11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 PPP1CAP62136 330 aa11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 RPL7AP62424 266 aaKnown RBP11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 GPR19Q15760 415 aa11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 VWA3BQ502W6 1294 aa11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 TDRD12Q587J7 1177 aaKnown RBP11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 DNTTIP2Q5QJE6 756 aaKnown RBP11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 PDPK2PQ6A1A2 396 aa11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 DNAJC24Q6P3W2 148 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms