RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 ODF2Q5BJF6 829 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 PRRT3Q5FWE3 981 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 FAXCQ5TGI0 409 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 KAZNQ674X7 775 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 LRRC66Q68CR7 880 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 DENND2CQ68D51 928 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 GUSBP11Q6P575 273 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 BBS12Q6ZW61 710 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 USP45Q70EL2 814 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 BZW1Q7L1Q6 419 aaKnown RBP8.4□□□□□ -1.06
SSBP3-212ENST00000528930 RAB11FIP2Q7L804 512 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 NT5DC3Q86UY8 548 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 NLRP8Q86W28 1048 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 HID1Q8IV36 788 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 NDUFAF2Q8N183 169 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 KIAA1524Q8TCG1 905 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 LMX1AQ8TE12 382 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 NUS1Q96E22 293 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 IMP4Q96G21 291 aaKnown RBP8.4□□□□□ -1.06
SSBP3-212ENST00000528930 RBM41Q96IZ5 413 aaKnown RBP8.4□□□□□ -1.06
SSBP3-212ENST00000528930 TEKT5Q96M29 485 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 C5orf34Q96MH7 638 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 WDR92Q96MX6 357 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 AGAP3Q96P47 875 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 TRIB3Q96RU7 358 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 RBM15Q96T37 977 aaKnown RBP eCLIP8.4□□□□□ -1.06
SSBP3-212ENST00000528930 DESI2Q9BSY9 194 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 DUSP23Q9BVJ7 150 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 BOCQ9BWV1 1114 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 TEX101Q9BY14 249 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 SLC25A51Q9H1U9 297 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 ABCG8Q9H221 673 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 HAUS2Q9NVX0 235 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 KCTD5Q9NXV2 234 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 OGFRQ9NZT2 677 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 SPASTQ9UBP0 616 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 TRIM10Q9UDY6 481 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 RPL26L1Q9UNX3 145 aaKnown RBP8.4□□□□□ -1.06
SSBP3-212ENST00000528930 SLC5A6Q9Y289 635 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.4□□□□□ -1.06
SSBP3-212ENST00000528930 DGKBQ9Y6T7 804 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 DCHS2Q6V1P9 2916 aa8.4□□□□□ -1.06
SSBP3-212ENST00000528930 PRAMEF33A0A0G2JMD5 474 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 TCP11X1B4DZS4 312 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 APOC4-APOC2K7ER74 178 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 CACNB4O00305 520 aaPredicted RBP8.39□□□□□ -1.07
SSBP3-212ENST00000528930 TNFRSF10CO14798 259 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 CASC3O15234 703 aaKnown RBP8.39□□□□□ -1.07
SSBP3-212ENST00000528930 PRAMEF10O60809 474 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 RASGRP1O95267 797 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 CLDN7O95471 211 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 MT-CYBP00156 380 aaPredicted RBP8.39□□□□□ -1.07
SSBP3-212ENST00000528930 SOD1P00441 154 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 APOC2P02655 101 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 ALPPL2P10696 532 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 PYGMP11217 842 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 ZNF30P17039 623 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 CD82P27701 267 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 TEAD1P28347 426 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 BLKP51451 505 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 STC1P52823 247 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 EPHB1P54762 984 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 NAP1L1P55209 391 aaKnown RBP8.39□□□□□ -1.07
SSBP3-212ENST00000528930 SLC14A2Q15849 920 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 DEFB133Q30KQ1 61 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 TCTN3Q6NUS6 607 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 ZCCHC8Q6NZY4 707 aaKnown RBP8.39□□□□□ -1.07
SSBP3-212ENST00000528930 AADACL2Q6P093 401 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 CHSY3Q70JA7 882 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 CXXC5Q7LFL8 322 aaKnown RBP8.39□□□□□ -1.07
SSBP3-212ENST00000528930 EFL1Q7Z2Z2 1120 aaKnown RBP8.39□□□□□ -1.07
SSBP3-212ENST00000528930 RD3Q7Z3Z2 195 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 KIAA1328Q86T90 577 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 CCDC50Q8IVM0 306 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 RAVER1Q8IY67 606 aaKnown RBP8.39□□□□□ -1.07
SSBP3-212ENST00000528930 FSTL5Q8N475 847 aaPredicted RBP8.39□□□□□ -1.07
SSBP3-212ENST00000528930 LPCAT1Q8NF37 534 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 OR56A4Q8NGH8 313 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 SPATA22Q8NHS9 363 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 WDR48Q8TAF3 677 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 TFB1MQ8WVM0 346 aaKnown RBP8.39□□□□□ -1.07
SSBP3-212ENST00000528930 OR1E3Q8WZA6 343 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 ALG3Q92685 438 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 P3H4Q92791 437 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 SCAMP4Q969E2 229 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 HAUS1Q96CS2 278 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 EID2BQ96D98 161 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 PDXPQ96GD0 296 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 WDR24Q96S15 920 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 AGAP2Q99490 1192 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 HEMGNQ9BXL5 484 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 SLC13A1Q9BZW2 595 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 ZCCHC2Q9C0B9 1178 aaKnown RBP8.39□□□□□ -1.07
SSBP3-212ENST00000528930 GLOD4Q9HC38 313 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 FGF22Q9HCT0 170 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 MRPL40Q9NQ50 206 aaKnown RBP8.39□□□□□ -1.07
SSBP3-212ENST00000528930 FOXJ2Q9P0K8 574 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 KLQ9UEF7 1012 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 CD84Q9UIB8 345 aa8.39□□□□□ -1.07
SSBP3-212ENST00000528930 EFR3BQ9Y2G0 817 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms