RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 FNTAP49354 379 aa13.17□□□□□ -0.3
CAPN1-215ENST00000528396 INHBCP55103 352 aa13.17□□□□□ -0.3
CAPN1-215ENST00000528396 PRAMEP78395 509 aa13.17□□□□□ -0.3
CAPN1-215ENST00000528396 MSLNQ13421 630 aaPredicted RBP13.17□□□□□ -0.3
CAPN1-215ENST00000528396 CAMK2BQ13554 666 aa13.17□□□□□ -0.3
CAPN1-215ENST00000528396 PPP1R7Q15435 360 aa13.17□□□□□ -0.3
CAPN1-215ENST00000528396 PHF19Q5T6S3 580 aa13.17□□□□□ -0.3
CAPN1-215ENST00000528396 IYDQ6PHW0 289 aa13.17□□□□□ -0.3
CAPN1-215ENST00000528396 ZNF438Q7Z4V0 828 aa13.17□□□□□ -0.3
CAPN1-215ENST00000528396 PIM3Q86V86 326 aa13.17□□□□□ -0.3
CAPN1-215ENST00000528396 SERPINA9Q86WD7 417 aa13.17□□□□□ -0.3
CAPN1-215ENST00000528396 C17orf82Q86X59 251 aaPredicted RBP13.17□□□□□ -0.3
CAPN1-215ENST00000528396 ZNF547Q8IVP9 402 aa13.17□□□□□ -0.3
CAPN1-215ENST00000528396 OR6P1Q8NGX9 317 aa13.17□□□□□ -0.3
CAPN1-215ENST00000528396 OR10G6Q8NH81 332 aa13.17□□□□□ -0.3
CAPN1-215ENST00000528396 CXorf40BQ96DE9 158 aa13.17□□□□□ -0.3
CAPN1-215ENST00000528396 SGF29Q96ES7 293 aa13.17□□□□□ -0.3
CAPN1-215ENST00000528396 ATXN7L3BQ96GX2 97 aa13.17□□□□□ -0.3
CAPN1-215ENST00000528396 CDKN2AIPNLQ96HQ2 116 aa13.17□□□□□ -0.3
CAPN1-215ENST00000528396 TMEM121BQ9BXQ6 578 aaPredicted RBP13.17□□□□□ -0.3
CAPN1-215ENST00000528396 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.17□□□□□ -0.3
CAPN1-215ENST00000528396 SARS2Q9NP81 518 aaKnown RBP13.17□□□□□ -0.3
CAPN1-215ENST00000528396 ZDHHC3Q9NYG2 299 aa13.17□□□□□ -0.3
CAPN1-215ENST00000528396 AKAP7Q9P0M2 348 aaPredicted RBP13.17□□□□□ -0.3
CAPN1-215ENST00000528396 SLC23A2Q9UGH3 650 aa13.17□□□□□ -0.3
CAPN1-215ENST00000528396 ANAPC5Q9UJX4 755 aa13.17□□□□□ -0.3
CAPN1-215ENST00000528396 ATXN7L1Q9ULK2 861 aaPredicted RBP13.17□□□□□ -0.3
CAPN1-215ENST00000528396 DNMT3AQ9Y6K1 912 aaPredicted RBP13.17□□□□□ -0.3
CAPN1-215ENST00000528396 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.17□□□□□ -0.3
CAPN1-215ENST00000528396 BAHCC1Q9P281 2608 aa13.17□□□□□ -0.3
CAPN1-215ENST00000528396 PLXNB3Q9ULL4 1909 aa13.16□□□□□ -0.3
CAPN1-215ENST00000528396 KLHL33A6NCF5 533 aa13.16□□□□□ -0.3
CAPN1-215ENST00000528396 MROH6A6NGR9 719 aa13.16□□□□□ -0.3
CAPN1-215ENST00000528396 H7C0S8 307 aa13.16□□□□□ -0.3
CAPN1-215ENST00000528396 NTN3O00634 580 aaPredicted RBP13.16□□□□□ -0.3
CAPN1-215ENST00000528396 PPM1DO15297 605 aa13.16□□□□□ -0.3
CAPN1-215ENST00000528396 DUX1O43812 170 aa13.16□□□□□ -0.3
CAPN1-215ENST00000528396 CPNE6O95741 557 aa13.16□□□□□ -0.3
CAPN1-215ENST00000528396 MPOP05164 745 aa13.16□□□□□ -0.3
CAPN1-215ENST00000528396 TPSB2P20231 275 aa13.16□□□□□ -0.3
CAPN1-215ENST00000528396 RBMS1P29558 406 aaKnown RBP13.16□□□□□ -0.3
CAPN1-215ENST00000528396 PPARGP37231 505 aaPredicted RBP13.16□□□□□ -0.3
CAPN1-215ENST00000528396 MAPK9P45984 424 aa13.16□□□□□ -0.3
CAPN1-215ENST00000528396 FASLGP48023 281 aa13.16□□□□□ -0.3
CAPN1-215ENST00000528396 NPY2RP49146 381 aa13.16□□□□□ -0.3
CAPN1-215ENST00000528396 CTSCP53634 463 aa13.16□□□□□ -0.3
CAPN1-215ENST00000528396 DRG2P55039 364 aaKnown RBP13.16□□□□□ -0.3
CAPN1-215ENST00000528396 GABREP78334 506 aa13.16□□□□□ -0.3
CAPN1-215ENST00000528396 GPLD1P80108 840 aa13.16□□□□□ -0.3
CAPN1-215ENST00000528396 TPSAB1Q15661 275 aa13.16□□□□□ -0.3
CAPN1-215ENST00000528396 C3orf38Q5JPI3 329 aa13.16□□□□□ -0.3
CAPN1-215ENST00000528396 PCID2Q5JVF3 399 aa13.16□□□□□ -0.3
CAPN1-215ENST00000528396 TTC27Q6P3X3 843 aa13.16□□□□□ -0.3
CAPN1-215ENST00000528396 ZNF449Q6P9G9 518 aa13.16□□□□□ -0.3
CAPN1-215ENST00000528396 AFTPHQ6ULP2 937 aa13.16□□□□□ -0.3
CAPN1-215ENST00000528396 USP53Q70EK8 1073 aa13.16□□□□□ -0.3
CAPN1-215ENST00000528396 LSMEM2Q8N112 164 aa13.16□□□□□ -0.3
CAPN1-215ENST00000528396 OTUD6BQ8N6M0 293 aa13.16□□□□□ -0.3
CAPN1-215ENST00000528396 KDF1Q8NAX2 398 aaPredicted RBP13.16□□□□□ -0.3
CAPN1-215ENST00000528396 RANBP9Q96S59 729 aa13.16□□□□□ -0.3
CAPN1-215ENST00000528396 FOXP3Q9BZS1 431 aa13.16□□□□□ -0.3
CAPN1-215ENST00000528396 IL22Q9GZX6 179 aa13.16□□□□□ -0.3
CAPN1-215ENST00000528396 CPNE7Q9UBL6 633 aa13.16□□□□□ -0.3
CAPN1-215ENST00000528396 TCAF1Q9Y4C2 921 aa13.16□□□□□ -0.3
CAPN1-215ENST00000528396 SAR1BQ9Y6B6 198 aa13.16□□□□□ -0.3
CAPN1-215ENST00000528396 SPEGQ15772 3267 aa13.15□□□□□ -0.3
CAPN1-215ENST00000528396 UNC13CQ8NB66 2214 aa13.15□□□□□ -0.3
CAPN1-215ENST00000528396 ZFC3H1O60293 1989 aaKnown RBP13.15□□□□□ -0.3
CAPN1-215ENST00000528396 CCDC187A0A096LP49 1063 aa13.15□□□□□ -0.3
CAPN1-215ENST00000528396 A0A1W2PQM1 296 aa13.15□□□□□ -0.3
CAPN1-215ENST00000528396 CCDC162PA2VCL2 907 aa13.15□□□□□ -0.3
CAPN1-215ENST00000528396 F8W8V4 182 aa13.15□□□□□ -0.3
CAPN1-215ENST00000528396 SLC35G4P0C7Q5 338 aa13.15□□□□□ -0.3
CAPN1-215ENST00000528396 ATP1B2P14415 290 aaPredicted RBP13.15□□□□□ -0.3
CAPN1-215ENST00000528396 ACRV1P26436 265 aa13.15□□□□□ -0.3
CAPN1-215ENST00000528396 PAFAH1B1P43034 410 aa13.15□□□□□ -0.3
CAPN1-215ENST00000528396 B4GALNT1Q00973 533 aa13.15□□□□□ -0.3
CAPN1-215ENST00000528396 CYP1B1Q16678 543 aa13.15□□□□□ -0.3
CAPN1-215ENST00000528396 CLPPQ16740 277 aaPredicted RBP13.15□□□□□ -0.3
CAPN1-215ENST00000528396 FASTKD1Q53R41 847 aaKnown RBP13.15□□□□□ -0.3
CAPN1-215ENST00000528396 AARS2Q5JTZ9 985 aaKnown RBP13.15□□□□□ -0.3
CAPN1-215ENST00000528396 TSTD2Q5T7W7 516 aa13.15□□□□□ -0.3
CAPN1-215ENST00000528396 AGAP9Q5VTM2 703 aa13.15□□□□□ -0.3
CAPN1-215ENST00000528396 LYPLAL1Q5VWZ2 237 aa13.15□□□□□ -0.3
CAPN1-215ENST00000528396 NKAIN2Q5VXU1 208 aa13.15□□□□□ -0.3
CAPN1-215ENST00000528396 CASC4Q6P4E1 433 aa13.15□□□□□ -0.3
CAPN1-215ENST00000528396 ZNF761Q86XN6 746 aaPredicted RBP13.15□□□□□ -0.3
CAPN1-215ENST00000528396 BEND7Q8N7W2 519 aaPredicted RBP13.15□□□□□ -0.3
CAPN1-215ENST00000528396 WDR36Q8NI36 951 aaKnown RBP13.15□□□□□ -0.3
CAPN1-215ENST00000528396 HDAC10Q969S8 669 aa13.15□□□□□ -0.3
CAPN1-215ENST00000528396 DPYSL5Q9BPU6 564 aa13.15□□□□□ -0.3
CAPN1-215ENST00000528396 POLR1BQ9H9Y6 1135 aa13.15□□□□□ -0.3
CAPN1-215ENST00000528396 RDH14Q9HBH5 336 aa13.15□□□□□ -0.3
CAPN1-215ENST00000528396 SAMD15Q9P1V8 674 aa13.15□□□□□ -0.3
CAPN1-215ENST00000528396 ASIC3Q9UHC3 531 aa13.15□□□□□ -0.3
CAPN1-215ENST00000528396 RIMKLBQ9ULI2 386 aa13.15□□□□□ -0.3
CAPN1-215ENST00000528396 ZMIZ1Q9ULJ6 1067 aa13.15□□□□□ -0.3
CAPN1-215ENST00000528396 SATB2Q9UPW6 733 aa13.15□□□□□ -0.3
CAPN1-215ENST00000528396 ENTPD2Q9Y5L3 495 aa13.15□□□□□ -0.3
CAPN1-215ENST00000528396 MYLKQ15746 1914 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms