RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 MAP3K13O43283 966 aa15.16■□□□□ 0.02
USH1C-207ENST00000527720 SLC22A3O75751 556 aa15.16■□□□□ 0.02
USH1C-207ENST00000527720 ALPIP09923 528 aa15.16■□□□□ 0.02
USH1C-207ENST00000527720 ITGALP20701 1170 aa15.16■□□□□ 0.02
USH1C-207ENST00000527720 SLC6A2P23975 617 aa15.16■□□□□ 0.02
USH1C-207ENST00000527720 ATN1P54259 1190 aaPredicted RBP15.16■□□□□ 0.02
USH1C-207ENST00000527720 ZXDBP98169 803 aa15.16■□□□□ 0.02
USH1C-207ENST00000527720 CREMQ03060 361 aa15.16■□□□□ 0.02
USH1C-207ENST00000527720 TXNDC8Q6A555 127 aa15.16■□□□□ 0.02
USH1C-207ENST00000527720 LCN8Q6JVE9 175 aa15.16■□□□□ 0.02
USH1C-207ENST00000527720 SBSNQ6UWP8 590 aa15.16■□□□□ 0.02
USH1C-207ENST00000527720 CYP2R1Q6VVX0 501 aa15.16■□□□□ 0.02
USH1C-207ENST00000527720 HTR3DQ70Z44 454 aa15.16■□□□□ 0.02
USH1C-207ENST00000527720 CAMK1DQ8IU85 385 aa15.16■□□□□ 0.02
USH1C-207ENST00000527720 LRTOMTQ8WZ04 291 aa15.16■□□□□ 0.02
USH1C-207ENST00000527720 ZNF597Q96LX8 424 aa15.16■□□□□ 0.02
USH1C-207ENST00000527720 RC3H2Q9HBD1 1191 aaKnown RBP15.16■□□□□ 0.02
USH1C-207ENST00000527720 CCM2LQ9NUG4 571 aaPredicted RBP15.16■□□□□ 0.02
USH1C-207ENST00000527720 NDUFA13Q9P0J0 144 aa15.16■□□□□ 0.02
USH1C-207ENST00000527720 ACTR3BQ9P1U1 418 aa15.16■□□□□ 0.02
USH1C-207ENST00000527720 PCDHA9Q9Y5H5 950 aa15.16■□□□□ 0.02
USH1C-207ENST00000527720 GAPDHSO14556 408 aaPredicted RBP15.15■□□□□ 0.02
USH1C-207ENST00000527720 OR4F21O95013 312 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 TNFAIP8O95379 198 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 PABPC4LP0CB38 370 aaKnown RBP15.15■□□□□ 0.02
USH1C-207ENST00000527720 RFC2P35250 354 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 ZFP36L2P47974 494 aaKnown RBP15.15■□□□□ 0.02
USH1C-207ENST00000527720 PTPN5P54829 565 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 NFATC2Q13469 925 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 INPP5AQ14642 412 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 CRY1Q16526 586 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 ATP6AP1LQ52LC2 224 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 MPPE1Q53F39 396 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 APCDD1Q8J025 514 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 CBARPQ8N350 705 aaPredicted RBP15.15■□□□□ 0.02
USH1C-207ENST00000527720 DDI1Q8WTU0 396 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 LRCH3Q96II8 777 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 TM6SF2Q9BZW4 377 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 CIPCQ9C0C6 399 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 EPB41L1Q9H4G0 881 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 ATP13A3Q9H7F0 1226 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 KIAA1522Q9P206 1035 aaPredicted RBP15.15■□□□□ 0.02
USH1C-207ENST00000527720 EVLQ9UI08 416 aaPredicted RBP15.15■□□□□ 0.02
USH1C-207ENST00000527720 LEF1Q9UJU2 399 aaPredicted RBP15.15■□□□□ 0.02
USH1C-207ENST00000527720 CNOT6Q9ULM6 557 aaKnown RBP15.15■□□□□ 0.02
USH1C-207ENST00000527720 TRIM17Q9Y577 477 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 C1orf232A0A0U1RR37 186 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 FAM234BA2RU67 622 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 IQCF5A8MTL0 148 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 K7ERQ8 282 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 IGSF6O95976 241 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 GLUD1P00367 558 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 BMP2P12643 396 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 DGKAP23743 735 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 GRIA3P42263 894 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 SLC7A9P82251 487 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 CREB5Q02930 508 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 TLE2Q04725 743 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 CDKN3Q16667 212 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 GPR33Q49SQ1 333 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 C6orf136Q5SQH8 315 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 METTL2BQ6P1Q9 378 aaKnown RBP15.15■□□□□ 0.02
USH1C-207ENST00000527720 FAM151BQ6UXP7 276 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 CMTR2Q8IYT2 770 aaKnown RBP15.15■□□□□ 0.02
USH1C-207ENST00000527720 MYO1HQ8N1T3 1032 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 GALNT4Q8N4A0 578 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 TMEM199Q8N511 208 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 ANKFN1Q8N957 763 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 OR2T11Q8NH01 316 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 MRPS31Q92665 395 aaKnown RBP15.15■□□□□ 0.02
USH1C-207ENST00000527720 OSBPL11Q9BXB4 747 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 ASB8Q9H765 288 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 ZNF696Q9H7X3 374 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 IL1RL2Q9HB29 575 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 ABCB8Q9NUT2 735 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 CMTM6Q9NX76 183 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 UBAP1Q9NZ09 502 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 SUN2Q9UH99 717 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 PLXNB3Q9ULL4 1909 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 ASB1Q9Y576 335 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 SNX13Q9Y5W8 968 aa15.15■□□□□ 0.02
USH1C-207ENST00000527720 ZFC3H1O60293 1989 aaKnown RBP15.15■□□□□ 0.02
USH1C-207ENST00000527720 A0A0U1RQS6 177 aa15.14■□□□□ 0.01
USH1C-207ENST00000527720 SMIM31A0A1B0GVY4 71 aa15.14■□□□□ 0.01
USH1C-207ENST00000527720 ABHD14A-ACY1A0A1B0GW23 586 aa15.14■□□□□ 0.01
USH1C-207ENST00000527720 FFAR2O15552 330 aa15.14■□□□□ 0.01
USH1C-207ENST00000527720 HNRNPRO43390 633 aaKnown RBP15.14■□□□□ 0.01
USH1C-207ENST00000527720 SMAD6O43541 496 aaKnown RBP15.14■□□□□ 0.01
USH1C-207ENST00000527720 OTCP00480 354 aa15.14■□□□□ 0.01
USH1C-207ENST00000527720 ATP6V1B2P21281 511 aa15.14■□□□□ 0.01
USH1C-207ENST00000527720 ACRV1P26436 265 aa15.14■□□□□ 0.01
USH1C-207ENST00000527720 PEX19P40855 299 aa15.14■□□□□ 0.01
USH1C-207ENST00000527720 POLR2JP52435 117 aaKnown RBP15.14■□□□□ 0.01
USH1C-207ENST00000527720 ERVPABLB-1P60509 514 aa15.14■□□□□ 0.01
USH1C-207ENST00000527720 GTF2H2Q13888 395 aa15.14■□□□□ 0.01
USH1C-207ENST00000527720 NFYCQ13952 458 aa15.14■□□□□ 0.01
USH1C-207ENST00000527720 GRAMD4Q6IC98 578 aa15.14■□□□□ 0.01
USH1C-207ENST00000527720 GTF2H2CQ6P1K8 395 aa15.14■□□□□ 0.01
USH1C-207ENST00000527720 PRR23BQ6ZRT6 265 aa15.14■□□□□ 0.01
USH1C-207ENST00000527720 ERMP1Q7Z2K6 904 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms