RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 GNAO1P09471 354 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 CLEC2LP0C7M8 214 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 SMIM6P0DI80 62 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 SLC2A4P14672 509 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 ALOX12P18054 663 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 FASP25445 335 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 RPL10P27635 214 aaKnown RBP5.76□□□□□ -1.49
CD44-225ENST00000527326 CRHR1P34998 444 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 POLR2IP36954 125 aaKnown RBP5.76□□□□□ -1.49
CD44-225ENST00000527326 CAPZA2P47755 286 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 GABRB2P47870 512 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 SLC1A6P48664 564 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 RAB4BP61018 213 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 YWHAEP62258 255 aaKnown RBP5.76□□□□□ -1.49
CD44-225ENST00000527326 CSNK2BP67870 215 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 ADARB1P78563 741 aaKnown RBP5.76□□□□□ -1.49
CD44-225ENST00000527326 ZNF91Q05481 1191 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 EPS8Q12929 822 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 ABRQ12979 859 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 TRAF3Q13114 568 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 FADDQ13158 208 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 KLF1Q13351 362 aaPredicted RBP5.76□□□□□ -1.49
CD44-225ENST00000527326 ADAM15Q13444 863 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 DMC1Q14565 340 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 INPP5AQ14642 412 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 ZMYND11Q15326 602 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 SEC23AQ15436 765 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 SGCAQ16586 387 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 CA9Q16790 459 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 DUSP6Q16828 381 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 BMT2Q1RMZ1 405 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 BTBD16Q32M84 506 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 IQCCQ4KMZ1 466 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 TEX30Q5JUR7 227 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 CLLU1Q5K131 121 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 CATSPEREQ5SY80 951 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 KRT79Q5XKE5 535 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 SLC6A19Q695T7 634 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 SULT1C3Q6IMI6 304 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 TXNDC11Q6PKC3 985 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 C5orf46Q6UWT4 87 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 GALNT10Q86SR1 603 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 SLC26A11Q86WA9 606 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 MIB1Q86YT6 1006 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 AQP12AQ8IXF9 295 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 PPIL6Q8IXY8 311 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 UBE2J2Q8N2K1 259 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 DPP10Q8N608 796 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 CLRN3Q8NCR9 226 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 GLIS3Q8NEA6 775 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 OR2T34Q8NGX1 318 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 RAET1EQ8TD07 263 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 LRRC15Q8TF66 581 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 SLC22A17Q8WUG5 538 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 ATG4AQ8WYN0 398 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 SLC5A5Q92911 643 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 FATE1Q969F0 183 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 RAB7BQ96AH8 199 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 TRMT2BQ96GJ1 504 aaKnown RBP5.76□□□□□ -1.49
CD44-225ENST00000527326 CENPNQ96H22 339 aaPredicted RBP5.76□□□□□ -1.49
CD44-225ENST00000527326 ELMO2Q96JJ3 720 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 SIGLEC10Q96LC7 697 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 ZSWIM3Q96MP5 696 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 MBOAT7Q96N66 472 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 FRMD6Q96NE9 622 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 TOX2Q96NM4 488 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 ZNF251Q9BRH9 671 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 ISCA1Q9BUE6 129 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 REXO4Q9GZR2 422 aaKnown RBP5.76□□□□□ -1.49
CD44-225ENST00000527326 SLIRPQ9GZT3 109 aaKnown RBP5.76□□□□□ -1.49
CD44-225ENST00000527326 NUAK2Q9H093 628 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 SHARPINQ9H0F6 387 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 LMAN2LQ9H0V9 348 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 C12orf65Q9H3J6 166 aaKnown RBP5.76□□□□□ -1.49
CD44-225ENST00000527326 MROH8Q9H579 483 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 PCDH9Q9HC56 1237 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 RGS18Q9NS28 235 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 PTTG3PQ9NZH4 202 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 TJP2Q9UDY2 1190 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 SLCO3A1Q9UIG8 710 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 FOXD3Q9UJU5 478 aaPredicted RBP5.76□□□□□ -1.49
CD44-225ENST00000527326 OSGIN1Q9UJX0 560 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 ELF5Q9UKW6 265 aaPredicted RBP5.76□□□□□ -1.49
CD44-225ENST00000527326 BAIAP2Q9UQB8 552 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 LIPT1Q9Y234 373 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 INVSQ9Y283 1065 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 TRAPPC4Q9Y296 219 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 TMX2Q9Y320 296 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 MFHAS1Q9Y4C4 1052 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 PCDHGB1Q9Y5G3 927 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 PEX16Q9Y5Y5 336 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 ABCA3Q99758 1704 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 PTPRFP10586 1907 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 LAMB2P55268 1798 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 RIC1Q4ADV7 1423 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 SLIT2O94813 1529 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 TMEM82A0PJX8 343 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 RAB19A4D1S5 217 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 MROH6A6NGR9 719 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 OR6C70A6NIJ9 312 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms