RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 FAM45AQ8TCE6 357 aa18.58■□□□□ 0.56
SMPD1-203ENST00000527275 SCG3Q8WXD2 468 aaKnown RBP18.58■□□□□ 0.56
SMPD1-203ENST00000527275 RIOK2Q9BVS4 552 aaKnown RBP18.58■□□□□ 0.56
SMPD1-203ENST00000527275 UNKQ9C0B0 810 aaKnown RBP18.58■□□□□ 0.56
SMPD1-203ENST00000527275 IGSF5Q9NSI5 407 aa18.58■□□□□ 0.56
SMPD1-203ENST00000527275 XPR1Q9UBH6 696 aa18.58■□□□□ 0.56
SMPD1-203ENST00000527275 TBC1D3DA0A087WVF3 549 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 TBC1D3IA0A087WXS9 549 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 TBC1D3EA0A087X179 549 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 TBC1D3KA0A087X1G2 549 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 TBC1D3FA6NER0 549 aaPredicted RBP18.57■□□□□ 0.56
SMPD1-203ENST00000527275 TMEM114B3SHH9 223 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 TBC1D3LB9A6J9 549 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 ATP5HO75947 161 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 TBC1D3HP0C7X1 549 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 ITGALP20701 1170 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 SKIV2L2P42285 1042 aaKnown RBP18.57■□□□□ 0.56
SMPD1-203ENST00000527275 PXNP49023 591 aaPredicted RBP18.57■□□□□ 0.56
SMPD1-203ENST00000527275 PRKAA2P54646 552 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 DCDC1P59894 354 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 SFSWAPQ12872 951 aaKnown RBP18.57■□□□□ 0.56
SMPD1-203ENST00000527275 ATP13A5Q4VNC0 1218 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 SPDYAQ5MJ70 313 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 HENMT1Q5T8I9 393 aaKnown RBP18.57■□□□□ 0.56
SMPD1-203ENST00000527275 AGAP9Q5VTM2 703 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 LIPMQ5VYY2 423 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 TBC1D3GQ6DHY5 549 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 TBC1D3CQ6IPX1 549 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 TAS2R42Q7RTR8 314 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 CYP2U1Q7Z449 544 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 SNX20Q7Z614 316 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 CLNKQ7Z7G1 428 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 TBC1D3Q8IZP1 549 aaPredicted RBP18.57■□□□□ 0.56
SMPD1-203ENST00000527275 SKA1Q96BD8 255 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 AP2M1Q96CW1 435 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 MRPL57Q9BQC6 102 aaKnown RBP18.57■□□□□ 0.56
SMPD1-203ENST00000527275 SIKE1Q9BRV8 207 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 GATA5Q9BWX5 397 aaPredicted RBP18.57■□□□□ 0.56
SMPD1-203ENST00000527275 SPATA16Q9BXB7 569 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 ABCG8Q9H221 673 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 MRPL46Q9H2W6 279 aaKnown RBP18.57■□□□□ 0.56
SMPD1-203ENST00000527275 TXLNGQ9NUQ3 528 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 USP36Q9P275 1121 aaKnown RBP18.57■□□□□ 0.56
SMPD1-203ENST00000527275 CORO1CQ9ULV4 474 aaPredicted RBP18.57■□□□□ 0.56
SMPD1-203ENST00000527275 ZFR2Q9UPR6 939 aaKnown RBP18.57■□□□□ 0.56
SMPD1-203ENST00000527275 RGSL1A5PLK6 1076 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 TM7SF2O76062 418 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 UNC5CO95185 931 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 CCDC166P0CW27 439 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 TYSND1Q2T9J0 566 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 ZNF549Q6P9A3 640 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 RAVER1Q8IY67 606 aaKnown RBP18.57■□□□□ 0.56
SMPD1-203ENST00000527275 NRSN1Q8IZ57 195 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 TPSD1Q9BZJ3 242 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 BTBD1Q9H0C5 482 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 WWP1Q9H0M0 922 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 CDH19Q9H159 772 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 INTS10Q9NVR2 710 aaKnown RBP18.57■□□□□ 0.56
SMPD1-203ENST00000527275 PNPOQ9NVS9 261 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 DLGAP2Q9P1A6 1054 aa18.57■□□□□ 0.56
SMPD1-203ENST00000527275 AGAP14A8MT82 685 aa18.56■□□□□ 0.56
SMPD1-203ENST00000527275 LTA4HP09960 611 aaKnown RBP18.56■□□□□ 0.56
SMPD1-203ENST00000527275 SPNS2Q8IVW8 549 aa18.56■□□□□ 0.56
SMPD1-203ENST00000527275 PELI3Q8N2H9 469 aa18.56■□□□□ 0.56
SMPD1-203ENST00000527275 NUS1Q96E22 293 aa18.56■□□□□ 0.56
SMPD1-203ENST00000527275 UBXN10Q96LJ8 280 aa18.56■□□□□ 0.56
SMPD1-203ENST00000527275 NFKBIL1Q9UBC1 381 aaPredicted RBP18.56■□□□□ 0.56
SMPD1-203ENST00000527275 A0A1W2PQU0 124 aa18.55■□□□□ 0.56
SMPD1-203ENST00000527275 DLX3O60479 287 aa18.55■□□□□ 0.56
SMPD1-203ENST00000527275 HSPA4LO95757 839 aa18.55■□□□□ 0.56
SMPD1-203ENST00000527275 CXCL12P48061 93 aa18.55■□□□□ 0.56
SMPD1-203ENST00000527275 RPS21P63220 83 aaKnown RBP18.55■□□□□ 0.56
SMPD1-203ENST00000527275 ZNF284Q2VY69 593 aa18.55■□□□□ 0.56
SMPD1-203ENST00000527275 GPR33Q49SQ1 333 aa18.55■□□□□ 0.56
SMPD1-203ENST00000527275 KLC3Q6P597 504 aa18.55■□□□□ 0.56
SMPD1-203ENST00000527275 ANKRD49Q8WVL7 239 aa18.55■□□□□ 0.56
SMPD1-203ENST00000527275 KLHL29Q96CT2 875 aa18.55■□□□□ 0.56
SMPD1-203ENST00000527275 TCF12Q99081 682 aa18.55■□□□□ 0.56
SMPD1-203ENST00000527275 RASSF4Q9H2L5 321 aa18.55■□□□□ 0.56
SMPD1-203ENST00000527275 RAD18Q9NS91 495 aa18.55■□□□□ 0.56
SMPD1-203ENST00000527275 CRLS1Q9UJA2 301 aa18.55■□□□□ 0.56
SMPD1-203ENST00000527275 CYP8B1Q9UNU6 501 aa18.55■□□□□ 0.56
SMPD1-203ENST00000527275 PLXNA2O75051 1894 aa18.55■□□□□ 0.56
SMPD1-203ENST00000527275 TRBV5-4A0A0C4DH59 114 aa18.55■□□□□ 0.56
SMPD1-203ENST00000527275 CFAP73A6NFT4 308 aa18.55■□□□□ 0.56
SMPD1-203ENST00000527275 FADS2P1A8MWK0 482 aa18.55■□□□□ 0.56
SMPD1-203ENST00000527275 K7ESM1 405 aa18.55■□□□□ 0.56
SMPD1-203ENST00000527275 OR1I1O60431 355 aa18.55■□□□□ 0.56
SMPD1-203ENST00000527275 RNGTTO60942 597 aaKnown RBP18.55■□□□□ 0.56
SMPD1-203ENST00000527275 WISP3O95389 354 aaPredicted RBP18.55■□□□□ 0.56
SMPD1-203ENST00000527275 APBB3O95704 486 aa18.55■□□□□ 0.56
SMPD1-203ENST00000527275 PAK4O96013 591 aaPredicted RBP18.55■□□□□ 0.56
SMPD1-203ENST00000527275 FDXRP22570 491 aa18.55■□□□□ 0.56
SMPD1-203ENST00000527275 SLC26A3P40879 764 aa18.55■□□□□ 0.56
SMPD1-203ENST00000527275 TTPAP49638 278 aa18.55■□□□□ 0.56
SMPD1-203ENST00000527275 FGL2Q14314 439 aa18.55■□□□□ 0.56
SMPD1-203ENST00000527275 AARS2Q5JTZ9 985 aaKnown RBP18.55■□□□□ 0.56
SMPD1-203ENST00000527275 TMEM207Q6UWW9 146 aa18.55■□□□□ 0.56
SMPD1-203ENST00000527275 ALYREFQ86V81 257 aaKnown RBP18.55■□□□□ 0.56
SMPD1-203ENST00000527275 SERPINA9Q86WD7 417 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms